Sequence of DPV Pothos latent virus
Pothos latent virus genes for replicase, capsid protein and movement protein
ACC No: X87115
Dated: 2005-04-18 | Length: 4415 | CRC: -58495865
!!NA_SEQUENCE 1.0 ID PLVRNARCM standard; genomic RNA; VRL; 4415 BP. XX AC X87115; XX SV X87115.1 XX DT 13-DEC-1995 (Rel. 46, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Pothos latent virus genes for replicase, capsid protein and movement DE protein XX KW capsid protein; movement protein; readthrough protein; replicase. XX OS Pothos latent virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Aureusvirus. XX RN [1] RX MEDLINE; 96068817. RX PUBMED; 7595391. RA Rubino L., Russo M., Martelli G.P.; RT "Sequence analysis of pothos latent virus genomic RNA"; RL J. Gen. Virol. 76:2835-2839(1995). XX RN [2] RP 1-4415 RA Russo M.; RT ; RL Submitted (09-MAY-1995) to the EMBL/GenBank/DDBJ databases. RL M. Russo, Centro Virus Virosi CNR Bari Italy, Via Amendola 165/A, I70126 RL Bari, ITALY XX CC Overlaps teh submitted by Russo M. Adv. Virus Res. CC 144:381-428,1994 XX FH Key Location/Qualifiers FH FT source 1. .4415 FT /db_xref="taxon:44562" FT /mol_type="genomic RNA" FT /organism="Pothos latent virus" FT CDS 141. .809 FT /db_xref="UniProt/TrEMBL:Q84830" FT /gene="orf" FT /function="unknown" FT /protein_id="CAA60595.1" FT /translation="MANWCVKVLMFPFVTVYTIVTSLGRGIRRGFRACVDEVENIYGDM FT CAGFRVALSKLSVSWIVVVGMIFVLNSLVVGLVPTLTMAAIIAACVGAKYGGRVPRYIR FT AHVDRIRKSWEKGVDDDDCCAPLPETSLERVPVKLRPRLACKIAVRAIAKVGLLKRSEA FT NSMVYQRVCLDVMESMKMRWHDRLVILPQAVLACLERPEEVEEVMKAIEASCKGPFDVY FT " FT CDS 141. .2363 FT /db_xref="GOA:Q84831" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR007095" FT /db_xref="UniProt/TrEMBL:Q84831" FT /note="readthrough stop codon" FT /transl_except=(pos:807. .809,aa:OTHER) FT /product="replicase" FT /protein_id="CAA60596.1" FT /translation="MANWCVKVLMFPFVTVYTIVTSLGRGIRRGFRACVDEVENIYGDM FT CAGFRVALSKLSVSWIVVVGMIFVLNSLVVGLVPTLTMAAIIAACVGAKYGGRVPRYIR FT AHVDRIRKSWEKGVDDDDCCAPLPETSLERVPVKLRPRLACKIAVRAIAKVGLLKRSEA FT NSMVYQRVCLDVMESMKMRWHDRLVILPQAVLACLERPEEVEEVMKAIEASCKGPFDVY FT XGCLLQHRGYNTAITSVIPDGVLLNHEGMVVRKGAPITNERRWYSFAGYASTYEYIVHN FT SSLVNVCRGLVERVFCVVRDGKLQRPLRPKNNVFERKLGNIGRKISSIVGYCPAMTRSE FT FCDSYSGTRRATYERARLSLDVLPCTRKDAYLKTFVKAEKINITLKPDPAPRVIQPRDP FT RINVEVGRYLKPLEPRLMKAIDKLWGEKTAIKGYTVEKVGEILHQKSLRFKNPCFVGLD FT ASRFDQHCSRQALEWEHSVYNAIFRDPYLSELLTWQIDNVGTAYLKDGFVRYRVDGCRM FT SGDMNTSMGNYLIMSCLVYQFCKDIGVDASLANCGDDCVLYLEKEDLPKLKALPDWFEK FT MGYSMKVEKPVFTVEEIEFCQQHPVQLSRGYVMVRRPDVCLTKDLLPFVRGGMTTERLQ FT RWLYAQHDGGLALAGDCPVLGAFYQRFPSGESHGELSEYSDAHKFKAGKQYGEITSLAR FT YSFWLAFGITPDEQLAIERDLMNWTPNVVLGSCDPRPTLLDYCSDN" FT CDS 2375. .3496 FT /db_xref="GOA:Q84832" FT /db_xref="HSSP:2TBV" FT /db_xref="InterPro:IPR000937" FT /db_xref="UniProt/TrEMBL:Q84832" FT /product="capsid protein" FT /protein_id="CAA60597.1" FT /translation="MALVKRNNNMALIASEAGKLAAIKAGQVMLSPAGRELIWNGVNWV FT RRKLGRSKKSDVILHPGVLPGAIAAPVANTRIIRASKPKFTRSKGSVTIAHRELLGQFN FT NSSGLVVNGGVSGNVYRINPSNPVVFPWLQGIAASFDQYKFDRVQLQYVPMCATTETGR FT VAIYFDKDSQDVEPADRDELAIMAHLTESAPWCESTLSIPVDNIKRFMNDNTTTDPKLV FT DLGQIGLATYGGGSTNPVGDLFIHYTITLFEPQPLASLVETEQTGTGAAPFGANLVTVS FT SNATITIYTFEGPGVYLLALSQRAASFTTFVTAGGAVVNSHTTTITSGPAYQSICEYYC FT CYTWGSITYNGTLFGNYTLQVTRAKISNNATLI" FT CDS 3591. .4319 FT /db_xref="GOA:Q84833" FT /db_xref="InterPro:IPR005332" FT /db_xref="UniProt/TrEMBL:Q84833" FT /product="movement protein" FT /protein_id="CAA60598.1" FT /translation="MEIQSLDGILGEELAIQNEVKKILLSHKTTKAILPLAPISQFSKW FT KIPKQGFYAPIDVKFVLTPHISERAQVRGVVKLVDSRDLSPSRELYRSKEFNIGHGLVI FT EGSQLPFCLPVGDYPLQFEVTVLQSQFRETANLYSTSVEWRMMSSTTPLSRVRSVMGAA FT QQPAMKLQPNFKMSLESSKGGGMKSHQKKNSKPNGHSRRGNLSGEVGGSSSSLPSGAQT FT GEWIDNDYGDSLSEYSGVSA" FT CDS 3722. .4114 FT /db_xref="UniProt/TrEMBL:Q84834" FT /gene="orf" FT /function="unknown" FT /protein_id="CAA60599.1" FT /translation="MENSQTGVLCPNRCQVCSHTTYIRESSGQGGRQACRFTRFVTQPR FT VVSEQGIQYRSWLSDRGFPITLLSTSGGLSTTIRGHGVAITIQGDSKSLLNFCRVAYDV FT FHHPVVQSEVCHGSGPATSDEITTKF" XX SQ Sequence 4415 BP; 1129 A; 937 C; 1143 G; 1206 T; 0 other; X87115 Length: 4415 May 10, 2005 10:10 Type: N Check: 9736 .. 1 agaataacta ctataagcct aaccagcttg ttgagagttg tggagccatc 51 catatagtta ttctctcgct cagcttttgt tgtgtgggtt tgaaggacca 101 gtctatcact ttgtgaggat aaattgtaac tgtggtcaaa atggcgaatt 151 ggtgtgtgaa agttcttatg tttcctttcg ttactgttta cacgattgtg 201 acttcccttg ggcggggcat tcgacgcggc tttcgagcct gtgtggatga 251 agttgagaac atctatggag acatgtgtgc tggattcagg gttgccctga 301 gcaaacttag tgtctcctgg atagttgtcg tgggcatgat atttgttctt 351 aacagtctcg tggtaggcct cgttcctacc ctgaccatgg ctgctattat 401 tgcggcctgt gtcggggcaa agtacggggg tcgtgttcca cgatacattc 451 gggcccatgt ggacagaata cgaaaatcct gggagaaagg ggtagatgac 501 gatgactgtt gtgctccgtt acctgaaaca tccctcgaga gggtgcccgt 551 taagcttagg cctagactag cttgtaagat tgctgttagg gccatagcca 601 aggtggggct acttaagagg agtgaggcca actccatggt ttaccagaga 651 gtgtgcctcg atgtcatgga aagcatgaaa atgcggtggc acgacaggct 701 cgtcatcctc cctcaagcgg ttcttgcttg cctggagagg ccagaggaag 751 tcgaagaagt catgaaagcc attgaggcgt cctgcaaggg accgtttgat 801 gtctactagg ggtgcctatt acaacaccgt ggttataaca ctgccatcac 851 tagcgtcata ccagatggag tgttattgaa ccacgaaggg atggtggtac 901 gtaaaggagc ccctatcacc aatgaacgaa gatggtactc atttgctggg 951 tatgccagta cctacgagta cattgtgcat aattcatcac ttgtcaacgt 1001 ttgtcgtggt ttagttgaac gagtgttttg cgtcgtgcga gacggtaaat 1051 tgcagcgacc tctgcgcccc aaaaataatg tttttgagag gaagcttggt 1101 aatattggtc gtaaaatcag ctcaattgtt gggtactgcc ccgctatgac 1151 acgcagtgaa ttctgtgatt cttatagcgg cacgcgacgt gccacgtatg 1201 agcgagcaag attgtccttg gatgttctcc cctgtacccg caaagatgct 1251 tatctgaaga cttttgttaa ggcggagaag atcaatatta cacttaaacc 1301 cgaccccgca ccccgggtca ttcagccacg tgaccccagg atcaatgtgg 1351 aagtgggacg ttacttgaag cctcttgaac ccagattgat gaaggctatt 1401 gataaattat ggggggaaaa gacggcaatt aagggataca cagttgagaa 1451 ggttggggag atcttacacc agaaatcact taggtttaag aacccatgct 1501 ttgttggtct tgacgcttca cgttttgacc agcactgttc caggcaggca 1551 cttgagtggg aacattcagt gtacaatgcc attttccggg atccttactt 1601 atccgaactg ttgacttggc agattgacaa tgttggtact gcttatctaa 1651 aagatgggtt tgtgaggtat cgtgtagatg gttgccgtat gtctggggac 1701 atgaacacta gcatgggtaa ttacctcatc atgtcttgtt tggtctacca 1751 gttttgtaag gacattggcg ttgacgctag tcttgccaat tgtggtgatg 1801 actgtgtact ctatttggag aaggaggacc tacctaagct gaaggcacta 1851 cctgattggt ttgaaaagat ggggtattct atgaaggtgg aaaaacccgt 1901 ctttaccgtt gaggaaattg agttttgcca acaacacccc gtgcagctta 1951 gtagaggtta tgtaatggtt aggcggccag acgtctgttt gacaaaagat 2001 ttgttgccgt ttgtccgtgg aggtatgaca acggagagac tccagcgttg 2051 gttgtatgct caacacgatg gtggattggc ccttgcgggt gattgccctg 2101 tgttgggagc gttttaccaa cgttttccca gtggtgagtc ccatggggag 2151 ttgtctgaat attctgacgc acataagttt aaggccggta agcagtatgg 2201 agaaatcaca agtcttgctc gttatagttt ctggttggcc ttcggcatca 2251 cgccggatga gcaacttgct atagagcgcg acctaatgaa ttggactccc 2301 aatgtggtgc ttggttcttg tgacccacgg cccacattgt tggactactg 2351 ctcagataac tgaccattat caccatggca ctcgtgaaac gaaataataa 2401 tatggcgttg attgcttccg aagcagggaa gttagcagct attaaagctg 2451 gacaagttat gcttagtcca gcgggaagag aattgatttg gaatggcgtg 2501 aattgggttc gacggaagtt agggagatct aagaagtcag atgttattct 2551 ccacccaggt gttttaccag gtgccattgc tgcgcctgta gctaataccc 2601 ggatcatcag agcatccaag cctaagttca cacgtagcaa gggatctgta 2651 actattgccc atcgtgagtt gttaggacaa ttcaataact cctcggggct 2701 tgtggtaaat gggggcgttt ctggtaatgt gtacaggatt aatcctagta 2751 acccagtcgt cttcccatgg ttgcaaggga tagccgctag ttttgatcaa 2801 tataagttcg atagggtaca gctacaatat gttcccatgt gtgccaccac 2851 tgaaacaggc agagtagcaa tctacttcga taaggactca caagatgttg 2901 aacctgcaga tcgggatgaa ttggcaatca tggcccattt gacagaaagt 2951 gcaccatggt gtgagagcac ccttagtata cctgttgaca acataaagcg 3001 gtttatgaac gacaacacca caactgaccc aaagctcgtg gatcttggac 3051 agattgggtt agcaacatat ggaggtggaa gcacgaatcc tgttggtgat 3101 ctctttatac actacacaat taccttgttc gaaccacaac cactagctag 3151 cttggtagag acagagcaga ccggcactgg tgcggcacct tttggtgcca 3201 atcttgtgac agtttctagt aacgcgacga tcaccatcta cacctttgaa 3251 ggtcctggtg tgtatctgtt agctttgtca caacgtgcag cctcttttac 3301 cacgtttgtt actgctggtg gtgctgttgt caattcacac acgactacta 3351 ttacctctgg accagcgtac caatcaattt gcgaatatta ctgctgctat 3401 acctgggggt ccataactta caatggtaca ttgtttggaa attacacact 3451 ccaggttacc cgggccaaaa tttctaacaa cgcaactttg atatgagtga 3501 ccatgcttgg gtgcgaaagt aggatggagg aatgatacct ggcaatgtct 3551 gggttgacca cttagtggct taagaagtct gaccagcttt atggaaatac 3601 aatctcttga cggaatactg ggtgaagaac ttgccataca gaacgaagtc 3651 aagaaaatac tgttgagtca taaaactacc aaagccatac taccattagc 3701 gcccatctca caattctcta aatggaaaat tcccaaacag gggttttatg 3751 ccccaataga tgtcaagttt gttctcacac cacatatatc agagagagct 3801 caggtcaggg gggtcgtcaa gcttgtcgat tcacgcgatt tgtcacccag 3851 ccgcgagttg tatcggagca aggaattcaa tatcggtcat ggcttagtga 3901 tcgagggttc ccaattaccc ttctgtctac cagtggggga ttatccacta 3951 caattcgagg tcacggtgtt gcaatcacaa ttcagggaga cagcaaatct 4001 ctactcaact tctgtcgagt ggcgtatgat gtcttccacc accccgttgt 4051 ccagagtgag gtctgtcatg ggagcggccc agcaaccagc gatgaaatta 4101 caaccaaatt ttaagatgtc gctggaatca tccaagggcg gtggcatgaa 4151 gtcacatcag aagaaaaata gtaagcctaa tggccatagt aggaggggta 4201 atctatctgg ggaagttggt ggttcttctt cctccttgcc ctcaggtgca 4251 cagactgggg agtggataga taatgactat ggagacagct tatctgagta 4301 ttctggtgtg tcagcatagc acaccccagg tgtcataccc tgaagtttag 4351 taaggggggc tataaatgac gcttggtttt acctgaaatc ccttccatgc 4401 tttgcatggt agccc