Sequence of DPV Barley yellow mosaic virus

Barley yellow mosaic virus RNA-1 for capsid protein, partial cds.

ACC No: AB023594

Dated: 2003-07-07 | Length: 894 | CRC: 2037399734

                !!NA_SEQUENCE 1.0
ID   AB023594   standard; RNA; VRL; 894 BP.
XX
AC   AB023594;
XX
SV   AB023594.1
XX
DT   05-DEC-2000 (Rel. 66, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Barley yellow mosaic virus RNA-1 for capsid protein, partial cds.
XX
KW   capsid protein.
XX
OS   Barley yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
XX
RN   [1]
RP   1-894
RA   Lee K., Kashiwazaki S.;
RT   ;
RL   Submitted (11-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL   Satoshi Kashiwazaki, National Agriculture Research Center, Department of
RL   Plant Protection; 3-1-1 Kannondai, Tsukuba, Ibaraki 305-8666, Japan
RL   (E-mail:skashiwa@narc.affrc.go.jp, Tel:81-298-38-8932, Fax:81-298-38-8929)
XX
RN   [2]
RA   Lee K., Kashiwazaki S.;
RT   "Sequence analysis of the 3'-terminal regions of RNA-1 of Korean isolates
RT   of barley yellow mosaic virus";
RL   Unpublished.
XX
DR   GOA; Q9DUL3.
DR   SPTREMBL; Q9DUL3; Q9DUL3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .894
FT                   /db_xref="taxon:12465"
FT                   /mol_type="genomic RNA"
FT                   /organism="Barley yellow mosaic virus"
FT                   /dev_stage="Bukok"
FT                   /segment="1"
FT   CDS             <1. .894
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9DUL3"
FT                   /db_xref="SPTREMBL:Q9DUL3"
FT                   /transl_table=1
FT                   /product="capsid protein"
FT                   /protein_id="BAB18752.1"
FT                   /translation="AADPLTDAQKEDARIAAADRARFELADADRRRKVEADRVEAARVK
FT                   KAADAALKPVNLTATRMPTEDDGKLKTPSGARIPSSAADGNWSVPATKQVNAGLTLKIP
FT                   LNKLKSVPKSVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDALIPFIGWCCNNGT
FT                   SDKHAENQVMQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVA
FT                   HWSMKHGASANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRK
FT                   TTNHRVLDSDGHPELT"
XX
SQ   Sequence 894 BP; 281 A; 223 C; 202 G; 188 T; 0 other;

  AB023594  Length: 894  July 15, 2003 09:16  Type: N  Check: 3752  ..

       1  gctgccgatc ctctcactga tgcacaaaaa gaagatgcac gcattgctgc
      51  agctgataga gcacgcttcg aactagccga cgctgatcgt agacgtaaag
     101  ttgaggccga ccgtgtggaa gcggcaagag tcaaaaaggc agctgatgct
     151  gcactaaaac cagttaacct aacagcaaca cgcatgccca cagaagatga
     201  tggcaaactt aaaacaccat ctggcgctag aataccatca tcagctgcag
     251  atggtaactg gagcgtgcca gcaacgaagc aagttaacgc tggtttgaca
     301  cttaaaattc ccctgaataa gctcaaaagt gtacctaagt ctgttatgga
     351  gcataacaac tcagtcgcac tcgaatctga gctaaaagcc tggactgatg
     401  ctgtgcgcac aagtttaggt atcacaactg atgaggcatg gatcgatgcc
     451  ctcattccct tcatcggatg gtgctgcaac aatggcacct cagacaagca
     501  tgctgagaat caagtaatgc aaattgacag cggaaaggga gctgtcacag
     551  agatgagtct gtccccattt attgttcatg ctcgaatgaa tggtggactc
     601  cgaaggatca tgcgcaacta cagtgatgaa accgtcttac tcatcacaaa
     651  caacaaacta gttgcacatt ggtcaatgaa gcatggcgct tctgcaaacg
     701  caaaatacgc tttcgatttc ttcgtcccac gatcatggat gaacccacag
     751  gatatcgaag tgtcaaagca agcgcgctta gcagcacttg gaactggaac
     801  gtataacacc atgttaactt ccgacactac caatctgcgt aagacaacca
     851  accacagggt tctggactca gatggacacc cagaactaac ctaa