Plant Virus and Viroid Sequences


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NADRV (NADRV) - Rotavirus

  • DQ113897 Adult diarrheal rotavirus strain J19 VP1 gene, complete cds.
  • DQ113898 Adult diarrheal rotavirus strain J19 VP2 gene, complete cds.
  • DQ113899 Adult diarrheal rotavirus strain J19 VP4 gene, complete cds.
  • DQ113900 Adult diarrheal rotavirus strain J19 VP3 gene, complete cds.
  • DQ113901 Adult diarrheal rotavirus strain J19 NSP1 gene, complete cds.
  • DQ113902 Adult diarrheal rotavirus strain J19 VP6 gene, complete cds.
  • DQ113903 Adult diarrheal rotavirus strain J19 NSP2 gene, complete cds.
  • DQ113904 Adult diarrheal rotavirus strain J19 NSP3 gene, complete cds.
  • DQ113905 Adult diarrheal rotavirus strain J19 VP7 gene, complete cds.
  • DQ113906 Adult diarrheal rotavirus strain J19 NSP4 gene, complete cds.
  • DQ113907 Adult diarrheal rotavirus strain J19 NSP5 gene, complete cds.

Naples virus () - Phlebovirus

  • JF939843 Naples virus strain Sabin polymerase gene, complete cds.
  • JF939844 Naples virus strain Sabin polyprotein gene, complete cds.
  • JF939845 Naples virus strain Sabin nucleoprotein and non-structural protein genes, complete cds.

Narcissus common latent virus (NCLV) - Carlavirus

  • AJ311375 Narcissus carlavirus genomic RNA for TGB2, TGB3, coat protein and Nucleic acid binding protein, isolate Chongming Island
  • AJ311376 Narcissus carlavirus partial genomic RNA for TGB2, TGB3, coat protein and Nucleic acid binding protein, isolate Zhangzhou
  • AM158439 Narcissus common latent virus complete genome, genomic RNA, isolate Zhangzhou
  • EU200454 Narcissus common latent virus isolate NV-2 triple gene block protein 2, triple gene block protein 3, coat protein, and nucleic acid binding protein genes, complete cds.

Narcissus degeneration virus (NDV) - Potyvirus

  • AF511486 Lycoris potyvirus polyprotein precursor, gene, partial cds.
  • AJ311373 Chinese narcissus potyvirus partial genomic RNA for viral polyprotein (ORF1), isolate Zhangzhou
  • AJ311374 Chinese narcissus potyvirus partial genomic RNA for viral polyprotein, (ORF1), isolate Chongming Island
  • AM182028 Narcissus degeneration virus complete genome, isolate Zhangzhou
  • DQ991145 Indian Narcissus potyvirus isolate Lucknow polyprotein gene, partial cds.
  • EU200456 Narcissus degeneration virus isolate NV-3 polyprotein gene, partial cds.
  • JQ395041 Narcissus degeneration virus isolate Marijiniup 2, complete genome.

Narcissus late season yellows virus (NLSYV) - Potyvirus

  • AJ493579 Narcissus late season yellow virus partial gene for polyprotein, genomic RNA
  • EU887015 Narcissus late season yellows virus polyprotein gene, partial cds.
  • GU905149 Narcissus late season yellows virus isolate WA-1 coat protein gene, partial cds.
  • GU905150 Narcissus late season yellows virus isolate WA-2 polyprotein gene, partial cds.
  • GU905151 Narcissus late season yellows virus isolate WA-3 coat protein gene, partial cds.
  • GU905152 Narcissus late season yellows virus isolate WA-4 coat protein gene, partial cds.
  • GU905153 Narcissus late season yellows virus isolate WA-5 polyprotein gene, partial cds.
  • GU905154 Narcissus late season yellows virus isolate WA-6 polyprotein gene, partial cds.
  • GU905155 Narcissus late season yellows virus isolate WA-7 polyprotein gene, partial cds.
  • GU905156 Narcissus late season yellows virus isolate WA-8 polyprotein gene, partial cds.
  • GU905157 Narcissus late season yellows virus isolate WA-9 polyprotein gene, partial cds.
  • JQ326210 Narcissus late season yellows virus isolate Zhangzhou, complete genome.

Narcissus latent virus (NLV) - Macluravirus

  • DQ450199 Narcissus latent virus polyprotein gene, partial cds.
  • FJ024083 Narcissus latent virus polyprotein gene, partial cds.
  • JN662380 Narcissus latent virus isolate NL1_1 polyprotein gene, partial cds.
  • JN662381 Narcissus latent virus isolate NL1_2 polyprotein gene, partial cds.
  • JN662382 Narcissus latent virus isolate NL1_7 polyprotein gene, partial cds.
  • JN662383 Narcissus latent virus isolate NL1_14 polyprotein gene, partial cds.
  • JN662384 Narcissus latent virus isolate NL1_11 polyprotein gene, partial cds.
  • JN662386 Narcissus latent virus isolate NL1_15 polyprotein gene, partial cds.
  • JN662387 Narcissus latent virus isolate IH11 coat protein gene, partial cds.
  • JN662388 Narcissus latent virus isolate IH17 coat protein gene, partial cds.
  • JX270761 Narcissus latent virus isolate NLV1 polyprotein gene, partial cds.
  • JX270762 Narcissus latent virus isolate NLV3 polyprotein gene, partial cds.
  • JX270763 Narcissus latent virus isolate NLV5_2 polyprotein gene, partial cds.
  • JX270764 Narcissus latent virus isolate NLV5_7 polyprotein gene, partial cds.
  • JX270765 Narcissus latent virus isolate NLV5_9 polyprotein gene, partial cds.
  • JX270766 Narcissus latent virus isolate NLV5_1 polyprotein gene, partial cds.
  • U58770 Narcissus latent virus polyprotein mRNA, partial NIb and complete coat protein regions, partial cds.

Narcissus mosaic virus (NMV) - Potexvirus

  • AY225449 Narcissus mosaic virus strain New Zealand, complete sequence.
  • D13747 Narcissus mosaic virus genomic RNA, complete genome.

Narcissus yellow stripe virus (NYSV) - Potyvirus

  • AJ311372 Narcissus yellow stripe virus partial genomic RNA for viral polyprotein (ORF1), isolate Zhangzhou
  • AM158908 Narcissus yellow stripe virus 1 gene for polyprotein, genomic RNA
  • EU888298 Indian Narcissus potyvirus isolate 2 Lucknow polyprotein gene, partial cds.
  • JQ395042 Narcissus yellow stripe virus isolate Marijiniup 3 polyprotein gene, partial cds.
  • JQ686724 Narcissus yellow stripe virus isolate NAR-1 polyprotein gene, partial cds.

Nariva virus (NarPV) - Unassigned Paramyxoviridae

  • FJ362497 Nariva virus from Trinidad and Tobago, complete genome.

Ndumu virus (NDUV) - Alphavirus

  • HM147989 Ndumu virus, complete genome.

Nemesia ring necrosis virus (NeRNV) - Tymovirus

  • AY751778 Nemesia ring necrosis virus from Nemesia fruticans putative movement protein, polyprotein, and coat protein genes, complete cds.
  • AY751781 Nemesia ring necrosis virus from Diascia sp. coat protein gene, complete cds.
  • EU684141 Diascia yellow mottle virus strain OR, complete genome.
  • EU684142 Nemesia ring necrosis virus strain WA replicase-associated protein RP gene, partial cds; and coat protein CP gene, complete cds.

Nepavirus () - Unassigned Geminiviridae

  • JQ898333 Nepavirus isolate NepaV, complete genome.

Nerine latent virus (NeLV) - Carlavirus

  • AM182569 Narcissus symptomless virus complete genome, isolate Hangzhou-2005
  • HM119495 Nerine latent virus isolate 191191 coat protein gene, partial cds.
  • HM119496 Nerine latent virus isolate 281299 coat protein gene, partial cds.
  • HM119497 Nerine latent virus isolate Ext07 coat protein gene, partial cds.
  • HM119498 Nerine latent virus isolate IVT80054 coat protein gene, partial cds.
  • JQ395043 Nerine latent virus isolate Marijiniup 4, complete genome.
  • JQ395044 Nerine latent virus isolate Marijiniup 5, complete genome.
  • JX524884 Nerine latent virus isolate Nar86 coat protein gene, partial cds.
  • JX524885 Nerine latent virus isolate Nar87 coat protein gene, partial cds.
  • JX848394 Nerine latent virus isolate ALWF36 coat protein gene, partial cds.
  • JX848395 Nerine latent virus isolate ALGC6 coat protein gene, partial cds.
  • JX880023 Nerine latent virus isolate LY56 coat protein gene, partial cds.
  • JX880024 Nerine latent virus isolate ALHL14 coat protein gene, partial cds.
  • JX901048 Nerine latent virus isolate LY7 coat protein gene, partial cds.
  • JX913805 Nerine latent virus isolate LY39 coat protein gene, partial cds.
  • JX978442 Nerine latent virus isolate LY9 coat protein gene, partial cds.
  • KC505177 Nerine latent virus isolate HM4 coat protein gene, partial cds.
  • KC505178 Nerine latent virus isolate HM15 coat protein gene, partial cds.

Nerine virus X (NVX) - Potexvirus

  • AB219105 Nerine virus X genomic RNA, complete genome.
  • HQ166713 Nerine virus X isolate AL-1 replicase protein, triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds.

Nerine yellow stripe virus (NeYSV) - Potyvirus

  • DQ407932 Nerine yellow stripe virus - New Zealand polyprotein gene, partial cds.
  • EF362621 Nerine yellow stripe virus polyprotein gene, partial cds.
  • EF362622 Nerine yellow stripe virus polyprotein gene, partial cds.
  • EU042758 Nerine yellow stripe virus polyprotein gene, partial cds.
  • FJ618537 Nerine yellow stripe virus polyprotein gene, partial cds.
  • JX865782 Nerine yellow stripe virus isolate US polyprotein gene, partial cds.

New Mapoon virus () - Flavivirus

  • KC788512 New Mapoon virus strain CY1014 polyprotein gene, complete cds.

New World begomovirus-associated satellite DNA () - Other begomovirus satellite DNAs

  • JN819486 New World begomovirus associated satellite DNA isolate 177H3, complete genome.
  • JN819487 New World begomovirus associated satellite DNA isolate 177N2, complete genome.
  • JN819488 New World begomovirus associated satellite DNA isolate 177N4, complete genome.
  • JN819489 New World begomovirus associated satellite DNA isolate 177N7, complete genome.
  • JN819490 New World begomovirus associated satellite DNA isolate 228H1, complete genome.
  • JN819491 New World begomovirus associated satellite DNA isolate 228H3, complete genome.
  • JN819492 New World begomovirus associated satellite DNA isolate 228H5, complete genome.
  • JN819493 New World begomovirus associated satellite DNA isolate 228H6, complete genome.
  • JN819494 New World begomovirus associated satellite DNA isolate 228H6B, complete genome.
  • JN819495 New World begomovirus associated satellite DNA isolate 404N1, complete genome.
  • JN819496 New World begomovirus associated satellite DNA isolate 404N2, complete genome.
  • JN819497 New World begomovirus associated satellite DNA isolate 404N3, complete genome.
  • JN819498 New World begomovirus associated satellite DNA isolate 412N1, complete genome.
  • JN819499 New World begomovirus associated satellite DNA isolate 412N3, complete genome.
  • JN819500 New World begomovirus associated satellite DNA isolate 413N2, complete genome.
  • JN819501 New World begomovirus associated satellite DNA isolate 413N3, complete genome.
  • JN819502 New World begomovirus associated satellite DNA isolate 413N5, complete genome.
  • JN819503 New World begomovirus associated satellite DNA isolate 414N1, complete genome.
  • JN819504 New World begomovirus associated satellite DNA isolate 414N2, complete genome.
  • JN819505 New World begomovirus associated satellite DNA isolate 414N3, complete genome.
  • JN819506 New World begomovirus associated satellite DNA isolate 412N2, complete genome.
  • JN819507 New World begomovirus associated satellite DNA isolate 413N1, complete genome.
  • JN819508 New World begomovirus associated satellite DNA isolate 424N1, complete genome.
  • JN819509 New World begomovirus associated satellite DNA isolate 424N2, complete genome.
  • JN819510 New World begomovirus associated satellite DNA isolate 424N3, complete genome.
  • JN986808 New World begomovirus associated satellite DNA isolate H1, complete genome.

Newbury-1 virus () - Nebovirus

  • AY082891 Calicivirus strain NB, complete genome.
  • DQ013304 Newbury agent 1, complete genome.

Newcastle disease virus (NDV) - Avulavirus

  • AF309418 Newcastle disease virus B1, complete genome.

Ngaingan virus (NGAV) - Unassigned Rhabdoviridae

  • FJ715959 Ngaingan virus strain MRM14556, complete genome.

Nicotiana tabacum Tnt1 virus (NtaTnt1V) - Pseudovirus

  • X13777 Tobacco DNA for retroviral-like transposon Tnt 1-94

Nicotiana tabacum Tto1 virus (NtaTto1V) - Pseudovirus

  • D83003 Tobacco DNA, retrotransposon Tto1 sequence encoding an ORF (1338AA), complete cds.

Nicotiana velutina mosaic virus (NVMV) - Unassigned Virgaviridae

  • D00906 Nicotiana velutina mosaic virus gene for capsid protein and membrane proteins, complete cds.

Night-heron coronavirus HKU19 () - Deltacoronavirus

  • JQ065047 Night-heron coronavirus HKU19 strain HKU19-6918, complete genome.

Nilaparvata lugens reovirus (NLRV) - Fijivirus

  • D14691 Nilaparvata lugens reovirus genome segment 10, complete cds.
  • D26127 Nilaparvata lugens reovirus genome segment S8 gene for major outer capsid protein, complete cds.
  • D49693 Nilaparvata lugens reovirus genome segment S1, complete sequence.
  • D49694 Nilaparvata lugens reovirus genome segment S2, complete sequence.
  • D49695 Nilaparvata lugens reovirus genome segment S3, complete sequence.
  • D49696 Nilaparvata lugens reovirus genome segment S4, complete sequence.
  • D49697 Nilaparvata lugens reovirus genome segment S5, complete sequence.
  • D49698 Nilaparvata lugens reovirus genome segment S6, complete sequence.
  • D49699 Nilaparvata lugens reovirus genome segment S7, complete sequence.
  • D49700 Nilaparvata lugens reovirus genome segment S9, complete sequence.

Niminivirus () - Unassigned Geminiviridae

  • JQ898332 Niminivirus isolate NimiV, complete genome.

Nipah virus (NiV) - Henipavirus

  • AF212302 Nipah virus, complete genome.

Nishimuro virus () - Unassigned Rhabdoviridae

  • AB609604 Nishimuro virus viral cRNA for hypothetical proteins, complete cds.

Nootka lupine vein clearing virus (NLVCV) - Carmovirus

  • EF207438 Nootka lupine vein-clearing virus, complete genome.

Northern cereal mosaic virus (NCMV) - Cytorhabdovirus

  • AB030277 Northern cereal mosaic virus genomic RNA, complete genome.
  • GU985153 Northern cereal mosaic virus isolate Hebei, complete genome.

Norwalk virus (NV) - Norovirus

  • AF093797 Norwalk virus, complete genome.
  • M87661 Norwalk calicivirus nonstructural polyprotein, 58 kd capsid protein and orf3 genes, complete cds.

Nounane virus () - Flavivirus

  • EU159426 Nounane virus polyprotein mRNA, complete cds.
  • FJ711167 Nounane virus isolate B31 polyprotein mRNA, complete cds.

Ntaya virus (NTAV) - Flavivirus

  • JX236040 Ntaya virus isolate IPDIA, complete genome.

Nyamanini virus () - Unassigned ssRNA- virus

  • FJ554526 Nyamanini virus isolate tick 39, complete genome.