Sequence of DPV East African cassava mosaic virus
East African cassava mosaic virus-Uganda2(Uganda variant) segment A, complete sequence
ACC No: Z83257
Dated: 2003-04-10 | Length: 2799 | CRC: -1996223966
!!NA_SEQUENCE 1.0
ID CVUV39 standard; circular DNA; VRL; 2799 BP.
XX
AC Z83257;
XX
SV Z83257.1
XX
DT 30-JUN-1997 (Rel. 52, Created)
DT 10-APR-2003 (Rel. 75, Last updated, Version 12)
XX
DE East African cassava mosaic virus-Uganda2(Uganda variant) segment A,
DE complete sequence
XX
KW coat protein.
XX
OS East African cassava mosaic virus-Uganda2(Uganda variant)
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC East African cassava mosaic virus.
XX
RN [2]
RP 1-2799
RA Robinson D.;
RT ;
RL Submitted (09-DEC-1996) to the EMBL/GenBank/DDBJ databases.
RL Robinson D., Scottish Crop Research Institute, Invergowrie, Dundee, UK.
XX
RN [3]
RP 1-2799
RX MEDLINE; 97410299.
RX PUBMED; 9267014.
RA Zhou X.P., Liu Y.L., Calvert L., Munoz C., Otim-Nape G.W., Robinson D.J.,
RA Harrison B.D.;
RT "Evidence that DNA-A of a geminivirus associated with severe cassava mosaic
RT disease in Uganda has arisen by interspecific recombination";
RL J. Gen. Virol. 78:2101-2111(1997).
XX
DR GOA; O09349; O09349.
DR SPTREMBL; O09349; O09349.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2799
FT /db_xref="taxon:223269"
FT /note="natural recombinant between African cassava mosaic
FT virus and East African cassava mosaic virus"
FT /virion
FT /organism="East African cassava mosaic virus-Uganda2(Uganda
FT variant)"
FT /isolate="Uganda"
FT /segment="A"
FT CDS 332. .1105
FT /db_xref="GOA:O09349"
FT /db_xref="SPTREMBL:O09349"
FT /product="coat protein"
FT /protein_id="CAB05850.1"
FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA
FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTHR
FT VGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNAPQDFGQIFNMFDNE
FT PSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYKLNHHVTYNHQEAGKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN"
XX
SQ Sequence 2799 BP; 731 A; 551 C; 728 G; 789 T; 0 other;
Z83257 Length: 2799 April 15, 2003 08:31 Type: N Check: 4784 ..
1 accggatggc cgcgcccgaa aaagcaggtg gaccccacaa tgaccgcgcc
51 cgtgaaagaa agtggtccct gcgcacttgt tttggtcggc cagtcatatt
101 cacgcgtgaa agtctagata tttgttgttt gtctttatag acttcgtcgc
151 gaagtagtag agcgcgtcaa catgtgggat ccattggtga acgattttcc
201 cgaaaccgtt cacggtttcc gttctatgct tgctgttaaa tacctgttac
251 atctggaaca ggaatacgat cgcggtactg tcggggctga gtatatacgg
301 gatctaatag gggttctacg gtgtaagaat tatgtcgaag cgaccaggag
351 atataataat ctcaacaccc gtatccaagg tgcggaggag gctgaacttc
401 gacagcccat acacgaaccg tgttgttgcc cccactgtcc gcgtcaccag
451 aagcaaaata tgggccaaca ggcccatgta tcggaaaccc aagatgtaca
501 gaatgtatcg aagcccagat gtccctaagg gctgtgaagg cccatgtaag
551 gtccagtcgt ttgagcagag ggatgatgtg aagcaccttg gtatctgtaa
601 ggtgattagt gatgtgacgc gtgggcctgg gctgacacac agggtcggaa
651 agaggttttg tatcaagtcc atttacattc ttggtaagat ctggatggat
701 gaaaatatta agaagcagaa tcacactaat aatgtgatgt tttacctgct
751 tagggataga aggccgtatg gcaatgcgcc ccaagacttt gggcagatat
801 ttaacatgtt tgataatgag cccagtactg caacaattaa gaacgatttg
851 agggataggt ttcaggtgtt gaggaaattt catgccactg ttgttggtgg
901 tccatctggc atgaaggagc aggcgttggt gaaaaggttt tacaagctga
951 atcatcacgt gacatataat catcaggagg cagggaagta tgagaatcac
1001 acagagaatg cgttgttatt gtatatggca tgtacacatg cctcgaatcc
1051 tgtgtatgct acgctgaaaa tacgcatcta tttttatgat gcagtgacaa
1101 attaataaag gttgaatttt attgcatgtt gctccgtaac ttgtagtgtg
1151 tgtagtaata catcgtacac aacatgatca acagcttgaa ggacagtgtt
1201 aatggaaata acgcctatca tatctaaata cttgagcact tgatatctaa
1251 atactcttaa gaaacgacca gtctgaggcc gtaaggtcgt ccagatcttg
1301 aagttgagaa aacacttgtg aatccccaat gccttccgaa ggttgtggtt
1351 gaaccgtatc tggagtgtga tgatgtcgtg gttcatgttc cctggcctct
1401 tgtcgtggtc ggtgatttcg aaatagaggg gatttgttat gtcccaggta
1451 aaaacgccat tccttgcttg aggcgcagtg atgagttccc ctgtgcgaga
1501 atccatggtt gatgcagtcg atatggagat agaacgagca gccgcattcg
1551 aggtctaccc gcctacgtct gacggccctg gtcttcgctg tgcggtgttg
1601 gactttgatg ggcactagag aacaatggct cgtggagggt gatgaaggtg
1651 gcattcttta aagcccaggc tttaagggat tggttctttt cctcgtccag
1701 aaactcttta tatgatgatg ttggtcctgg attgcagagg aagatagtgg
1751 gaatgccgcc tttaatttga attggcttcc cgtattttgt attgctttgc
1801 cagtctcttt gggcccccat gaattccttg aagtgtttga ggtagtgggg
1851 gtcgacgtca tcaatgacgt tgtaccatgc gtcgtttgaa tataccttgg
1901 gagacagatc caggtgtcca caaagataat tatggggtcc cagtgaacga
1951 gcccacattg ttttgccggt tcggctatca ccttctagaa caatactgat
2001 cggtctccat ggccgcgcag cgggactgca tatattttcg gatacccata
2051 cctctatgtc ttctggaact tgtgtaaaag atgatgataa gaacggacta
2101 acgtaagttt gtggcggagc ctggaagatt ctatctgcgt tagcagatat
2151 gttatggaac tgtaaaaaaa aggactttgg atctttttct ttaataattt
2201 gaagagcctc ggatttagac gaagcattca acgcgtctgc atatacctga
2251 gctaaatgct ggccctcccc tcttgcactt ctggcatcga cttggaaaag
2301 tccagcgtca agaaattccc ctcccttttc aatgtaagct ttgacatcgg
2351 acgatgattt agctccctga atgttcggat ggaaatgtgt tgatcgggat
2401 ggggaaatga gatcgaagaa tctcgggttg gtacattgga acttgccttc
2451 gaattggatg agaacatgga gatgaggcac cccatcctga tgtagttctc
2501 tgcaaaccct aatgaatttg atattcgtcg ggtacgaaag ggcttgtaat
2551 tgggaaaggg cctcttcttt tgttaatgag catcggggat aggtgacgaa
2601 ataatttttg gcatttattt gaaaacgacc ggctcttggc atattggctg
2651 tcgttttgaa tcgggggaca ctcaaagtct gtagcaatcg gtggaatggg
2701 gggcaattta tatgatgtcc cccaatggca tatgtgtaaa taggtagact
2751 tccattcaaa atttgaattc cgaatattgg cggccatccg attaatatt