Curated Sequences of ss satellite RNAs

Family: ss satellite RNAs

Genera in the Family

Unassigned Viruses in the Family

Tobacco ringspot virus satellite RNA
  • M14879 Complete sequence
  • M17439 Complete sequence, second isolate
Cherry small circular viroid-like RNA
  • DQ357615 Complete sequence, Italian type 1 isolate cscRNA1.84
  • DQ357616 Complete sequence, Italian type 1 isolate cscRNA1.83
  • DQ357617 Complete sequence, Italian type 1 isolate cscRNA1.71
  • DQ357618 Complete sequence, Italian type 1 isolate cscRNA1.78
  • DQ357619 Complete sequence, Italian type 1 isolate cscRNA1.72
  • DQ357620 Complete sequence, Italian type 1 isolate cscRNA1.7O
  • DQ357621 Complete sequence, Italian type 2 isolate cscRNA2.81
  • DQ357622 Complete sequence, Italian type 2 isolate cscRNA2.82
  • DQ357623 Complete sequence, Italian type 2 isolate cscRNA2.139
  • DQ357624 Complete sequence, Italian type 1 isolate cscRNA1.103
  • DQ357625 Complete sequence, Italian type 1 isolate cscRNA1.114
  • DQ357626 Complete sequence, Italian type 1 isolate cscRNA1.113
  • DQ357627 Complete sequence, Italian type 1 isolate cscRNA1.100
  • DQ357628 Complete sequence, Italian type 1 isolate cscRNA1.150
  • Y12833 Complete sequence, Di Serio et al., 1997
Rice yellow mottle virus satellite RNA
Arabis mosaic virus small satellite RNA
  • GQ369531 Complete sequence, Swiss barley isolate ba
  • M21212 Complete sequence
Chicory yellow mottle virus satellite RNA
  • D00685 Complete sequence, isolate T
  • D00721 Complete sequence, isolate S1
Mulberry small circular viroid-like RNA 1
  • JQ809700 Complete sequence, Chinese isolate 201110151
Velvet tobacco mottle virus satellite RNA
  • HQ680397 Complete sequence, Australian isolate K1v
  • HQ680398 Complete sequence, Australian isolate R17v
  • J02439 Complete sequence
Cereal yellow dwarf virus-RPV satellite RNA
Lucerne transient streak virus satellite RNA
  • D00341 Complete sequence, strain C
  • X01984 Complete sequence, strain A
  • X01985 Complete sequence, strain N
Solanum nodiflorum mottle virus satellite RNA
Subterranean clover mottle virus satellite RNA
  • M33000 Complete sequence (388 nt)
  • M33001 Complete sequence (332 nt)
Grapevine virus satellite RNA
  • KC149510 Complete sequence, US isolate AUD46129
Bamboo mosaic virus satellite RNA
  • AY205159 Complete sequence, isolate DLI-1
  • AY205160 Complete sequence, isolate DLI-2
  • AY205161 Complete sequence, isolate DLI-3
  • AY205162 Complete sequence, isolate DLI-4
  • AY205163 Complete sequence, isolate DLI-5
  • AY205164 Complete sequence, isolate DLI-6
  • AY205165 Complete sequence, isolate DLI-7
  • AY205166 Complete sequence, isolate DLI-8
  • AY205167 Complete sequence, isolate DLI-9
  • AY205168 Complete sequence, isolate DLI-10
  • AY205169 Complete sequence, isolate DLII-1
  • AY205170 Complete sequence, isolate DLII-2
  • AY205172 Complete sequence, isolate DLII-4
  • AY205173 Complete sequence, isolate DLII-5
  • AY205174 Complete sequence, isolate DLII-6
  • AY205175 Complete sequence, isolate DLII-7
  • AY205176 Complete sequence, isolate DLII-8
  • AY205177 Complete sequence, isolate DLII-9
  • AY205178 Complete sequence, isolate DLIII-1
  • AY205179 Complete sequence, isolate DLIII-2
  • AY205180 Complete sequence, isolate DLIII-3
  • AY205181 Complete sequence, isolate DLIII-4
  • AY205182 Complete sequence, isolate DLIII-5
  • AY205183 Complete sequence, isolate DLIII-6
  • AY205184 Complete sequence, isolate DLIII-7
  • AY205185 Complete sequence, isolate DLIII-8
  • AY205186 Complete sequence, isolate DLIII-9
  • AY205187 Complete sequence, isolate DLIV-1
  • AY205188 Complete sequence, isolate DLIV-2
  • AY205189 Complete sequence, isolate DLIV-3
  • AY205190 Complete sequence, isolate DLIV-4
  • AY205191 Complete sequence, isolate DLIV-5
  • AY205192 Complete sequence, isolate DLIV-6
  • AY205193 Complete sequence, isolate DLIV-7
  • AY205194 Complete sequence, isolate DLIV-8
  • AY205195 Complete sequence, isolate DLIV-9
  • AY205196 Complete sequence, isolate DLIV-10
  • AY205197 Complete sequence, isolate DLIV-11
  • AY205198 Complete sequence, isolate DLIV-12
  • AY205199 Complete sequence, isolate BB21
  • AY205200 Complete sequence, isolate DL6V-1
  • AY205201 Complete sequence, isolate DL6V-3
  • AY205202 Complete sequence, isolate DL6V-8
  • AY205203 Complete sequence, isolate DL6V-10
  • AY205204 Complete sequence, isolate DL6V-12
  • AY205205 Complete sequence, isolate DL6V-4
  • AY205206 Complete sequence, isolate DL6V-6
  • AY205207 Complete sequence, isolate DL6V-7
  • AY205208 Complete sequence, isolate DL6V-9
  • AY205209 Complete sequence, isolate BSL3
  • AY205210 Complete sequence, isolate BSL6
  • AY205211 Complete sequence, isolate DL11
  • AY205212 Complete sequence, isolate DL12
  • AY205213 Complete sequence, isolate DL15
  • AY205214 Complete sequence, isolate DL16
  • AY205215 Complete sequence, isolate DL23
  • AY205216 Complete sequence, isolate BB18
  • AY205217 Complete sequence, isolate BB23
  • AY205218 Complete sequence, isolate BB25
  • AY205219 Complete sequence, isolate BB28
  • AY205220 Complete sequence, isolate BO20
  • AY205221 Complete sequence, isolate BO23
  • AY205222 Complete sequence, isolate BV17
  • AY205223 Complete sequence, isolate DL17
  • AY205224 Complete sequence, isolate DL19
  • AY205225 Complete sequence, isolate DL20
  • AY205226 Complete sequence, isolate DL21
  • AY205227 Complete sequence, isolate BSF4
  • AY205228 Complete sequence, isolate BSL4
  • AY205229 Complete sequence, isolate USA1
  • AY205230 Complete sequence, isolate BSL2
  • AY205231 Complete sequence, isolate BSL1
  • L22762 Complete sequence
Beet ringspot virus satellite RNA

None reported

Grapevine fanleaf virus satellite RNA
  • D00442 Complete sequence
  • KC161999 Complete sequence, US isolate R6
  • KC162000 Complete sequence, US isolate R2
Tomato black ring virus satellite RNA
  • X00978 Complete sequence, S isolate
  • X05687 Complete sequence, L isolate
  • X05688 Complete sequence, E isolate
  • X05689 Complete sequence, C isolate
Arabis mosaic virus large satellite RNA
  • D00664 Complete sequence, lilac isolate
  • DQ187315 Complete sequence, hop isolate
  • DQ187316 Complete sequence, isolate J86
  • DQ187317 Complete sequence, isolate NW
  • DQ187318 Complete sequence, isolate P116
  • DQ187319 Complete sequence, isolate P119
Blackcurrant reversion virus satellite RNA
Myrobalan latent ringspot virus satellite RNA

None reported

Grapevine Bulgarian latent virus satellite RNA

None reported

Strawberry latent ringspot virus satellite RNA
  • AY860980 Complete sequence, isolate NCGR MEN 454.001
  • X69826 Complete sequence, strain T 39 isolate H
Chicory yellow mottle virus large satellite RNA
  • D00686 Complete sequence, isolate C
  • D00722 Complete sequence, isolate L1
Peanut stunt virus satellite RNA
  • EF469733 Complete sequence, Polish celery isolate Ag
  • EF535259 Complete sequence, Polish Lupinus strain P
  • K03110 Peanut stunt virus-associated RNA5 (PARNA 5)
  • Z98197 Complete sequence, P-6 isolate
  • Z98198 Complete sequence, P-4 isolate
Panicum mosaic virus satellite RNA

None reported

Turnip crinkle virus satellite RNA
  • X12749 Complete sequence, avirulent satellite RNA F
  • X12750 Complete sequence, virulent satellite RNA C
Cucumber mosaic virus satellite RNA
  • AB024493 Complete sequence, unnamed isolate
  • AB072502 Complete sequence, clone:55-1
  • AB072503 Complete sequence, clone:28-19
  • AB072504 Complete sequence, clone:(fl)RNA5
  • AB176850 Complete sequence, Japanese tomato isolate TN
  • AB448699 Complete sequence, Syrian isolate PoSA1
  • AB448700 Complete sequence, Syrian isolate PoSA2
  • AB448701 Complete sequence, Syrian isolate PoSA3
  • AB448702 Complete sequence, Syrian isolate PoSA4
  • AB448703 Complete sequence, Syrian isolate PoSA5
  • AB570294 Complete sequence, strain PepY
  • AB570295 Complete sequence, strain Paf
  • AF172648 Complete sequence, isolate CA8
  • AF451896 Complete sequence, isolate Rs
  • AF451897 Complete sequence, isolate YNs
  • AJ236904 Complete sequence, isolate 1998 China-1
  • AJ236905 Complete sequence, isolate 1998 China-5
  • AJ457163 Complete sequence, isolate P1-1
  • AJ457164 Complete sequence, isolate P1-2
  • AY589728 Complete sequence, Chinese isolate CS2
  • AY589729 Complete sequence, Chinese isolate CS1
  • AY625252 Complete sequence, Mexican Leonotis nepetaefolia isolate
  • D00541 Complete sequence, isolate Ra
  • D00542 Complete sequence, isolate Y
  • D00699 Complete sequence, unnamed isolate
  • D10036 Complete sequence, isolate S19
  • D10037 Complete sequence, isolate T73
  • D10038 Complete sequence, isolate Y clone pUT119GG-S
  • D10039 Complete sequence, isolate T43
  • D11048 Complete sequence, clone pKO2sat1
  • D11049 Complete sequence, clone pKO2sat2
  • D11050 Complete sequence, clone pKO2sat3
  • D11051 Complete sequence, clone pKO2sat4
  • D11052 Complete sequence, clone pKO2sat5
  • D11053 Complete sequence, clone pKO2sat6
  • D28559 Complete sequence, isolate KN
  • D42081 Complete sequence, isolate C7-2
  • D42082 Complete sequence, isolate CS
  • D84389 Complete sequence, strain TN
  • D89673 Complete sequence, isolate SD
  • DD290166 Complete sequence, isolate NDM-4
  • DD290167 Complete sequence, isolate NDM-5
  • DD290168 Complete sequence, isolate NDM-3
  • DD290169 Complete sequence, isolate NDM-1
  • DD436468 Complete sequence, isolate NDM05-1
  • DD436469 Complete sequence, isolate NDM05-2
  • DD436470 Complete sequence, isolate KO1
  • DD436471 Complete sequence, isolate KO2
  • DD436472 Complete sequence, isolate KO3
  • DD436473 Complete sequence, isolate KO4
  • DD436474 Complete sequence, isolate KO5
  • DD436475 Complete sequence, isolate NDM-3
  • DD436476 Complete sequence, isolate NDM-4
  • DD436477 Complete sequence, isolate NDM-5
  • DJ022898 Complete sequence, isolate NDM05-3
  • DJ022899 Complete sequence, isolate K01
  • DJ022900 Complete sequence, isolate K02
  • DJ022901 Complete sequence, isolate K03
  • DJ022902 Complete sequence, isolate K04
  • DJ022903 Complete sequence, isolate K05
  • DJ022904 Complete sequence, isolate NDM-3
  • DJ022905 Complete sequence, isolate NDM-4
  • DJ022906 Complete sequence, isolate NDM-5
  • DJ022907 Complete sequence, isolate NDM05-1
  • DJ022908 Complete sequence, isolate NDM05-2
  • DM466220 Complete sequence, attenuated strain NDM08-1
  • DM466221 Complete sequence, attenuated strain NDM05-2
  • DQ070747 Complete sequence, Chinese sugar beet isolate XJs2
  • DQ070748 Complete sequence, Chinese sugar beet isolate XJs1
  • DQ249297 Complete sequence, Chinese tomato isolate TSH
  • DQ412733 Complete sequence, Chinese isolate Yi
  • DQ785472 Complete sequence, Chinese tomato isolate T1
  • DQ839133 Complete sequence, Croatian isolate
  • DQ975201 Complete sequence, isolate Ky
  • E02257 Complete sequence, strain Y, patent JP 1990053491-A/1 isolate
  • E04016 Complete sequence t73, patent JP 1992330234-A/1 isolate
  • E04223 Complete sequence patent JP 1993003789-A/4 isolate
  • E04224 Complete sequence patent JP 1993003789-A/5 isolate
  • E04225 Complete sequence patent JP 1993003789-A/6 isolate
  • EF363687 Complete sequence, Chinese tomato isolate Yn12
  • EF363688 Complete sequence, Chinese pepper isolate Pz
  • EU022373 Complete sequence, Chinese isolate 2m
  • EU365893 Complete sequence, Egyptian isolate (582nt)
  • FW342680 Complete sequence from strain NDM08-2
  • FW342681 Complete sequence from strain KO1
  • FW342682 Complete sequence from strain KO2
  • FW342683 Complete sequence from strain KO3
  • FW342684 Complete sequence from strain KO4
  • FW342685 Complete sequence from strain KO5
  • FW342686 Complete sequence from strain NDM-3
  • FW342687 Complete sequence from strain NDM05-1
  • FW342688 Complete sequence from strain NDM05-2
  • FW342689 Complete sequence from strain NDM05-3
  • FW342690 Complete sequence from strain NDM08-1
  • HQ283394 Complete sequence, Chinese tomato isolate SFQT1-2
  • HQ283395 Complete sequence, Chinese tomato isolate FFQT1-3
  • HV194209 Complete sequence from patent JP19999267179-A/1
  • J02060 Complete sequence, unnamed isolate
  • J02061 Complete sequence, isolate (1)caRNA5
  • JF834526 Complete sequence, US snap bean isolate IR-WI
  • JF918968 Complete sequence, isolate 0100-satRNA-339
  • JF918969 Complete sequence, isolate 0100-satRNA-340
  • JF918970 Complete sequence, isolate 0100-satRNA-389
  • JF918971 Complete sequence, isolate N1-02-satRNA-339small
  • JF918972 Complete sequence, isolate N1-02-satRNA-389large
  • JF918973 Complete sequence, isolate N1-03-satRNA
  • JF918974 Complete sequence, isolate N1-04-satRNA
  • JF918975 Complete sequence, isolate N1-05-satRNA
  • JN029953 Complete sequence, US snap bean isolate IR-NY
  • KC415034 Complete sequence, US isolate Sb-WI
  • KC713593 Complete sequence, Cote D'Ivoire isolate sBM26
  • M10686 Complete sequence, isolate CARNA 5
  • M14934 Complete sequence, isolate (S)CARNA 5
  • M16585 Complete sequence, isolate G.
  • M16586 Complete sequence, isolate B1.
  • M16587 Complete sequence, isolate B2.
  • M16588 Complete sequence, isolate B3.
  • M16589 Complete sequence, isolate WL1.
  • M16590 Complete sequence, isolate WL2.
  • M18867 Complete sequence, isolate I17N(1)
  • M18868 Complete sequence, isolate I17N(2)
  • M18869 Complete sequence, isolate R(1)
  • M18870 Complete sequence, isolate R(2)
  • M18871 Complete sequence, isolate R(3)
  • M18872 Complete sequence, isolate D
  • M20350 Complete sequence, isolate CARNA 5, clone D
  • M20352 Complete sequence, isolate CARNA 5, clone Sq10
  • M20353 Complete sequence, isolate CARNA 5, clone Ch20
  • M20354 Complete sequence, isolate CARNA 5, clone X2nT3
  • M20355 Complete sequence, isolate CARNA 5, clone X7
  • M20356 Complete sequence, isolate CARNA 5, clone X12
  • M20357 Complete sequence, isolate CARNA 5, clone X15
  • M20360 Complete sequence, isolate CARNA 5, clone X2c
  • M20844 Complete sequence, isolate E
  • M20845 Complete sequence, isolate OY2
  • M30584 Complete sequence, isolate D, clone pDsat4
  • M30585 Complete sequence, isolate D, clone pDsat5
  • M30586 Complete sequence, isolate D, clone pDsat6
  • M30587 Complete sequence, isolate D, clone pDsat9
  • M30588 Complete sequence, isolate WL, clone pWLsat47
  • M30589 Complete sequence, isolate WL, clone pWLsat210
  • M30590 Complete sequence, isolate WL, clone pWLsat324
  • M30591 Complete sequence, isolate B-1, clones pBsat[1,3,5]
  • M30592 Complete sequence, isolate B-1, clone pBsat2
  • M30593 Complete sequence, isolate B-1, clone pBsat4
  • M64284 Complete sequence, isolate Ix
  • U31660 Complete sequence, isolate J876-CARNA-5
  • U31661 Complete sequence, isolate D27-CARNA-5
  • U43093 Complete sequence, isolate RNA 5.2
  • U43094 Complete sequence, isolate RNA 5.2
  • U43095 Complete sequence, isolate RNA 5.3
  • U43889 Complete sequence, isolate banana
  • X51465 Complete sequence, isolate WL3
  • X53534 Complete sequence, isolate K8
  • X54065 Complete sequence, isolate Fny1
  • X54066 Complete sequence, isolate Fny2
  • X57582 Complete sequence, isolate M
  • X65455 Complete sequence, isolate TFN
  • X69136 Complete sequence, unnamed isolate
  • X86408 Complete sequence, isolate T8A
  • X86409 Complete sequence, isolate T1
  • X86410 Complete sequence, isolate T2
  • X86411 Complete sequence, isolate T7
  • X86412 Complete sequence, isolate T22
  • X86413 Complete sequence, isolate T16
  • X86414 Complete sequence, isolate T6
  • X86415 Complete sequence, isolate T4
  • X86416 Complete sequence, isolate T12
  • X86417 Complete sequence, isolate To79
  • X86418 Complete sequence, isolate T57
  • X86419 Complete sequence, isolate T27
  • X86420 Complete sequence, isolate T8
  • X86421 Complete sequence, isolate TO80
  • X86422 Complete sequence, isolate TO77
  • X86423 Complete sequence, isolate T59
  • X86424 Complete sequence, isolate NG71
  • X86425 Complete sequence, isolate CE
  • X86426 Complete sequence, isolate PG
  • X86708 Complete sequence, isolate T18
  • X89003 Complete sequence, isolate F2
  • X89004 Complete sequence, isolate FG
  • Z75870 Complete sequence, isolate To/1989/16.1
  • Z75871 Complete sequence, isolate To/1991/4.1
  • Z75872 Complete sequence, isolate To/1989/19.1
  • Z75873 Complete sequence, isolate To/1989/20.2
  • Z75874 Complete sequence, isolate To/1989/24.1
  • Z75875 Complete sequence, isolate To/1989/12.1
  • Z75876 Complete sequence, isolate To/1989/20.1
  • Z75877 Complete sequence, isolate To/1990/16.1
  • Z75878 Complete sequence, isolate To/1990/15.1
  • Z75879 Complete sequence, isolate To/1990/20.1
  • Z75880 Complete sequence, isolate To/1990/21.1
  • Z75881 Complete sequence, isolate To/1990/19.1
  • Z75882 Complete sequence, isolate To/1991/2.2
  • Z75883 Complete sequence, isolate To/1990/5.1
  • Z75884 Complete sequence, isolate To/1991/3.1
  • Z75885 Complete sequence, isolate To/1989/3.4
  • Z75886 Complete sequence, isolate To/1991/8.1
  • Z96099 Complete sequence, isolate China, P1
Beet black scorch virus satellite RNA
  • AY394497 Complete sequence (615 nt)
  • FJ176575 Complete sequence (616 nt)
  • FN543472 Complete sequence, Iranian isolate Ir-Ha1sat
  • FN543473 Complete sequence, Iranian isolate Ir-Msh1sat
  • FN543474 Complete sequence, Iranian isolate Ir-Kh1sat
  • FN543475 Complete sequence, Iranian isolate Ir-Bj1sat
  • JN635326 Complete sequence, Xinjiang isolate
Groundnut rosette virus satellite RNA
  • AF202866 Complete sequence, clone M11S
  • AF202867 Complete sequence, clone M12S
  • AF202868 Complete sequence, clone M16S
  • AF202869 Complete sequence, clone M24S
  • AF202870 Complete sequence, clone N310S
  • Z29702 Complete sequence, Malawi chlorotic, MC3A isolate
  • Z29703 Complete sequence, Malawi chlorotic, MC3B isolate
  • Z29704 Complete sequence, Nigerian green, NG3A isolate
  • Z29705 Complete sequence, Nigerian green, NG3B isolate
  • Z29706 Complete sequence, Nigerian mild, NM3A isolate
  • Z29707 Complete sequence, Nigerian mild, NM3B isolate
  • Z29708 Complete sequence, Nigerian mild, NM3C isolate
  • Z29709 Complete sequence, Nigerian mild, NM3D isolate
  • Z29710 Complete sequence, Yellow blotch, YB3A isolate
  • Z29711 Complete sequence, Yellow blotch, YB3B isolate
Tobacco bushy top virus satellite RNA
  • AF510392 Complete sequence, Chinese Baoshan isolate
  • AJ315135 Complete sequence, Chinese Baoshan isolate SalR-YN1
  • AJ315136 Complete sequence, Chinese Baoshan isolate SalR-YN2
  • AM235742 Complete sequence, Yunnan isolate YN3
  • AM238656 Complete sequence, Yunnan Dali isolate YN4
  • AM238657 Complete sequence, Yunnan Yuxi isolate YN5
  • FN821689 Complete sequence, strain Dali isolate Mdu YN6
  • FN821690 Complete sequence, strain Dali isolate WSh YN7
  • FN821691 Complete sequence, strain Kunming isolate Yji YN8
Cymbidium ringspot virus satellite RNA
Pea enation mosaic virus satellite RNA
  • U03564 Complete sequence, WSG satellite
Tomato bushy stunt virus satellite RNA
  • AF022787 Complete sequence, B1 satellite RNA
  • AF022788 Complete sequence, B10 satellite RNA
Carrot mottle mimic virus satellite RNA
  • EU914919 Complete sequence, Greek Thessaloniki isolate
  • EU914920 Complete sequence, German Quedlinburg isolate
Tomato bushy stunt virus satellite RNA L
  • FJ666076 Complete sequence, Italian isolate
Pelargonium leaf curl virus satellite RNA

None reported

Tobacco necrosis virus small satellite RNA

None reported

Petunia asteroid mosaic virus satellite RNA

None reported

Artichoke mottled crinkle virus satellite RNA

None reported

Carnation Italian ringspot virus satellite RNA

None reported