Sequence of DPV Satsuma dwarf virus
Satsuma dwarf virus genomic RNA (RNA2) for polyprotein, complete cds.
ACC No: AB009959
Dated: 2005-01-19 | Length: 5344 | CRC: 813704090
!!NA_SEQUENCE 1.0
ID AB009959 standard; genomic RNA; VRL; 5344 BP.
XX
AC AB009959;
XX
SV AB009959.2
XX
DT 09-APR-1999 (Rel. 59, Created)
DT 19-JAN-2005 (Rel. 82, Last updated, Version 4)
XX
DE Satsuma dwarf virus genomic RNA (RNA2) for polyprotein, complete cds.
XX
KW .
XX
OS Satsuma dwarf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Sequiviridae;
OC SDV-like viruses.
XX
RN [1]
RP 1-5344
RA Iwanami T., Kondo Y.;
RT ;
RL Submitted (19-DEC-1997) to the EMBL/GenBank/DDBJ databases.
RL Toru Iwanami, National Institute of Fruit Tree Science, Department of
RL Citriculture,Okitsu; Okitsu, Shimizu, Shizuoka, 424-02, Japan
RL (E-mail:tiwsw37@okt.affrc.go.jp, Tel:81-543-69-7110, Fax:81-543-69-2115)
XX
RN [2]
RX MEDLINE; 99190442.
RX PUBMED; 10092021.
RA Iwanami T., Kondo Y., Karasev A.V.;
RT "Nucleotide sequences and taxonomy of satsuma dwarf virus";
RL J. Gen. Virol. 80:793-797(1999).
XX
FH Key Location/Qualifiers
FH
FT source 1. .5344
FT /db_xref="taxon:47416"
FT /mol_type="genomic RNA"
FT /organism="Satsuma dwarf virus"
FT /isolate="S-58"
FT /segment="2"
FT CDS 302. .5026
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q9WAL9"
FT /note="This polyprotein contains movement protein and coat
FT proteins"
FT /transl_table=1
FT /product="polyprotein"
FT /protein_id="BAA76747.1"
FT /translation="MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDGSVRIR
FT ELPVGLVLKGVMAQYRSILWTQFVADPATTTVDRKSFDFWLFCRRAEAAQERAFRARQS
FT KRAAKAAALDAEGLIDRSYKGRTYKVSVRGLSWKSVRAAQKAARKAAKNFGFTISENPF
FT SALPSEGRSAFSAGETPAPPACALPNICWAARRASAKSASPADVESLPFLGLLPESPRL
FT RNEGLLSLLRAKLADFKAARAPLVPIAKRVVKTPSEDSIWESVEKNAPIVGCVINGMVG
FT IPKNPIIQRLLPERKYIARKCVRAFVPQVMCSSRHKHDFAQLRNPDKWIVFPSVIRIST
FT VDAYATARRLGLINDCSSALERVKAFSSHHLDLEKEVSRLEREACAAPRKTIVARVFKF
FT FFEEYALAYDEVVERLRAAKEDRRREHLAFLRNIKRQAHELELKERQSFLVAIEEARIK
FT SLELKAKIEEGPPPQILYTPEWHVVQRAKAYADVTMSPSERDIAHLAYENKYVNARAYP
FT NTDVAAKFRARCDAHFERIFGYAVHRGTRTETLTQVAESPPPIITAPVGQRVGGNPPTE
FT TPGAAAVRAAMRRAVERNRPGPGESSAMPAREPLLSHRGQYYARSLSDRYNNICSRNNA
FT YDLMRETDVPIMEFTFGQQQDIAIPLSSRFGNHQSLHVGELEIAVQSSVLTGVDTAMAI
FT MVSDASHDRLEEGFLSLTILRLGAGWMRHTIPIGITVFPTDPLVDRFLRLSVLTGGSPM
FT ADGRQVARLHYGLLGQAYTGAGEQRLTQYATRRINVRQTHVTQFLEGNHIHIARSEDRQ
FT QPLPHMSLEFRPLSGSTRYVARPGGYQAIESGRQSVDITQNFIRMPTHLTRSATDREET
FT PAPNNPNEQNVGRSEINAEIPTNSAEEEERRRRTPHGSAIHRGYTEFSERNENLIEHLY
FT VPSMHGLSLKEDIHLFTKNLEIPSTADFCKELARYSGLTEAMSYRGASYYSRLLSGVAI
FT LRPHFKFTFRLVTPILESIPLFVVWDDLGQLNTKVSLLSSAFQVIDSDHTRAAVYEVRP
FT SGPTDLLTPSKANYGVGGDLVIFSGGYGSLSLSSPLRLKIEACLLKDTSLGSGEIALPQ
FT GPSSMLSFHYLNEVDLGDVNMHIFLGSCKYKSSSTVGGRKYISVCPAAGLVHKGGKAAY
FT LGLGASLFSLYNFWKGSYVLKVDVLSKGSCAGAISIYIPPPGSSADHYSQSQLDTLPRY
FT ELPWRGSGSARFEVENFSWIGWHLTKPQRYITNEDWFSLNAGLLVVLNQPPTTRTGGSS
FT DIRVIFRIVKFKNLTLKERSTTCDIFAGIKDSEYTDPLVDVLDENITAPSASSLTTVQD
FT PDLGLETTSSAQTSGLTTTRSFGAYYAYLLGGESAGNRWHSYVLPITMGHHREMIGASK
FT TGYLNTQLDETIRIRYSLRNPLHILCSAGAYYAVDLLFTLVVDGDHGAERAYTQLGLIQ
FT TPLMEYFDGYSASRNLSSEGGYSNQLGVGKSYVQLIVPRRNYRARSITTNTGALFFETI
FT GSLTVKFAVSAKIKGVHLYVEPVGPIDVDGYGRGADISLTNENFVLMPSLRTAA"
XX
SQ Sequence 5344 BP; 1264 A; 1232 C; 1317 G; 1531 T; 0 other;
AB009959 Length: 5344 January 25, 2005 09:06 Type: N Check: 4950 ..
1 ttgattcaag cgaagtggaa gccccacaca aaaatcattc tgttgtactc
51 tctctctctt tcactgagtc acatttactt ttgatgatga cttcttcttc
101 actttttctt tcgatgttcg ggatagcgcc cgttcaccac tgatactagg
151 gatagcgccc tagtttcgat tgctgggata gcgcccagtt tcttttgtta
201 atatttcgat attttcattt tgtaatttcg attacttttc ttttatataa
251 aaaccaaaaa gattttccta tttctttgat ttcttttttg tttatttctt
301 tatggagatc tacggattct cccccctctc cttccaggac accgagtcct
351 ggaagaactc tgctttcgca gcctgccgcg gctgcaagac ctaccccatc
401 gaggaggtag gtactgacgg atccgtgagg atccgggagc tcccggtggg
451 gctcgtacta aagggcgtca tggcccaata tcggtccatt ttatggaccc
501 aatttgtggc ggatcccgcc actaccaccg tggaccggaa gtcctttgac
551 ttctggctct tttgccgccg tgctgaggcg gcccaggaac gagcctttag
601 ggctcgtcag tccaagcgag ccgccaaggc cgctgccctc gatgctgagg
651 gcttaattga tcgctcctac aaggggcgaa cttacaaggt ctctgtgcgg
701 ggcctttcgt ggaaatctgt gcgggctgca cagaaggctg ccaggaaggc
751 agccaaaaat tttggattca ccatttcgga gaatcccttc tcggcactcc
801 catctgaagg gagatctgcc ttttctgcgg gtgaaactcc cgctcctcct
851 gcctgcgcgc tccccaatat ttgttgggcg gctcgcaggg cttccgcgaa
901 gtccgcctct cctgcggacg tagagagttt gccctttttg ggcttactcc
951 cggagtctcc ccgcctccga aatgaggggt tgctctcttt attgagagct
1001 aagttggccg acttcaaggc tgcgcgggca ccgttagtgc ccatagctaa
1051 gagggtcgtc aagacccctt ccgaagactc catctgggag tctgtggaga
1101 agaacgcccc gattgtcggg tgcgttataa atggtatggt tgggattccc
1151 aaaaacccaa tcattcagcg tcttctccct gagcgcaaat atattgcgcg
1201 caaatgcgtc cgggcttttg ttcctcaagt gatgtgttcg tcaagacaca
1251 aacatgactt tgcccagttg cggaatcctg ataagtggat tgttttccca
1301 tctgtgatta ggatttccac tgtggacgct tacgccacag ccaggcgcct
1351 tgggcttata aacgactgct cttcggctct cgagcgagtc aaggcatttt
1401 cctctcacca tctagactta gagaaggaag tgtctcgcct cgaacgagaa
1451 gcttgcgcag ccccgcggaa aacgatagtg gctagggtgt tcaaattctt
1501 ctttgaagaa tatgctctag catacgatga agtcgtggaa aggcttaggg
1551 ctgctaaaga ggataggcgc agggaacatt tggctttcct gcgcaatatt
1601 aagcgccagg ctcacgagct tgaattgaag gaacgccaat cttttttggt
1651 ggctattgaa gaagctcgta ttaagtccct tgagctcaag gctaaaattg
1701 aagagggtcc tccccctcaa attttatata ccccagagtg gcatgttgtt
1751 cagcgagcaa aagcttatgc tgatgttaca atgtcgccca gcgaaaggga
1801 tatagcgcat ttggcttatg aaaataagta cgtcaatgct cgtgcgtatc
1851 caaatacgga tgtcgctgcg aaatttagag cacgttgtga tgcgcatttt
1901 gaaaggattt tcggatatgc tgtgcaccga ggcacaagaa ccgaaacgtt
1951 gactcaggtt gctgagtctc ctccaccaat tatcactgcg cctgttgggc
2001 aaagggttgg aggaaatccg ccaacagaaa caccgggagc tgctgccgtg
2051 cgtgctgcaa tgcgacgtgc ggttgagcgc aatcgacctg ggcctggaga
2101 gtcatcggct atgccagctc gggagcccct cttgtctcat agagggcaat
2151 attatgcacg ctccctttcg gatagatata acaatatctg ctcgcgcaac
2201 aatgcctatg atttaatgcg cgagactgac gtgcccatta tggagtttac
2251 gtttgggcag cagcaagata ttgctattcc tctatcctcc cgattcggaa
2301 atcatcaatc tttgcacgtt ggtgaactgg aaattgccgt acaatcctcg
2351 gttttgaccg gagttgatac ggcgatggct ataatggttt ccgacgcctc
2401 ccatgatcgt cttgaagagg gatttttaag tctaactatt ttaagattgg
2451 gagccgggtg gatgcgccac actatcccca taggaattac agttttccca
2501 actgacccat tagtcgatag atttctgcga ttatcagttt tgactggtgg
2551 gtcacctatg gcggatggta ggcaagtggc cagattacac tatggattac
2601 ttggccaagc ctatacaggc gctggcgagc agcgattaac gcaatatgcc
2651 accagaagga taaatgtgcg ccaaacgcac gttactcagt ttctggaggg
2701 caaccatatc catattgctc gctccgagga tagacaacag ccactccctc
2751 atatgagttt ggagtttagg cctctatccg gaagcaccag gtatgttgca
2801 cgacctggag gatatcaagc tattgaaagt ggcaggcaga gtgtggatat
2851 cacgcaaaat tttattcgca tgcctacgca cttaacgcga agtgcaacgg
2901 atcgggagga aactccggca cccaacaatc caaatgagca gaatgttggc
2951 agaagcgaga tcaacgctga aatcccgaca aattctgccg aggaggagga
3001 aaggcgtcgg aggacgccgc atggatctgc tattcatcgg ggttatacag
3051 agttctccga acgtaacgaa aatctcattg aacatcttta cgttccgtct
3101 atgcatggtc tatctctcaa ggaagatata catcttttca ctaagaacct
3151 ggagataccg agtactgccg acttctgtaa ggaattggca agatactcgg
3201 gtttaacaga ggctatgagt tataggggtg caagctacta ttcacggctc
3251 ttgtccgggg ttgctatatt gcgtccccat ttcaagttta cttttagact
3301 tgtgacccct atccttgaat ccatacccct ttttgttgtc tgggatgatt
3351 tgggccaatt aaacactaag gtctccttat tatcttctgc ttttcaggtg
3401 atcgattccg atcatacgag ggcagcagtg tatgaggtta gaccttctgg
3451 gccaactgat ctccttaccc cttcgaaagc caactatggg gttggaggag
3501 atctagttat cttctcaggg ggttatggtt ccctctccct ctcctcacct
3551 ttgcgcctca aaattgaagc gtgtcttctt aaagacacga gtcttggatc
3601 tggtgagatt gctctacccc aaggtccatc ttctatgctc tcatttcatt
3651 atttgaatga ggtggatctt ggtgatgtga atatgcacat atttttaggt
3701 agttgtaagt ataaatcctc ttctaccgtt ggtggtagaa agtacatatc
3751 tgtgtgtcca gcagcgggtc ttgtacataa gggtgggaaa gctgcttatt
3801 taggtttagg agcttccctt ttttccttat ataatttttg gaaggggagc
3851 tatgttctca aggttgacgt tctgtcgaag ggtagttgcg ctggtgcgat
3901 atcaatttac attccgccac caggctcaag cgctgatcac tactctcaat
3951 cgcaactgga cactcttccc aggtatgagt tgccctggag aggttcggga
4001 tccgccagat tcgaagtcga aaatttttct tggattggtt ggcatctgac
4051 aaaaccgcag cgatatataa ccaatgagga ctggttttcg ctgaatgccg
4101 gtttgttggt tgttcttaat caaccaccta caactagaac tggcggttct
4151 agtgatataa gagtgatatt ccgaattgtt aaatttaaaa atctcactct
4201 taaagaacgt tcaacaacct gcgatatatt tgcaggtatt aaagactcgg
4251 agtatacaga tcctttagtg gacgtgctag atgaaaacat cacggcacca
4301 tccgcttctt cattgacgac ggtccaagat ccagaccttg gactggaaac
4351 tacttcgagc gcccagactt ctggactgac caccacgcgt agttttggag
4401 cgtattacgc ttatcttctt ggtggcgaaa gtgctggaaa taggtggcac
4451 tcttatgtgt tgcctattac tatgggacac cacagggaga tgataggagc
4501 atctaagact ggatatttaa atactcagct tgatgagacc atacggattc
4551 gctattcttt gcggaatccg ttacatattt tgtgctcagc tggagcgtat
4601 tatgcggttg acctcctatt tactcttgtt gtggacggtg atcatggagc
4651 cgaacgtgcc tacactcaac tgggtttaat tcaaacgcca ctcatggaat
4701 attttgatgg atattctgcg agtagaaatc tctcttcaga aggggggtat
4751 tcgaaccaat tgggtgtggg aaaatcttac gttcagttga ttgtcccacg
4801 aaggaactac agagctagat ctatcacgac taatactggt gcgctcttct
4851 ttgaaaccat tggatcgctg acggttaaat tcgctgttag cgctaagatc
4901 aagggagtac atctgtacgt tgagcctgta ggacctatcg atgttgatgg
4951 gtatgggcgg ggagcggaca tatctctaac taatgagaat tttgtcctga
5001 tgccatcgct gcgtacagct gcttaattgc ggcatttggt gttcccagtc
5051 ggacctttaa cactggggtt tgagaacgga aagaaatttt ctagggattt
5101 ctttcaattt aagtgatgcc caccggactt taacgtgggg ttatggcttc
5151 tctctgcggc ctgatgcaga gttgtacatt aataactagt gtgtttattt
5201 ttgtgtgttc gttttgtttg ttttgacata aaataaactg agtttcaaaa
5251 agggtttctc gagttcttcc ctttccgact caggagcttg gcgtgttttt
5301 cttgatttct gtcgccggtt tcaatcagtg aaagtctgat ggcc