Sequence of DPV Satsuma dwarf virus
Navel orange infectious mottling virus gene for polyprotein (RNA dependent RNA polymerase region), partial cds.
ACC No: AB022887
Dated: 2003-07-07 | Length: 2839 | CRC: 1444658619
!!NA_SEQUENCE 1.0
ID AB022887 standard; RNA; VRL; 2839 BP.
XX
AC AB022887;
XX
SV AB022887.1
XX
DT 03-FEB-1999 (Rel. 58, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE Navel orange infectious mottling virus gene for polyprotein (RNA dependent
DE RNA polymerase region), partial cds.
XX
KW polyprotein.
XX
OS Navel orange infectious mottling virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Sequiviridae;
OC SDV-like viruses.
XX
RN [1]
RP 1-2839
RA Iwanami T.;
RT ;
RL Submitted (27-JAN-1999) to the EMBL/GenBank/DDBJ databases.
RL Toru Iwanami, National Institute of Fruit Tree Science, Department of
RL Citriculture,Okitsu; Okitsu, Shimizu, Shizuoka 424-0292, Japan
RL (E-mail:tiwsw37@okt.affrc.go.jp, Tel:81-543-69-7110, Fax:81-543-69-2115)
XX
RN [2]
RA Karasev A.V., Iwanami T.;
RT "Phylogeny and Evolution of Plant Picorna-like Viruses";
RL Unpublished.
XX
DR GOA; Q9YZ97.
DR SPTREMBL; Q9YZ97; Q9YZ97.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2839
FT /db_xref="taxon:85516"
FT /mol_type="genomic RNA"
FT /organism="Navel orange infectious mottling virus"
FT /isolate="NI-1"
FT CDS <1. .2619
FT /codon_start=1
FT /db_xref="GOA:Q9YZ97"
FT /db_xref="SPTREMBL:Q9YZ97"
FT /note="RNA dependent RNA polymerase region"
FT /transl_table=1
FT /product="polyprotein"
FT /protein_id="BAA74537.1"
FT /translation="ENFDLDQNMSIIVHNSVYSFVLRPGAITYKRYNAPNLVDKVHELV
FT RVNLPKNRGFSLDVRAQFSEDFYDNGTAMKCWVVPNKNPAVADVMHRVDCEKSTQIIDI
FT FASELSRSGGCEPVRQTQRFIYADGPARNGHCGRLLCANLSGHWRVIGMCAGEGKNKGG
FT ITKALYADIPHEFLKEENVAAVLRGAEIEDIRILDRFAVTIQENVRELTPMTKCLGRVA
FT GQSYPRALRKTSIVPSLIHEHLWRKPETEPTVLGKSDKRTPYPYDPYTTISDKFVEEVG
FT PIDISEGSDASLVLANIGSSWKAAGEIQCSTVLSWEVAINGNPAIPYCERLPMSTSEGY
FT PDSVAGTSERKGTRRFFELEGGDARVPTPALMTELEVLERELQKEEVCLTCINTACAKD
FT EKTTSHKVRVEPKTRIFEILPFQINIIIRRYFMFWMQLLMAAHDQLPSKVGLNVYSESW
FT DILLGRHTRLANHFTGDYSGFDTSTPRILVYAIVDKINELAGDSEMNQRTRRNIIRFVL
FT NRYLISDGYVYEIHGGTPSGFAPTVMINSIVNEFYLKWSWMGLMKEAGYAKEASLYAFH
FT EATEISLYGDDNFVSVATPVASLYNLKTISEFLRRIGVKLGDGAKTGITKPFIPLEEVD
FT FLKRQFVADAGSTAILCPLKKISIEERLFYVKGGQDELAALELNMATALCEAFFHGKEY
FT FRFLEAEILKAVRKSRISLTKPLPTMESIRVWYLSQRTNTKVRSPSYEGLGTMSGILAV
FT GVSEARIVGKITFYSGPEFQGRVESHLKVIPTYIPGGWKVGKDKQIYISFVRDATKMAK
FT IIESVDLFECVVATDKAMAYLVAICMAYKHKQISRMEVRCHVQNLKTADALLCNEICNN
FT L"
XX
SQ Sequence 2839 BP; 781 A; 568 C; 692 G; 798 T; 0 other;
AB022887 Length: 2839 July 15, 2003 09:01 Type: N Check: 8709 ..
1 gagaactttg acctggatca aaacatgagc attatcgttc acaatagtgt
51 ctatagtttt gttttgagac cgggtgccat cacgtataag cgatacaatg
101 cacctaattt agtcgataag gtgcatgaat tggtgcgcgt caacctgccc
151 aaaaatagag gtttctcctt agatgtgcgc gcccaattca gcgaagattt
201 ctacgataat ggtactgcca tgaaatgttg ggtagtacct aacaaaaatc
251 ccgccgtcgc tgatgtgatg catagagttg actgtgagaa gagcacgcaa
301 attattgata tttttgcttc tgaattatca cggtcaggtg gatgcgagcc
351 ggtcaggcaa actcaaagat tcatctatgc tgatggacca gctcgcaatg
401 gtcattgtgg tcgcctcctg tgcgccaatc tgtccggaca ctggcgtgtt
451 attggcatgt gcgccggtga agggaaaaat aaaggaggca tcaccaaagc
501 cctctatgct gatataccgc acgaattctt gaaagaagag aacgtagcag
551 cggttttgag gggggctgaa attgaggata tccgcatttt ggatcgtttt
601 gctgtgacga ttcaagagaa cgtccgcgaa ctcaccccga tgaccaaatg
651 tttgggtaga gttgctggac aaagttatcc tagggctctg aggaaaacgt
701 caatagttcc ttcacttata catgaacatc tttggaggaa accagagact
751 gagcccactg ttcttgggaa atcggataag cggactccgt atccctacga
801 tccatatacc acgataagcg ataaattcgt ggaagaagtt ggcccaattg
851 atatttcgga gggttccgat gcctccctgg ttttggctaa cataggatcg
901 tcttggaaag ctgctggtga aattcaatgt agtaccgtcc tctcttggga
951 ggtagcaatc aatggaaacc cagcaattcc gtattgtgaa cgcttgccca
1001 tgtccacctc tgaaggatat cctgactctg tagcaggcac ttcggagaga
1051 aagggaacga ggagattctt cgaattggaa ggaggcgatg cgagagttcc
1101 cactccagca ttaatgactg agctggaggt tctggaaagg gaactgcaaa
1151 aagaagaagt ttgtcttaca tgtatcaaca cagcatgtgc taaagatgaa
1201 aagacaactt cccataaggt tagggttgaa ccgaaaaccc gcatttttga
1251 aatcctcccg tttcaaatta atattattat ccggaggtat ttcatgttct
1301 ggatgcagct actgatggct gcacacgatc agctgccgag caaagtgggt
1351 ctgaatgtct actctgaaag ctgggacatt ctgctcggga ggcacacccg
1401 attagcgaat cacttcacag gtgattactc gggatttgac acctcgaccc
1451 ctcggatcct agtctatgca atagttgata aaatcaatga attggctgga
1501 gattccgaga tgaatcagcg cactcgtcgt aacataatca gatttgtatt
1551 aaatagatat cttatatctg atggttatgt ttacgaaatt catggtggaa
1601 ccccatccgg ttttgcgccc actgtaatga taaattctat tgtgaatgaa
1651 ttttatctta aatggagctg gatgggattg atgaaagagg cgggatatgc
1701 aaaagaagct tcactttatg ccttccatga agccactgaa atttctctat
1751 atggggatga caatttcgtt tcagtggcta ctccggtagc ttctttgtat
1801 aatcttaaga cgatctctga attcctgaga agaatagggg ttaagctcgg
1851 tgacggagca aagactggta ttacaaaacc ctttattcct cttgaagagg
1901 ttgattttct gaagaggcag tttgttgctg atgccgggtc aacggcaata
1951 ctgtgccctc ttaagaagat ctctattgaa gagagattgt tttacgttaa
2001 aggaggacag gacgaattgg ccgctttaga gttgaatatg gccacagccc
2051 tgtgtgaggc tttcttccac ggaaaagagt atttccgctt tctagaagcg
2101 gaaattctta aggcggtaag aaaaagcagg attagcctca ctaagcctct
2151 acccaccatg gaatctataa gggtgtggta cctgtcacag agaacaaata
2201 caaaggtacg ctcgccctcc tacgaaggac ttggcacgat gtctggtatt
2251 cttgctgttg gagtatcaga agctagaatc gtagggaaaa tcactttcta
2301 ttctggccct gaattccaag gaagggtgga atctcaccta aaggtgattc
2351 ctacttatat cccaggggga tggaaagttg gtaaagacaa gcagatctac
2401 atctcttttg tgcgagatgc tactaagatg gctaaaatca tcgagagtgt
2451 ggatttgttc gagtgcgttg ttgctactga caaggcaatg gcatatcttg
2501 ttgcgatctg catggcatac aaacataagc aaatttccag aatggaagtt
2551 agatgccatg ttcagaatct taaaactgcg gacgcgctgt tgtgcaacga
2601 gatctgcaac aatctgtaga aatacagaat tgggtgttgc ccaccggacc
2651 ttaacgtggg tttttctgta caaagttttc cgttgtgtgc ttactttgtt
2701 ttcttttgtt tgttttaatt taaaataaac tggatttcaa tagagggttt
2751 cttgaactct tccttcttcc gatcccagga gtttggtgtg tttttcttga
2801 tttctgcacc ggtttcgatc agtgaaaatc tgatggccc