Sequence of DPV Rice dwarf virus
Rice dwarf virus structural core protein, segment 3, genomic RNA
ACC No: X54620
Dated: 2003-03-25 | Length: 3195 | CRC: -1566798986
!!NA_SEQUENCE 1.0 ID RDVSEG3A standard; RNA; VRL; 3195 BP. XX AC X54620; X17203; XX SV X54620.1 XX DT 09-NOV-1990 (Rel. 25, Created) DT 25-MAR-2003 (Rel. 75, Last updated, Version 3) XX DE Rice dwarf virus structural core protein, segment 3, genomic RNA XX KW segment 3; structural core protein. XX OS Rice dwarf virus OC Viruses; dsRNA viruses; Reoviridae; Phytoreovirus. XX RN [1] RP 1-3195 RA Suzuki N.; RT ; RL Submitted (16-FEB-1990) to the EMBL/GenBank/DDBJ databases. RL Suzuki N., Biotechnology Institute, Akita Prefectural College of RL Agriculture, Ohgata, Minami-Akita-Gun, Akita 010-04, Japan. XX RN [2] RX MEDLINE; 91021050. RX PUBMED; 2219733. RA Suzuki N., Watanabe Y., Kusano T., Kitagawa Y.; RT "Sequence analysis of the rice dwarf phytoreovirus segment S3 transcript RT encoding for the major structural core protein of 114 kDa"; RL Virology 179:455-459(1990). XX DR GOA; P22472; P22472. DR SWISS-PROT; P22472; VP3_RDVA. XX FH Key Location/Qualifiers FH FT source 1. .3195 FT /db_xref="taxon:10991" FT /organism="Rice dwarf virus" FT /clone_lib="RD" FT /clone="3RD" FT /isolate="A" FT /segment="3" FT CDS 39. .3098 FT /db_xref="GOA:P22472" FT /db_xref="SWISS-PROT:P22472" FT /product="structural core protein" FT /protein_id="CAA38440.1" FT /translation="MDSTGRAYDGASEFKSVLVTEGTSHYTPVEVYNILDELKTIKITS FT TIAEQSVVSRTPIPLSKIGLQDVKKLFDINVIKCGSSLRIVDEPQVTFIVSYAKDIYDK FT FMCIEHDSAYEPSLTMHRVRVIYSMLNDYCAKMISEVPYESSFVGELPVKSVTLNKLGD FT RNMDALAEHLLFEHDVVNAQRENRIFYQRKSAPAVPVIFGDDLEPAVRERANLYHRYSV FT PYHQIELALHALANDLLSIQYCHPTVVYNYLSSRAPNFLRLDDQVSLKLTSAGIGTLMP FT RPVVQLLDYDLVYMSPLALNNLASRLLRKISLHLVMQMVTAVQQDLGEVVSVSSNVTNP FT ASACLVRMNVQGVQTLAVFIAQSMLNPNISYGMISGLTLDCFSNFIYGACLMLFQALIP FT PSALTARQRLDINNRFAYFLIKCHATQATTARLVANQVIYPVDAIDQWQSNGRDVLVAI FT YNNLLPGELVLTNLIQTYFRGNTAQQAAEILIPADQTSYGANETRALSAPYLFGAPINM FT LAPDARLSTYKRDLALPDRSPILITTVEGQNSISIENLRHKTGLIRAMYLNGFVTQPPA FT WIRNANSNTALLSRFLDATPNLLGIYEAILANTYANAVNVYCDSVYRADIPIEWKLHQS FT VDPQDLLFGVFGIVPQYQILNEAVPDFFAGGEDILILQLIRAVYDTLSNKLGRNPADIF FT HLEEVFKVIEEIVSVLVQQKIDVRKYFTESMRSGSFSKPRWDNFLRRPVAQRLPNLYSV FT IMTQADHVYNYMTQLTHIIPITDCFYIVKNSGFVDRGSTGPVIASSSVYENVLKVVHTI FT ADFDAANALRLQRRRVDNTSYTDSLSDMFNGLRSISSSEFVRSVNGRSVFTEGRIDAIK FT VNMRAKFDLQFITEEGGYSKPPNVKKLMFSDFLSFLDSHKSDYRPPLLTVPITIGLNNL FT GETNSNTLRMRSEAIDEYFSSYVGAQILVPINVVDTRVYTEFSELRNFFTGDVVIRDDP FT FDVWDGVKATYIPIGVHGVRLDPNGDQPPL" XX SQ Sequence 3195 BP; 862 A; 681 C; 730 G; 922 T; 0 other; X54620 Length: 3195 April 1, 2003 09:30 Type: N Check: 977 .. 1 ggcaaaatcg agcgaacaat cctttatcct cgtgagctat ggacagtacc 51 ggccgagcat atgacggtgc gtctgaattc aaaagtgtcc ttgttaccga 101 gggtacttca cactacacac cagtggaagt atataacatc ctcgatgaat 151 tgaaaaccat taaaataacg tctaccatag ctgagcaatc tgtggtgtca 201 cgtactccaa ttcctctctc aaaaattggt ttacaagatg ttaagaaatt 251 gtttgacatt aatgtcataa aatgtggctc atctttgcgg atagtggacg 301 aacctcaagt tacgttcatt gtatcgtatg caaaggatat ctatgataaa 351 ttcatgtgca ttgaacatga ctccgcctac gagccgagtc taacgatgca 401 tagagtgcga gttatttact cgatgctcaa tgactattgt gcaaaaatga 451 tttcggaggt accctacgaa agtagctttg taggggagct ccctgtcaag 501 tcagtgactc taaataaact gggtgacaga aatatggatg ctttagctga 551 acatctcttg tttgagcacg acgttgtgaa tgcgcagcga gagaaccgga 601 ttttctatca aagaaagtcc gcgcctgctg tgccagtcat atttggagat 651 gacctggagc cggctgttcg tgaaagagct aacctctatc atcgatattc 701 ggttccgtat caccaaatcg agctggcatt gcatgcattg gcaaatgatt 751 tactatcaat acagtactgt cacccgacgg tagtgtataa ctatttgagt 801 tccagagctc caaactttct aaggttggat gatcaagtat cgctgaaact 851 aacatccgct gggataggta ctcttatgcc tagacctgtg gtacagctgc 901 ttgattatga tctagtctat atgtcaccgc tagccctgaa caatttggcc 951 tcccgattgt tgagaaagat atctttacac ttagtaatgc aaatggttac 1001 tgcagtgcaa caagatctgg gcgaagtggt gagtgtgtcc tccaacgtta 1051 ccaatcccgc cagcgcttgc ctggtaagga tgaacgttca gggggtccaa 1101 actttggctg tattcatagc ccagtccatg ttgaatccaa acatatctta 1151 tggtatgata tctggattaa cgcttgactg tttttcgaac ttcatttacg 1201 gcgcatgtct gatgttattt caagccctca ttccccccag tgctttgacg 1251 gctagacaga gattagacat aaataaccgt tttgcatact ttctaattaa 1301 gtgtcatgct actcaagcaa cgacagctag gcttgtcgcg aatcaggtca 1351 tttacccagt ggatgcaatt gatcagtggc agtctaatgg aagagacgtt 1401 ctggttgcaa tttataataa tttgctacca ggtgagttgg tattaaccaa 1451 tttaatacag acttacttta ggggtaacac tgcacagcaa gcggctgaaa 1501 tattgattcc tgcggaccag acttcttatg gcgccaatga gactcgtgct 1551 ctatcggcac cgtatctgtt tggagctcca atcaatatgc tcgccccaga 1601 tgctagattg tcaacgtata aacgcgatct tgctttgcct gaccgctccc 1651 caatactgat cacgacagta gaggggcaaa actcgatctc cattgaaaat 1701 ttgaggcata agacgggcct gatacgtgcc atgtatctaa atggcttcgt 1751 cacgcaacct ccggcgtgga ttcgtaatgc aaattcgaat actgcgctgc 1801 tttcacgatt ccttgatgct acgccgaact tattaggtat ttacgaagct 1851 attttagcta atacgtatgc caatgcggta aacgtttatt gcgattccgt 1901 ctaccgggca gatataccta ttgaatggaa gctgcaccaa tcagtagatc 1951 ctcaggattt gttgtttggt gtgtttggta ttgttccaca atatcaaatt 2001 ctgaatgaag cggttccgga tttcttcgct gggggtgagg atatcctaat 2051 actacagctc attcgagctg tgtatgatac tttgtcaaat aagcttggga 2101 ggaatcccgc tgacatattt catcttgaag aggtctttaa ggttatagaa 2151 gaaatagtgt cggtcttagt tcaacaaaag attgacgtca gaaagtattt 2201 cactgaaagt atgagaagtg gctcattctc aaaacccaga tgggataact 2251 ttctaaggcg tccagtcgct cagcgactac cgaacttata cagcgtcatc 2301 atgacgcagg cagatcatgt gtacaactac atgactcagc ttacccatat 2351 aataccaatt actgattgtt tctatatagt aaagaattca ggattcgtcg 2401 atcgaggctc gactggtcct gtgattgcat cctcatcagt ctatgaaaac 2451 gtgcttaagg tcgttcatac catagctgat tttgatgcag ctaatgcttt 2501 acgcctgcag aggagacgtg tagacaatac gtcttacact gactctcttt 2551 ctgacatgtt caatgggtta cggtctatca gttctagtga attcgttaga 2601 tccgtcaatg gtcgctcagt gtttactgaa ggacgcattg atgcaatcaa 2651 agtgaatatg cgagcgaaat tcgatttgca gtttatcact gaggagggcg 2701 gctactcaaa acctccaaat gtgaagaagc ttatgttttc ggactttctg 2751 agtttcttag atagtcataa gagcgattac aggccaccat tgcttactgt 2801 gccaatcacc ataggattaa ataacctggg tgaaactaat tcgaacacac 2851 tgcgtatgcg ttcggaggcg attgatgaat atttttcaag ttacgtcggt 2901 gcgcaaattt tggtaccgat taacgtcgta gacactcgag tctatactga 2951 attcagtgag ctacgaaatt tctttactgg tgatgtggtc attcgagatg 3001 acccatttga cgtctgggat ggcgtcaagg caacctacat cccgattggt 3051 gtgcatggag tccgcttgga tccgaatgga gatcagccgc ctctatgagc 3101 gcccggatgg catagctctg cgacgtgcga tgcagcgcaa acgaggacta 3151 ggctcccgag ggggctgaag tggattgttt tgcttggttc ctgat