Sequence of DPV Tomato spotted wilt virus

Tomato spotted wilt virus mRNA for N protein, complete cds.

ACC No: AB010997

Dated: 2007-08-18 | Length: 777 | CRC: -1966171514

                
ID   AB010997; SV 1; linear; mRNA; STD; VRL; 777 BP.
XX
AC   AB010997;
XX
DT   20-FEB-1998 (Rel. 54, Created)
DT   18-AUG-2007 (Rel. 92, Last updated, Version 3)
XX
DE   Tomato spotted wilt virus mRNA for N protein, complete cds.
XX
KW   .
XX
OS   Tomato spotted wilt virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-777
RA   Tsuda S.;
RT   ;
RL   Submitted (09-FEB-1998) to the EMBL/GenBank/DDBJ databases.
RL   Shinya Tsuda, Plant Biotechnology Institute, Ibaraki, Lab. of Biological
RL   Control; 3165-1 Ago, Iwama, Ibaraki 319-0292, Japan
RL   (E-mail:stsuda@mxj.meshnet.or.jp, Tel:81-299-45-8332, Fax:81-299-45-8351)
XX
RN   [2]
RA   Tsuda S., Fujisawa I., Nakano M., Hanada K., Kmeya-Iwaki M., Hidaka S.,
RA   Tomaru K.;
RT   "Nucleotide sequence of N protein and 3'non-coding region in S RNA of
RT   tomato spotted wilt tospovirus ordinary strain in Japan";
RL   Nippon Shokubutsu Byori Gakkaiho 60:375-375(1994).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato spotted wilt virus"
FT                   /segment="S"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:11613"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /product="N protein"
FT                   /note="nucleocapsid protein"
FT                   /db_xref="GOA:O55648"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:O55648"
FT                   /protein_id="BAA24895.1"
FT                   /translation="MSKVKLTKENIVALLTQGKDLEFEENQNLVAFNFKTFCLENLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 777 BP; 261 A; 129 C; 169 G; 218 T; 0 other;

ab010997 Length: 777  18-AUG-2007  Type: N  Check: 1010  ..

       1  atgtctaagg ttaagctcac taaggaaaac attgttgctt tgttgacaca
      51  aggcaaagac cttgaatttg aggaaaatca gaatctggta gcattcaact
     101  tcaagacttt ttgtctggaa aaccttgacc agatcaagaa gatgagcatt
     151  atttcatgtc tgacatttct gaagaatcgt cagagtataa tgaaggttat
     201  taagcaaagt gattttactt ttggtaaaat taccataaag aaaacttcag
     251  acaggattgg agccactgac atgaccttca gaaggcttga tagcttaatc
     301  agggtcaggc ttgtcgagga aactgggaat tctgagaatc tcaatactat
     351  caaatctaag attgcttctc accctttgat tcaagcctat ggattacctc
     401  ttgatgatgc aaagtctgtg aggcttgcca taatgctggg aggtagctta
     451  cctcttattg cttcagttga tagctttgaa atgatcagtg ttgtcttggc
     501  tatatatcag gatgcaaaat acaaagacct cgggatcgat ccaaagaagt
     551  atgacacaag ggaagcctta ggaaaagttt gcactgtgct gaaaagcaaa
     601  gcatttgaaa tgaatgaaga tcaggtgaag aaagggaaag agtatgctgc
     651  tatacttagc tccagcaatc ctaatgctaa aggaagtatt gctatggaac
     701  attacagtga aactcttaac aagttctatg aaatgttcgg ggttaaaaaa
     751  caggcaaaac ttgcagaact tgcttaa