Sequence of DPV Rotavirus A
Human rotavirus mRNA for NSP1, complete cds.
ACC No: AB022769
Dated: 2001-08-07 | Length: 1564 | CRC: 1541714548
!!NA_SEQUENCE 1.0
ID AB022769 standard; mRNA; VRL; 1564 BP.
XX
AC AB022769;
XX
SV AB022769.1
XX
DT 05-OCT-1999 (Rel. 61, Created)
DT 07-AUG-2001 (Rel. 68, Last updated, Version 2)
XX
DE Human rotavirus mRNA for NSP1, complete cds.
XX
KW NSP1.
XX
OS Human rotavirus A
OC Viruses; dsRNA viruses; Reoviridae; Rotavirus; Rotavirus A.
XX
RN [1]
RP 1-1564
RA Taniguchi K.;
RT ;
RL Submitted (24-JAN-1999) to the EMBL/GenBank/DDBJ databases.
RL Koki Taniguchi, Fujita Health University, School of Medicine; Department of
RL Virology and Parasitology, Toyoake, Aichi 470-1192, Japan
RL (E-mail:kokitani@fujita-hu.ac.jp, Tel:81-562-97-2467, Fax:81-562-97-4008)
XX
RN [2]
RX MEDLINE; 99411364.
RX PUBMED; 10481750.
RA Okada J., Kobayashi N., Taniguchi K., Shiomi H.;
RT "Functional analysis of the heterologous NSP1 genes in the genetic
RT background of simian rotavirus SA11";
RL Arch. Virol. 144(7):1439-1449(1999).
XX
DR GOA; Q9QNA9.
DR SPTREMBL; Q9QNA9; Q9QNA9.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1564
FT /db_xref="taxon:10941"
FT /mol_type="mRNA"
FT /sequenced_mol="cDNA to mRNA"
FT /organism="Human rotavirus A"
FT /strain="KU"
FT CDS 31. .1491
FT /codon_start=1
FT /db_xref="GOA:Q9QNA9"
FT /db_xref="SPTREMBL:Q9QNA9"
FT /transl_table=1
FT /gene="NSP1"
FT /product="NSP1"
FT /protein_id="BAA84966.1"
FT /translation="MATFKDACYHYKRINKLNNTVLKLGVNDTWRPSPPTKYKGWCLDC
FT CQHTDLTYCRGCTMYHVCQWCSQYGRCFLDNEPHLLRMRTFKNEVTKDELKNLIDMYDT
FT LFPMNQKIVCRFISNTRQHKCRNECMTQWYNHLLMPITLQSLAIELDGDIYYVFGYYDN
FT MNSINQTPFSFTNLVDIYDKLLLDNVNFVRMSFLPASLQQEYALRYFSKSRFISEQRKC
FT VNDSHFSINVLENLHNPNFKIQITRNCSEMSFDWNEACKLVKNAGAYFDILKTSHIEFY
FT SVSTRCRIFTQCKLKIASKLIIPNYITSNHKTLATEVHNCEWCSVNNSYTVWNDFRIKK
FT IYDKVFNFLRAFSKFNINIGHCSSQEKMYEYVEDVLNVCNDERWKTSIIEIFNCLEPVE
FT LDDVKYVLFNHEINWDVINVLVHSIGKVPQILTLENVITIIQSIIYEWFDIRYMRNTPM
FT VTFTIDKLRRLHTGLKTVEDDSGISDVE"
XX
SQ Sequence 1564 BP; 578 A; 209 C; 267 G; 510 T; 0 other;
AB022769 Length: 1564 January 8, 2004 16:01 Type: N Check: 3596 ..
1 ggcttttttt tgaaaagtct tgtggaagcc atggctactt ttaaagatgc
51 ttgttatcat tacaaaagaa ttaacaaatt gaataataca gtcttaaaat
101 taggagttaa tgatacatgg agaccgtcac ctccaactaa gtataaagga
151 tggtgtttgg attgttgcca acatactgac ttaacttatt gtagaggttg
201 taccatgtat catgtttgtc aatggtgcag tcaatatggt agatgctttc
251 ttgataatga accacattta ttaaggatga gaacttttaa aaatgaagta
301 acaaaagacg aattgaagaa tttaattgat atgtatgaca cactattccc
351 tatgaaccag aaaatagtat gtagattcat tagcaatacg agacaacata
401 aatgtagaaa cgaatgtatg acacagtggt acaatcattt actaatgccg
451 ataacattac aatccctggc aattgaatta gatggtgaca tttattacgt
501 atttgggtat tatgataaca tgaatagtat taatcaaact ccattctcat
551 ttacaaattt agtagatata tacgataaat tattacttga taatgtgaat
601 tttgttagaa tgtcattctt accagcatct ctacagcaag aatatgcact
651 tagatatttt tctaagtcaa gatttataag cgaacaaagg aaatgtgtta
701 atgattcaca cttttcaatt aatgtgttag agaacttaca taatccaaat
751 ttcaaaatac agattacacg taactgtagc gaaatgtctt ttgattggaa
801 tgaagcatgt aagcttgtta aaaacgccgg tgcgtatttt gacatactaa
851 aaacatcaca cattgaattt tatagtgttt ctactagatg tagaatattc
901 acacaatgta aacttaaaat agcatctaaa ttaatcatac caaactatat
951 aacctcgaat cataaaacgt tagctactga ggtgcacaat tgtgaatggt
1001 gttcagttaa taatagttac actgtatgga atgatttcag aattaagaaa
1051 atatatgata aagttttcaa ttttctacga gcttttagta aattcaatat
1101 taatattgga cattgttcat cacaggaaaa gatgtatgaa tatgttgaag
1151 atgttctgaa tgtgtgtaat gacgaaagat ggaaaacgtc aataatagaa
1201 atttttaatt gtctagaacc agtagagctt gatgatgtca agtatgtttt
1251 atttaatcat gaaataaatt gggacgtgat taacgtattg gttcatagta
1301 ttggtaaagt accacaaata ttaactttgg agaatgttat tacaatcata
1351 caatctatca tatatgaatg gtttgatata agatacatga ggaatacacc
1401 aatggttaca tttacaattg ataaattaag acgattacat acaggattaa
1451 agactgttga agatgattct ggcatatctg atgttgaata gtaaaagaaa
1501 aattacgttt gccaccacaa gactccctgt actagagtag cgcctaggca
1551 aaatactgtg aacc