Sequence of DPV Arabidopsis thaliana Art1 virus

A.thaliana lectin receptor kinase gene

ACC No: Y08010

Dated: 1999-02-04 | Length: 4793 | CRC: -806334193

                !!NA_SEQUENCE 1.0
ID   ATLECRECK  standard; genomic DNA; PLN; 4793 BP.
XX
AC   Y08010;
XX
SV   Y08010.1
XX
DT   08-JAN-1997 (Rel. 50, Created)
DT   04-FEB-1999 (Rel. 58, Last updated, Version 3)
XX
DE   A.thaliana lectin receptor kinase gene
XX
KW   Art1; copia-like element; lectin receptor kinase; transposable element.
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicots; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RA   Herve C., Serres J., Dabos P., Lescure B.;
RT   "Nucleotide sequence of DNA art1 (accession no. Y08010), a new Arabidopsis
RT   copia-like transposable element, disrupts a lectin receptor kinase gene in
RT   the columbia ecotype (PGR97-059)";
RL   Plant Physiol. 113:1464-1464(1997).
XX
RN   [2]
RP   1-4793
RA   Herve C.;
RT   ;
RL   Submitted (13-SEP-1996) to the EMBL/GenBank/DDBJ databases.
RL   C. Herve, INRA-CNRS, LBMRPM, Chemin De Borde Rouge Bp27, Castanet-Tolosan
RL   Cedex, 31326, FRANCE
XX
CC   Overlaps with Y08020
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .4793
FT                   /db_xref="taxon:3702"
FT                   /mol_type="genomic DNA"
FT                   /organism="Arabidopsis thaliana"
FT                   /clone_lib="L6B"
FT                   /lab_host="EMBL-3 CLONTECH"
FT                   /sub_species="Columbia"
FT   LTR             1. .439
FT                   /note="Art1 transposable element"
FT   CDS             <423. .>2054
FT                   /codon_start=1
FT                   /product="lectin receptor kinase"
FT                   /protein_id="CAA69271.1"
FT                   /translation="KNFTLTKWYQSLKILKMASNNVPFQVPVLTKSNYDNWSLRMKAIL
FT                   GAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEA
FT                   TSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKR
FT                   NGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKKKKKED
FT                   IVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRPHEDNTNQRGENSSRGR
FT                   GKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFKEKANYVEEKIQEEDMLLMASY
FT                   KKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRL
FT                   KNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKN
FT                   RMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQV
FT                   CEGCLLGNQFKMSFPKESSSRAQKPLS"
FT   CDS             <1979. .>3847
FT                   /codon_start=1
FT                   /product="lectin receptor kinase"
FT                   /protein_id="CAA69272.1"
FT                   /translation="RMSTWKPIQNELSKRVKFKSTKTVELIHTDVCGPIKPKSLGKSNY
FT                   FLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFL
FT                   KYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYL
FT                   LNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGY
FT                   DNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEPP
FT                   SEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQE
FT                   AIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARL
FT                   VAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVY
FT                   IEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI
FT                   QKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI
FT                   FITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTNL"
FT   CDS             <3714. .>4364
FT                   /codon_start=1
FT                   /product="lectin receptor kinase"
FT                   /protein_id="CAA69273.1"
FT                   /translation="LKKAMLRRYLRSSRWMTQIPFVHQWNAESNYQRKKKGKEWIQLTF
FT                   KSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTT
FT                   SDYKLVVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHY
FT                   IRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKSSLRGGVES"
FT   LTR             4354. .4793
FT                   /note="Art1 transposable element"
XX
SQ   Sequence 4793 BP; 1742 A; 792 C; 1004 G; 1255 T; 0 other;

   Y08010  Length: 4793  May 9, 2005 17:26  Type: N  Check: 6779  ..

       1  tgttgaaagt taaacttgat tttgaatcaa gtttaattat tggatcaatt
      51  atccaataat taattatggc caaatccaag ttctagagtt ttctctagaa
     101  atatcatcat ttccacctcc ttaaaggatt ctagaaattt tctagaatca
     151  tcttccacct ccttaaacat aaaaatctag atactctaat agaataatct
     201  agataatttg aataatgtaa tctagatctt atgtaagaac tctctagact
     251  taagattaaa atattttaga tattttgtag tttggaggct ataaatacct
     301  cctccccctc tcaaatgttg taatgttgtg aagttgtatt caagtttaaa
     351  gcaaagtaat aaaagttcta tttcctaaaa aactctctca aaacacttaa
     401  acactttctc cattacctct aaaagaattt tactctaaca aagtggtatc
     451  agagcttgaa gatcctaaag atggcgagta acaatgttcc cttccaagtc
     501  ccggtgctca caaagagcaa ctatgataat tggagtctac gaatgaaggc
     551  tatcctagga gcacatgacg tgtgggagat agtcgagaaa ggtttcattg
     601  aaccggagaa tgaaggtagt ctttctcaaa ctcaaaaaga tggtttgaga
     651  gactcaagaa agagagacaa gaaagctctc tgtctaatct atcaaggatt
     701  agatgaagat acgttcgaga aggtcgttga agctacgtcg gcgaaagaag
     751  catgggagaa gcttcgaacc tcttacaaag gtgccgatca agtcaagaaa
     801  gtacgtcttc aaactctaag aggagaattt gaagcactac aaatgaagga
     851  aggtgaactc gtctccgatt acttctcaag agtgttgacg gttactaata
     901  accttaaaag aaacggagag aagctagatg atgtgagaat catggagaaa
     951  gttcttagat cattggatct aaaatttgag catattgtca ccgtcattga
    1001  agaaacaaaa gatttagaag ctatgacaat agagcaactt cttgggtcat
    1051  tacaagctta tgaagaaaag aagaagaaga aagaagatat cgtcgaacaa
    1101  gtcctcaata tgcaaattac aaaagaagaa aacggccaaa gttaccaaag
    1151  aagaggtggt ggtcaagttc gaggacgagg tcgtggtgga tatggaaatg
    1201  gacgtggttg gaggccacat gaagacaaca caaaccaaag aggtgaaaac
    1251  tcatcaagag gtcgtgggaa aggacaccca aaatcaagat acgataaatc
    1301  aagtgtcaaa tgctacaatt gcgggaagtt tggacattat gcttctgaat
    1351  gtaaagctcc tagcaacaaa aaatttaagg agaaggccaa ctacgttgaa
    1401  gaaaaaattc aagaagaaga catgttatta atggctagct acaagaaaga
    1451  tgaacaagaa gagaatcata agtggtacct cgatagtggt gcaagtaatc
    1501  acatgtgcgg gagaaaaagt atgttcgcgg agcttgatga atcggtgaga
    1551  ggaaatgtgg ctttaggaga tgaatcgaag atggaggtaa aaggtaaagg
    1601  aaacattctc attcgattga agaatggaga tcatcaattt atttccaacg
    1651  tttactatat tccgagcatg aagacaaaca tcttgagcct tggacaactc
    1701  ttagagaaag gttatgatat tagattaaaa gataataacc tttcaataag
    1751  agacaaagaa agcaatctca ttaccaaggt gccaatgtcg aaaaatagaa
    1801  tgtttgtcct caacattcga aatgacattg cacaatgtct taagatgtgt
    1851  tacaaagagg agtcttggct atggcatctt cgattcggac atctaaattt
    1901  tggaggattg gagttgcttt caaggaagga aatggtgaga gggctacctt
    1951  gtataaatca tccaaatcaa gtgtgtgaag gatgtctact tggaaaccaa
    2001  ttcaaaatga gctttccaaa agagtcaagt tcaagagcac aaaaaccgtt
    2051  gagctaatac acaccgatgt gtgtggtccg atcaagccga aatcacttgg
    2101  taaaagtaat tacttccttc tctttattga tgatttttca agaaaaacat
    2151  gggtatattt tttgaaagaa aaatccgagg tgttcgaaat tttcaaaaag
    2201  tttaaagccc atgttgagaa ggagagtggt cttgtgatca aaaccatgag
    2251  atccgacagt ggaggagaat ttacatccaa ggagtttctt aagtattgtg
    2301  aagacaacgg cattcgaaga caattaacgg tgccaagatc ccctcaacaa
    2351  aatggtgtag cggaaagaaa gaatagaaca attcttgaga tggcaaggag
    2401  catgctcaaa agtaagagac taccaaaaga gttgtgggcg gaagcggtcg
    2451  cgtgtgcggt ttatctatta aatcgatctc caacaaaaag tgtctccgga
    2501  aaaacaccac aagaagcttg gagcggaaga aagcccggtg tttctcattt
    2551  aagagtcttt ggaagtattg ctcatgctca tgtaccggat gagaagcgga
    2601  acaaactaga tgacaaaagt gagaagtata tcttcattgg ttatgataac
    2651  aactccaaag gctacaagct ctataatccc gatacgaaga agacaattat
    2701  tagtcgaaat atagtgttcg atgaagaagg agaatgggat tggaactcaa
    2751  atgaagaaga ttataacttc tttccacatt ttgaagaaga taagccggag
    2801  ccaacaagag aggagccacc aagtgaagag cctactacac caccaacttc
    2851  accaacaagt tctcaaatag aagaaagttc gagtgaaagg actccgcgtt
    2901  ttagaagtat acaagagctc tatgaggtaa ccgaaaatca agaaaacctt
    2951  accttatttt gtttatttgc ggagtgcgaa cccatggatt tccaagaagc
    3001  cattgaaaag aagacttgga gaaatgccat ggatgaagag atcaaatcaa
    3051  tacaaaagaa tgacacatgg gagttaactt cacttccaaa tggacacaag
    3101  gcaattggcg tgaagtgggt gtataaagca aagaaaaact ctaaaggaga
    3151  agtggaaaga tacaaagcaa gattggttgc aaaaggttat agtcaaagag
    3201  ccggaattga ctatgacgag atatttgctc ccgttgctcg tctagaaacg
    3251  gttagactaa tcatctcact agcggctcaa aacaagtgga agatacatca
    3301  aatggatgtc aagtcggcct tcttaaatgg agatcttgaa gaagaagttt
    3351  acattgagca accacaaggc tacatagtca aaggtgaaga agacaaagtc
    3401  ttgaggctaa aaaaggtgct ttatggatta aaacaagccc caagagcttg
    3451  gaatactcga attgacaagt atttcaagga gaaagatttc atcaagtgtc
    3501  catatgagca tgcactctat atcaaaattc aaaaagaaga tatattgatc
    3551  gcatgcttat atgtagatga tttgatattc acgggtaaca atccaagcat
    3601  gttcgaagaa ttcaagaaag agatgacgaa ggagttcgag atgacggaca
    3651  ttggattgat gtcttactat ctcggaattg aagtaaaaca agaagacaat
    3701  ggaatattca taactcaaga aggctatgct aaggaggtac ttaagaagtt
    3751  caagatggat gactcaaatc ccgtttgtac accaatggaa tgcggaatca
    3801  aactatcaaa gaaagaagaa ggggaaggag tggatccaac taacctttaa
    3851  gagcttggtt ggaagcttga gatacttaac atgcacaagg cccgatattt
    3901  tatatgcggt cggagttgtt agtcgttaca tggagcatcc aacaacaact
    3951  catttcaaag cggcaaaaag gattcttcgc tatatcaaag gtaccgtaaa
    4001  ctttggctta cattattcaa ctactagtga ttacaagctt gttgtatgcc
    4051  atgctatttg gttaagaaac ctcttgaaag agttaagctt accacaagag
    4101  gaaccaacga agatctttgt ggacaacaag tcggcaatag ctttggcgaa
    4151  gaacccggtc ttccatgatc gaagtaaaca cattgacaca cgctatcact
    4201  acattagaga gtgtgttagc aagaaggacg tgcaattaga gtatgtgaag
    4251  acacatgatc aagtagccga tatttttacc aagcctctca agcgtgaaga
    4301  ctttatcaag atgaggagtt tgcttggagt agcaaaatca agtttaagag
    4351  ggggtgttga aagttaaact tgattttgaa tcaagtttaa ttattggatc
    4401  aattatccaa taattaatta tggccaaatc caagttctag agttttctct
    4451  agaaatatca tcatttccac ctccttaaag gattctagaa attttctaga
    4501  atcatcttcc acctccttaa acataaaaat ctagatactc taatagaata
    4551  atctagataa tttgaataat gtaatctaga tcttatgtaa gaactctcta
    4601  gacttaggat taaaatattt tagatatttt gtagtttgga ggctataaat
    4651  acctcctccc cctctcaaat gttgtaatgt tgtgaagttg tattcaagtt
    4701  taaagcaaag taataaaagt tctatttcct aaaaaactct ctcaaaacac
    4751  ttaaacactt tctccattac ctctaaaaga attttactct aac