Sequence of DPV Pothos latent virus
Pothos latent virus genes for replicase, capsid protein and movement protein
ACC No: X87115
Dated: 2005-04-18 | Length: 4415 | CRC: -58495865
!!NA_SEQUENCE 1.0
ID PLVRNARCM standard; genomic RNA; VRL; 4415 BP.
XX
AC X87115;
XX
SV X87115.1
XX
DT 13-DEC-1995 (Rel. 46, Created)
DT 18-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Pothos latent virus genes for replicase, capsid protein and movement
DE protein
XX
KW capsid protein; movement protein; readthrough protein; replicase.
XX
OS Pothos latent virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Aureusvirus.
XX
RN [1]
RX MEDLINE; 96068817.
RX PUBMED; 7595391.
RA Rubino L., Russo M., Martelli G.P.;
RT "Sequence analysis of pothos latent virus genomic RNA";
RL J. Gen. Virol. 76:2835-2839(1995).
XX
RN [2]
RP 1-4415
RA Russo M.;
RT ;
RL Submitted (09-MAY-1995) to the EMBL/GenBank/DDBJ databases.
RL M. Russo, Centro Virus Virosi CNR Bari Italy, Via Amendola 165/A, I70126
RL Bari, ITALY
XX
CC Overlaps teh submitted by Russo M. Adv. Virus Res.
CC 144:381-428,1994
XX
FH Key Location/Qualifiers
FH
FT source 1. .4415
FT /db_xref="taxon:44562"
FT /mol_type="genomic RNA"
FT /organism="Pothos latent virus"
FT CDS 141. .809
FT /db_xref="UniProt/TrEMBL:Q84830"
FT /gene="orf"
FT /function="unknown"
FT /protein_id="CAA60595.1"
FT /translation="MANWCVKVLMFPFVTVYTIVTSLGRGIRRGFRACVDEVENIYGDM
FT CAGFRVALSKLSVSWIVVVGMIFVLNSLVVGLVPTLTMAAIIAACVGAKYGGRVPRYIR
FT AHVDRIRKSWEKGVDDDDCCAPLPETSLERVPVKLRPRLACKIAVRAIAKVGLLKRSEA
FT NSMVYQRVCLDVMESMKMRWHDRLVILPQAVLACLERPEEVEEVMKAIEASCKGPFDVY
FT "
FT CDS 141. .2363
FT /db_xref="GOA:Q84831"
FT /db_xref="InterPro:IPR002166"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR007095"
FT /db_xref="UniProt/TrEMBL:Q84831"
FT /note="readthrough stop codon"
FT /transl_except=(pos:807. .809,aa:OTHER)
FT /product="replicase"
FT /protein_id="CAA60596.1"
FT /translation="MANWCVKVLMFPFVTVYTIVTSLGRGIRRGFRACVDEVENIYGDM
FT CAGFRVALSKLSVSWIVVVGMIFVLNSLVVGLVPTLTMAAIIAACVGAKYGGRVPRYIR
FT AHVDRIRKSWEKGVDDDDCCAPLPETSLERVPVKLRPRLACKIAVRAIAKVGLLKRSEA
FT NSMVYQRVCLDVMESMKMRWHDRLVILPQAVLACLERPEEVEEVMKAIEASCKGPFDVY
FT XGCLLQHRGYNTAITSVIPDGVLLNHEGMVVRKGAPITNERRWYSFAGYASTYEYIVHN
FT SSLVNVCRGLVERVFCVVRDGKLQRPLRPKNNVFERKLGNIGRKISSIVGYCPAMTRSE
FT FCDSYSGTRRATYERARLSLDVLPCTRKDAYLKTFVKAEKINITLKPDPAPRVIQPRDP
FT RINVEVGRYLKPLEPRLMKAIDKLWGEKTAIKGYTVEKVGEILHQKSLRFKNPCFVGLD
FT ASRFDQHCSRQALEWEHSVYNAIFRDPYLSELLTWQIDNVGTAYLKDGFVRYRVDGCRM
FT SGDMNTSMGNYLIMSCLVYQFCKDIGVDASLANCGDDCVLYLEKEDLPKLKALPDWFEK
FT MGYSMKVEKPVFTVEEIEFCQQHPVQLSRGYVMVRRPDVCLTKDLLPFVRGGMTTERLQ
FT RWLYAQHDGGLALAGDCPVLGAFYQRFPSGESHGELSEYSDAHKFKAGKQYGEITSLAR
FT YSFWLAFGITPDEQLAIERDLMNWTPNVVLGSCDPRPTLLDYCSDN"
FT CDS 2375. .3496
FT /db_xref="GOA:Q84832"
FT /db_xref="HSSP:2TBV"
FT /db_xref="InterPro:IPR000937"
FT /db_xref="UniProt/TrEMBL:Q84832"
FT /product="capsid protein"
FT /protein_id="CAA60597.1"
FT /translation="MALVKRNNNMALIASEAGKLAAIKAGQVMLSPAGRELIWNGVNWV
FT RRKLGRSKKSDVILHPGVLPGAIAAPVANTRIIRASKPKFTRSKGSVTIAHRELLGQFN
FT NSSGLVVNGGVSGNVYRINPSNPVVFPWLQGIAASFDQYKFDRVQLQYVPMCATTETGR
FT VAIYFDKDSQDVEPADRDELAIMAHLTESAPWCESTLSIPVDNIKRFMNDNTTTDPKLV
FT DLGQIGLATYGGGSTNPVGDLFIHYTITLFEPQPLASLVETEQTGTGAAPFGANLVTVS
FT SNATITIYTFEGPGVYLLALSQRAASFTTFVTAGGAVVNSHTTTITSGPAYQSICEYYC
FT CYTWGSITYNGTLFGNYTLQVTRAKISNNATLI"
FT CDS 3591. .4319
FT /db_xref="GOA:Q84833"
FT /db_xref="InterPro:IPR005332"
FT /db_xref="UniProt/TrEMBL:Q84833"
FT /product="movement protein"
FT /protein_id="CAA60598.1"
FT /translation="MEIQSLDGILGEELAIQNEVKKILLSHKTTKAILPLAPISQFSKW
FT KIPKQGFYAPIDVKFVLTPHISERAQVRGVVKLVDSRDLSPSRELYRSKEFNIGHGLVI
FT EGSQLPFCLPVGDYPLQFEVTVLQSQFRETANLYSTSVEWRMMSSTTPLSRVRSVMGAA
FT QQPAMKLQPNFKMSLESSKGGGMKSHQKKNSKPNGHSRRGNLSGEVGGSSSSLPSGAQT
FT GEWIDNDYGDSLSEYSGVSA"
FT CDS 3722. .4114
FT /db_xref="UniProt/TrEMBL:Q84834"
FT /gene="orf"
FT /function="unknown"
FT /protein_id="CAA60599.1"
FT /translation="MENSQTGVLCPNRCQVCSHTTYIRESSGQGGRQACRFTRFVTQPR
FT VVSEQGIQYRSWLSDRGFPITLLSTSGGLSTTIRGHGVAITIQGDSKSLLNFCRVAYDV
FT FHHPVVQSEVCHGSGPATSDEITTKF"
XX
SQ Sequence 4415 BP; 1129 A; 937 C; 1143 G; 1206 T; 0 other;
X87115 Length: 4415 May 10, 2005 10:10 Type: N Check: 9736 ..
1 agaataacta ctataagcct aaccagcttg ttgagagttg tggagccatc
51 catatagtta ttctctcgct cagcttttgt tgtgtgggtt tgaaggacca
101 gtctatcact ttgtgaggat aaattgtaac tgtggtcaaa atggcgaatt
151 ggtgtgtgaa agttcttatg tttcctttcg ttactgttta cacgattgtg
201 acttcccttg ggcggggcat tcgacgcggc tttcgagcct gtgtggatga
251 agttgagaac atctatggag acatgtgtgc tggattcagg gttgccctga
301 gcaaacttag tgtctcctgg atagttgtcg tgggcatgat atttgttctt
351 aacagtctcg tggtaggcct cgttcctacc ctgaccatgg ctgctattat
401 tgcggcctgt gtcggggcaa agtacggggg tcgtgttcca cgatacattc
451 gggcccatgt ggacagaata cgaaaatcct gggagaaagg ggtagatgac
501 gatgactgtt gtgctccgtt acctgaaaca tccctcgaga gggtgcccgt
551 taagcttagg cctagactag cttgtaagat tgctgttagg gccatagcca
601 aggtggggct acttaagagg agtgaggcca actccatggt ttaccagaga
651 gtgtgcctcg atgtcatgga aagcatgaaa atgcggtggc acgacaggct
701 cgtcatcctc cctcaagcgg ttcttgcttg cctggagagg ccagaggaag
751 tcgaagaagt catgaaagcc attgaggcgt cctgcaaggg accgtttgat
801 gtctactagg ggtgcctatt acaacaccgt ggttataaca ctgccatcac
851 tagcgtcata ccagatggag tgttattgaa ccacgaaggg atggtggtac
901 gtaaaggagc ccctatcacc aatgaacgaa gatggtactc atttgctggg
951 tatgccagta cctacgagta cattgtgcat aattcatcac ttgtcaacgt
1001 ttgtcgtggt ttagttgaac gagtgttttg cgtcgtgcga gacggtaaat
1051 tgcagcgacc tctgcgcccc aaaaataatg tttttgagag gaagcttggt
1101 aatattggtc gtaaaatcag ctcaattgtt gggtactgcc ccgctatgac
1151 acgcagtgaa ttctgtgatt cttatagcgg cacgcgacgt gccacgtatg
1201 agcgagcaag attgtccttg gatgttctcc cctgtacccg caaagatgct
1251 tatctgaaga cttttgttaa ggcggagaag atcaatatta cacttaaacc
1301 cgaccccgca ccccgggtca ttcagccacg tgaccccagg atcaatgtgg
1351 aagtgggacg ttacttgaag cctcttgaac ccagattgat gaaggctatt
1401 gataaattat ggggggaaaa gacggcaatt aagggataca cagttgagaa
1451 ggttggggag atcttacacc agaaatcact taggtttaag aacccatgct
1501 ttgttggtct tgacgcttca cgttttgacc agcactgttc caggcaggca
1551 cttgagtggg aacattcagt gtacaatgcc attttccggg atccttactt
1601 atccgaactg ttgacttggc agattgacaa tgttggtact gcttatctaa
1651 aagatgggtt tgtgaggtat cgtgtagatg gttgccgtat gtctggggac
1701 atgaacacta gcatgggtaa ttacctcatc atgtcttgtt tggtctacca
1751 gttttgtaag gacattggcg ttgacgctag tcttgccaat tgtggtgatg
1801 actgtgtact ctatttggag aaggaggacc tacctaagct gaaggcacta
1851 cctgattggt ttgaaaagat ggggtattct atgaaggtgg aaaaacccgt
1901 ctttaccgtt gaggaaattg agttttgcca acaacacccc gtgcagctta
1951 gtagaggtta tgtaatggtt aggcggccag acgtctgttt gacaaaagat
2001 ttgttgccgt ttgtccgtgg aggtatgaca acggagagac tccagcgttg
2051 gttgtatgct caacacgatg gtggattggc ccttgcgggt gattgccctg
2101 tgttgggagc gttttaccaa cgttttccca gtggtgagtc ccatggggag
2151 ttgtctgaat attctgacgc acataagttt aaggccggta agcagtatgg
2201 agaaatcaca agtcttgctc gttatagttt ctggttggcc ttcggcatca
2251 cgccggatga gcaacttgct atagagcgcg acctaatgaa ttggactccc
2301 aatgtggtgc ttggttcttg tgacccacgg cccacattgt tggactactg
2351 ctcagataac tgaccattat caccatggca ctcgtgaaac gaaataataa
2401 tatggcgttg attgcttccg aagcagggaa gttagcagct attaaagctg
2451 gacaagttat gcttagtcca gcgggaagag aattgatttg gaatggcgtg
2501 aattgggttc gacggaagtt agggagatct aagaagtcag atgttattct
2551 ccacccaggt gttttaccag gtgccattgc tgcgcctgta gctaataccc
2601 ggatcatcag agcatccaag cctaagttca cacgtagcaa gggatctgta
2651 actattgccc atcgtgagtt gttaggacaa ttcaataact cctcggggct
2701 tgtggtaaat gggggcgttt ctggtaatgt gtacaggatt aatcctagta
2751 acccagtcgt cttcccatgg ttgcaaggga tagccgctag ttttgatcaa
2801 tataagttcg atagggtaca gctacaatat gttcccatgt gtgccaccac
2851 tgaaacaggc agagtagcaa tctacttcga taaggactca caagatgttg
2901 aacctgcaga tcgggatgaa ttggcaatca tggcccattt gacagaaagt
2951 gcaccatggt gtgagagcac ccttagtata cctgttgaca acataaagcg
3001 gtttatgaac gacaacacca caactgaccc aaagctcgtg gatcttggac
3051 agattgggtt agcaacatat ggaggtggaa gcacgaatcc tgttggtgat
3101 ctctttatac actacacaat taccttgttc gaaccacaac cactagctag
3151 cttggtagag acagagcaga ccggcactgg tgcggcacct tttggtgcca
3201 atcttgtgac agtttctagt aacgcgacga tcaccatcta cacctttgaa
3251 ggtcctggtg tgtatctgtt agctttgtca caacgtgcag cctcttttac
3301 cacgtttgtt actgctggtg gtgctgttgt caattcacac acgactacta
3351 ttacctctgg accagcgtac caatcaattt gcgaatatta ctgctgctat
3401 acctgggggt ccataactta caatggtaca ttgtttggaa attacacact
3451 ccaggttacc cgggccaaaa tttctaacaa cgcaactttg atatgagtga
3501 ccatgcttgg gtgcgaaagt aggatggagg aatgatacct ggcaatgtct
3551 gggttgacca cttagtggct taagaagtct gaccagcttt atggaaatac
3601 aatctcttga cggaatactg ggtgaagaac ttgccataca gaacgaagtc
3651 aagaaaatac tgttgagtca taaaactacc aaagccatac taccattagc
3701 gcccatctca caattctcta aatggaaaat tcccaaacag gggttttatg
3751 ccccaataga tgtcaagttt gttctcacac cacatatatc agagagagct
3801 caggtcaggg gggtcgtcaa gcttgtcgat tcacgcgatt tgtcacccag
3851 ccgcgagttg tatcggagca aggaattcaa tatcggtcat ggcttagtga
3901 tcgagggttc ccaattaccc ttctgtctac cagtggggga ttatccacta
3951 caattcgagg tcacggtgtt gcaatcacaa ttcagggaga cagcaaatct
4001 ctactcaact tctgtcgagt ggcgtatgat gtcttccacc accccgttgt
4051 ccagagtgag gtctgtcatg ggagcggccc agcaaccagc gatgaaatta
4101 caaccaaatt ttaagatgtc gctggaatca tccaagggcg gtggcatgaa
4151 gtcacatcag aagaaaaata gtaagcctaa tggccatagt aggaggggta
4201 atctatctgg ggaagttggt ggttcttctt cctccttgcc ctcaggtgca
4251 cagactgggg agtggataga taatgactat ggagacagct tatctgagta
4301 ttctggtgtg tcagcatagc acaccccagg tgtcataccc tgaagtttag
4351 taaggggggc tataaatgac gcttggtttt acctgaaatc ccttccatgc
4401 tttgcatggt agccc