Sequence of DPV Satsuma dwarf virus

Navel orange infectious mottling virus gene for polyprotein (coat protein region), partial cds.

ACC No: AB000282

Dated: 2008-12-03 | Length: 2409 | CRC: 207547803

                ID   AB000282; SV 1; linear; genomic RNA; STD; VRL; 2409 BP.
XX
AC   AB000282;
XX
DT   14-DEC-1998 (Rel. 58, Created)
DT   03-DEC-2008 (Rel. 98, Last updated, Version 3)
XX
DE   Navel orange infectious mottling virus gene for polyprotein (coat protein
DE   region), partial cds.
XX
KW   .
XX
OS   Navel orange infectious mottling virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales;
OC   Sadwavirus.
XX
RN   [1]
RP   1-2409
RA   Iwanami T.;
RT   ;
RL   Submitted (09-JAN-1997) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Toru Iwanami National Institute of Fruit Tree Science, Department
RL   of Citriculture,Okitsu; Okitsu, Shimizu, Shizuoka 424-02, Japan
XX
RN   [2]
RA   Iwanami T., Kondo Y., Makita Y., Azeyanagi C., Ieki H.;
RT   "The nucleotide sequence of the coat protein genes of satsuma dwarf virus
RT   and navel orange infectious mottling virus";
RL   Arch. Virol. 143:405-412(1998).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2409
FT                   /organism="Navel orange infectious mottling virus"
FT                   /host="Citrus unshiu"
FT                   /strain="NI-1"
FT                   /mol_type="genomic RNA"
FT                   /clone="NI8"
FT                   /db_xref="taxon:85516"
FT   CDS             <1. .2100
FT                   /product="polyprotein"
FT                   /note="polyprotein including coat protein"
FT                   /protein_id="BAA35113.1"
FT                   /translation="NVTIESGDNNNNNCPTGNVDNREIPVVEEEEERRRPHGSAIQRGF
FT                   AEFSERNENVIEHLYVPSMHGLSLREDIHLFTENLAIPSTADFCKELARYNVLAKATSF
FT                   KSASYYSRLLSGVAILRPHFKFTFRLVTPILESIPLLVVWDDLSELTTKVSRLSAAFQV
FT                   IDSDHTKAAVYEVRPSGPTDLLTPSKHNYGMGGDIVIFSGGYGSSSLTSALRLKVEASL
FT                   LKDSQLGSGEVSIPQGPSSMLSFSYLNEVDLGDLDLHCFLGSCKYNGTSPVGGRKYISV
FT                   CPAAGLVHNKGKAAYLGLTASLFSMYNFWRGSYILKVDVLSKGSCAGAISIYVPPPGTS
FT                   ADHYTQSQLDTLPRFELAWRGTGTARFEVENFSWVGWHITKPQRFTTNEDWFSLNSGLV
FT                   VVLNQPPTTRAGGSSDIRVMFRIVKFKNLTLRERSTTCDIFTGIKDSVYTHPLVDVLDE
FT                   NISAPASISTDPEVGFESTSSVQAASPLISKNFGAYYAYLLGGASSGKRWHSYVLPITM
FT                   GHHRSEIGSTKTGYLNEALDQTVRIRYSLRNPLHILCSAGAYYATDLLFTLVIDGDFTA
FT                   ERAYAQLGLIQTPLREFYEGYSTDRTLTSEGGSVNQLGVGKSYIQLLVPRRNYRARSIT
FT                   TETAALFIETIGSLSVRFTVSDKIKGVHLFVEAAGPIDIDGYGRGADIGFTESFVLMPS
FT                   LRTAA"
XX
SQ   Sequence 2409 BP; 600 A; 498 C; 565 G; 746 T; 0 other;

ab000282 Length: 2409  03-DEC-2008  Type: N  Check: 5536  ..

       1  aatgtcacca ttgaaagtgg tgacaataat aataataatt gtcccaccgg
      51  taatgtagat aatagagaaa taccggtggt tgaggaggag gaagagagaa
     101  ggcgcccaca tgggagtgcc attcagcgtg gttttgcaga attctcagag
     151  cgtaatgaaa atgtgataga gcatctatat gttccatcaa tgcacggatt
     201  atctttgcga gaagatatcc atttgtttac cgagaatttg gccatacctt
     251  caacagctga tttctgcaag gaattagctc gatataatgt cttggccaaa
     301  gccacaagtt ttaagagtgc aagctattat tcacgattac tttctggggt
     351  ggcgattctg cgacctcatt ttaaatttac gtttaggctt gttactccta
     401  tcctcgagtc cataccactt ctcgtagtct gggatgacct ttctgagctt
     451  acaaccaaag tttccagact ctcagccgcc tttcaagtaa ttgattcaga
     501  tcatacgaag gcggctgttt atgaagttcg tccatccgga ccaacggact
     551  tactcacccc aagcaaacat aattatggca tggggggaga tatagtcatc
     601  ttttccggtg ggtatggttc ttcctcgctg acttctgctt tgcgccttaa
     651  agtggaggcg agtctactga aggattcgca actaggatca ggagaagtta
     701  gtatacccca aggtccgtct tctatgcttt cattcagtta tcttaatgaa
     751  gttgatcttg gggacttaga tttacactgt tttttaggta gttgtaaata
     801  caatggtact tcgcccgttg gtgggcgaaa gtatatatcc gtgtgtcctg
     851  cggctggtct tgtacataat aagggtaaag ccgcttattt aggtcttacg
     901  gcttcccttt tttccatgta caatttttgg aggggaagct acattcttaa
     951  agtagatgtt ctttcaaagg ggagctgcgc tggagctata agtatttatg
    1001  ttcctccccc tggaaccagt gctgaccact atacgcagtc ccagttggac
    1051  accctcccca gatttgaatt agcctggagg ggaactggaa ctgcgagatt
    1101  tgaggtggaa aatttttcct gggttggttg gcatataacg aagccacaga
    1151  gattcaccac caatgaagat tggttttctt tgaactctgg actggttgtt
    1201  gtgctcaacc aacctccaac tactcgcgct ggaggttcta gtgatatacg
    1251  ggtcatgttc agaattgtta aatttaaaaa cctgaccctg agagaacgtt
    1301  ctactacctg tgatatattt acaggtatca aagactcggt gtatactcat
    1351  cccctggtgg atgttcttga cgagaacatt tcggcaccag catcgatttc
    1401  cactgaccct gaagtgggat tcgaatcaac atcgagcgtg caagcagctt
    1451  cgcccctaat cagcaaaaat tttggagcat actatgctta tctattgggt
    1501  ggggcaagct cagggaagag gtggcacagt tatgtgctac ctataacaat
    1551  gggacatcat aggagtgaaa ttgggagtac caagaccgga tatctcaacg
    1601  aagcacttga tcaaacggtc agaatcaggt attctttgcg gaacccattg
    1651  catattttat gttccgccgg ggcttattat gccaccgacc ttctctttac
    1701  tctggtaatt gacggagatt tcaccgctga acgagcctac gctcaattgg
    1751  gcctcataca aactcctctg agggagtttt acgagggtta ttcaaccgat
    1801  agaaccctca cttctgaagg gggttctgta aaccaattgg gtgtgggcaa
    1851  gtcatatatt caattacttg tcccgagaag gaattatagg gctagatcca
    1901  ttaccacgga aacagcagcc ttgtttatcg agactattgg atctctctcg
    1951  gtccgcttca ctgttagtga taagattaag ggagtccatt tattcgttga
    2001  ggctgctggc cctattgata ttgatggata tggacgagga gctgacattg
    2051  gattcactga atcttttgtt ctaatgccct ctcttcgtac cgctgcctaa
    2101  cttggtagca atgaggtgat gcccaccgga ccttaacgtg ggtttatgta
    2151  tgtatgtata tagtgaggtg tgtttctttt cttctctttt tggtgggata
    2201  ggtgtgcacc ctatcggttc cagtgcgcgt gctggaacat tgcaaagttt
    2251  tctgtcgtgt gtttactttg ttttcttttg tttgttttta tttaaaataa
    2301  actggatttc aatagagggt ttcttgaact cttccctctt ccgatccagg
    2351  agtttggtgt gtttttcttg atttctgcac cggtttcaat cagtgaaaat
    2401  ctgatggcc