Sequence of DPV Zucchini yellow mosaic virus
Zucchini yellow mosaic virus gene for cylindrical inclusion protein, partial cds, strain:M.
ACC No: AB020478
Dated: 2005-04-14 | Length: 2400 | CRC: 1839102816
!!NA_SEQUENCE 1.0
ID AB020478 standard; genomic RNA; VRL; 2400 BP.
XX
AC AB020478;
XX
SV AB020478.1
XX
DT 14-MAY-1999 (Rel. 59, Created)
DT 14-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Zucchini yellow mosaic virus gene for cylindrical inclusion protein,
DE partial cds, strain:M.
XX
KW cylindrical inclusion protein.
XX
OS Zucchini yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-2400
RA Ohshima K.;
RT ;
RL Submitted (25-NOV-1998) to the EMBL/GenBank/DDBJ databases.
RL Kazusato Ohshima, Saga University, Laboratory of Plant Virology, Faculty of
RL Agriculture; 1-Banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730, Fax:81-952-28-8709)
XX
RN [2]
RX MEDLINE; 20136277.
RX PUBMED; 10672346.
RA Kundu A.K., Ohshima K., Sako N., Yaegashi H.;
RT "Nucleotide sequences of the cylindrical inclusion protein genes of two
RT Japanese zucchini yellow mosaic virus isolates";
RL Acta Virol. 43(1):57-62(1999).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2400
FT /db_xref="taxon:12232"
FT /mol_type="genomic RNA"
FT /organism="Zucchini yellow mosaic virus"
FT /strain="M"
FT CDS <1. .>2400
FT /codon_start=1
FT /db_xref="GOA:Q9WA55"
FT /db_xref="HSSP:1HEI"
FT /db_xref="InterPro:IPR001410"
FT /db_xref="InterPro:IPR001650"
FT /db_xref="InterPro:IPR011545"
FT /db_xref="UniProt/TrEMBL:Q9WA55"
FT /transl_table=1
FT /gene="CYLINDRICAL INCLUSION GENE"
FT /product="cylindrical inclusion protein"
FT /protein_id="BAA77581.1"
FT /translation="ANKADENERTLMHMYHIFSKKQDDAPIYNDFLEHVRNVRPDLEET
FT LLYMAGAEVVSTQAKSAVQIQFEKIIAVLALLTMCFDAERSDAIFKILTKLKTVFGTVG
FT ETVRLQGLEDIESLEDDKRLTIDFDINTNEAQSSTTFDVHFDDWWNRQLQQNRTVPHYR
FT TTGKFLEFTRNTAAFVANEIASSSEGEFLVRGAVGSGKSTSLPAHLAKKGKVLLLEPTR
FT PLAENVSRQLAGDPFFQNVTLRMRGLSCFGSSNITVMTSGFAFHYYVNNPHQLMEFDFV
FT IIDECHVTDSATIAFNCALKEYNFAGKLIKVSATPPGRECDFDTQFAVKVKTEDHLSFH
FT AFVGAQKTGSNADMVQHGNNILVYVASYNEVDMLSKLLTERQFSVTKVDGRTMQLGKTT
FT IETHGTSQKPHFIVATNIIENGVTLDVECVVDFGLKVVAELDSENRCVRYNKKSVSYGE
FT RIQRLGRVGRSKPGTALRIGHTEKGIETIPEFIATEAAALSFAYGLPVTTHGVSTNILG
FT KCTVKQMRCALNFELTPFFTTHLIRHDGSMHPLIHEELKQFKLRDSEMVLNKVALPHQF
FT VSQWMGQSEYERIGVHVQCHESTRIPFYTNGIPDKVYERIWKCIQENKNDAVFGKLSSA
FT CSTKVSYTLSTDPAALPRTIAIIDHLLAEEMMKRNHFDTISSAVTGYSFSLAGIADSFR
FT KRYMRDYTAHNIAILQQARAQLLEFNSKNVNINNLSDLEGIGVIKSVVLQSKQEVSSFL
FT GLRGKWDGRKFANDVILAIMTLLGGGWFMWEYFTKKINEPVRVESKK"
XX
SQ Sequence 2400 BP; 750 A; 473 C; 555 G; 622 T; 0 other;
AB020478 Length: 2400 April 19, 2005 08:50 Type: N Check: 4931 ..
1 gcaaataaag ctgatgaaaa tgaaaggacg ttaatgcata tgtaccacat
51 tttcagcaag aaacaggatg atgcgcccat atacaatgac tttcttgaac
101 atgtgcgtaa tgtgagacca gatcttgagg aaaccctctt gtacatggct
151 ggcgcagaag ttgtttcaac gcaggctaag tcagcggttc agattcaatt
201 cgagaaaatt atagctgtgt tggcgctgct tactatgtgc tttgacgccg
251 aaagaagcga tgccattttc aagattttga caaaactcaa aacagttttt
301 ggcacggttg gagaaacggt ccgacttcaa ggacttgaag acattgaaag
351 cttggaggac gataaaagac tcacaattga ttttgatatt aatacgaacg
401 aggctcaatc gtcaacaaca tttgatgtcc attttgatga ctggtggaat
451 cggcaactac agcaaaatcg cacagttcca cattatagga ccacaggcaa
501 attccttgaa tttaccagaa atactgcagc ttttgtggcc aatgaaatag
551 catcatcaag tgagggagag ttcttagtta gaggagcagt aggttctgga
601 aaatcaacga gcttacctgc acatcttgcc aagaagggta aggtgttact
651 actcgaacct acacgcccac ttgcggaaaa tgttagcaga cagttagcag
701 gtgatccttt ctttcaaaac gttacactca gaatgagagg gttaagttgt
751 ttcggttcaa gcaatattac agtgatgacg agtggatttg cttttcacta
801 ctatgttaac aatccacatc aattaatgga atttgacttt gtcatcatag
851 acgaatgcca tgtcacagac agtgcaacca tagctttcaa ttgcgcactc
901 aaagagtaca actttgctgg caaattgatt aaagtgtctg caacgccgcc
951 agggagagag tgcgatttcg atacgcaatt cgcggtgaaa gtcaaaacag
1001 aggaccatct ttcattccat gcattcgttg gcgcacagaa gactggttca
1051 aatgccgata tggttcagca tggtaataac atacttgtgt atgttgcaag
1101 ttacaacgaa gtggacatgc tttccaagtt actcactgag cgccaatttt
1151 ctgttacaaa ggtagatggg cgaacaatgc agcttggaaa aactaccatt
1201 gaaacgcatg gaactagcca aaagccccat ttcatagtag ccacaaacat
1251 catcgagaat ggagtgacgt tggatgttga gtgtgttgtt gattttggac
1301 taaaagtggt cgcagaattg gacagcgaaa atcggtgtgt gcgctacaat
1351 aagaaatcag ttagttatgg agagaggatt cagcggctag gcagagtggg
1401 gagatctaag cctggaactg cattgcgtat agggcacaca gaaaaaggca
1451 tcgagaccat tcctgaattc attgccacag aagcagcagc cttatcattt
1501 gcatatgggc ttccagtcac cacacatgga gtttccacaa atatacttgg
1551 aaagtgcaca gttaaacaga tgaggtgtgc tttgaacttt gagctaactc
1601 ctttcttcac cactcattta atccgtcatg atggtagcat gcatccacta
1651 atacacgaag aattgaaaca gttcaaactc agggattcag aaatggtgct
1701 caacaaggtt gcattacctc atcaatttgt gagccaatgg atgggtcaaa
1751 gtgagtatga acgcattgga gtgcacgttc aatgtcatga gagcacacgc
1801 ataccttttt acacaaatgg aatacctgat aaagtctacg agagaatctg
1851 gaagtgcata caagaaaaca agaacgatgc ggtttttggt aagctttcaa
1901 gtgcttgttc aactaaggtt agttatacac ttagcactga tccagcagca
1951 ttacccagaa ctattgcaat catcgatcac ctgcttgccg aggaaatgat
2001 gaagcggaat cacttcgaca ctatcagctc agctgtaacg ggctattcat
2051 tttcccttgc tggaattgct gattctttca gaaagagata catgcgcgat
2101 tacacagcgc acaacattgc aattctccaa caagcacgtg cccagctgct
2151 tgaatttaat agtaaaaatg tgaacatcaa caacctgtcc gatttagaag
2201 gaattggagt cattaagtcg gtggtgttgc aaagtaagca agaggtcagc
2251 agcttcctcg gacttcgcgg taaatgggat ggacggaaat ttgcgaatga
2301 tgtgatattg gcgattatga cactcttagg aggtgggtgg ttcatgtggg
2351 aatacttcac gaaaaagatc aatgaacccg tgcgcgttga aagcaagaaa