Sequence of DPV Torque teno mini virus 6
Torque teno mini virus 6 DNA, complete genome, isolate: TLMV-CBD203.
ACC No: AB026929
Dated: 2009-11-02 | Length: 2897 | CRC: 157340981
ID AB026929; SV 1; circular; genomic DNA; STD; VRL; 2897 BP.
XX
AC AB026929;
XX
DT 24-NOV-1999 (Rel. 61, Created)
DT 02-NOV-2009 (Rel. 102, Last updated, Version 4)
XX
DE Torque teno mini virus 6 DNA, complete genome, isolate: TLMV-CBD203.
XX
KW .
XX
OS Torque teno mini virus 6
OC Viruses; ssDNA viruses; Anelloviridae; Betatorquevirus.
XX
RN [1]
RP 1-2897
RA Mishiro S.;
RT ;
RL Submitted (06-MAY-1999) to the EMBL/GenBank/DDBJ databases.
RL Contact:Shunji Mishiro Toshiba General Hospital, Department of Medical
RL Sciences; 6-3-22 Higashi Oh-i, Shinagawa, Tokyo 140-8522, Japan
XX
RN [2]
RX DOI; 10.1007/s007050050689.
RX PUBMED; 10881684.
RA Takahashi K., Iwasa Y., Hijikata M., Mishiro S.;
RT "Identification of a new human DNA virus (TTV-like mini virus, TLMV)
RT intermediately related to TT virus and chicken anemia virus";
RL Arch. Virol. 145(5):979-993(2000).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2897
FT /organism="Torque teno mini virus 6"
FT /host="Homo sapiens"
FT /isolate="TLMV-CBD203"
FT /mol_type="genomic DNA"
FT /note="isolated from human serum"
FT /note="originally submitted as 'TTV-like mini virus'"
FT /db_xref="taxon:687374"
FT CDS 334. .627
FT /codon_start=1
FT /note="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:Q9QU37"
FT /protein_id="BAA86944.1"
FT /translation="MNFEYPDYSPKELQLQWINNIVHTHDLLCKCTKPLEHTIHGIIKQ
FT EPNLRLEKETKKLLEKCLTSTEDGSLVEDALDGLGDGELEALFAENTGEDTG"
FT CDS 516. .2486
FT /codon_start=1
FT /note="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:Q9QU36"
FT /protein_id="BAA86945.1"
FT /translation="MPYFYRRWFPRRRRFRRSWRRRIRGPFRRKYWRRHWVRRYSRKRK
FT LSKLNIKEWQPITIRKTKVKGLYPAFLCNDQRIGNNAIQYLDSIAPHHFPGGGGFGIIQ
FT FTLQGLYEQFIKATNWWTQTNCSLPLIRYNFCKLKFYRTANVDYVVKIIRCYPLKATHD
FT LYMQTQPSILMRDKHSILIPCMKNGRNRKTYKTIKVRPPTQMTNGWFFQKDLCNFPLLV
FT ILATAASFDRYYTNSKAKSTTIGFISLNTLTFQYHNWQDPPTTGYKPQDNMWFWGTLNG
FT SDDPNEEPLTNLIYLGGTNNHTKGIPVKNQSNYASQPNMWGNIFHEDYLFGTSQIYVSN
FT KTPQEVVNYIVSHQTQKVKEYTGITPRTLPLTVECRYNPFNDKSTGNNTFFVSNHADQT
FT KWQPIDNPDTQTPNLPIWLTTWGLMDWYKKAGIISQPELNYMVVFECPYISSNPKLKYY
FT VPIDDTMQTGQSPYIEVLSQSDEKHWYPKGSFQIKTLNTITSCGPGTVKLDNDKSCEAH
FT FEYDFRFKIGGCPPAMEKLCDPSKQNKYPIPNTKLQTTSLQIPASAIETYLYNFDERKG
FT LLTEKATKRIKKDYGTEQTILPFTGTAMDLPTPIQSPPQDQTSSEEEEETTQELQLIRL
FT RRKQRLLKQRILQLLDIQSIE"
FT CDS 2044. .2466
FT /codon_start=1
FT /note="ORF3"
FT /db_xref="InterPro:IPR008474"
FT /db_xref="UniProtKB/TrEMBL:Q9QU35"
FT /protein_id="BAA86946.1"
FT /translation="MINLVKHILNMTFVLRLEDVPLQWKNSVTLQNKTNIPYPILSSKQ
FT LRYRFQHQPLKPISTTLTKEKDSLQKKLLNESKKTMELNKLFCRLQEQQWTSRHQSKAH
FT HRTKHRQRKKKRRHKSSSSSDSEGNNDSSSSESSSY"
FT polyA_signal 2722. .2727
FT repeat_region 2819. .2843
FT /gene="DR1"
FT /note="direct repeat"
FT repeat_region 2844. .2870
FT /gene="DR2"
FT /note="direct repeat"
FT repeat_region 2871. .2897
FT /gene="DR3"
FT /note="direct repeat"
XX
SQ Sequence 2897 BP; 1127 A; 640 C; 443 G; 687 T; 0 other;
ab026929 Length: 2897 02-NOV-2009 Type: N Check: 9724 ..
1 atataaatat tcataaagga aaccactaat tagaattgcc gaccacaaac
51 agacatatgc aaattaactt ccgtaaaaca cacacttact tccccaaaaa
101 ttaattagta atcaccatca tttccgtgag tcacaacaac tataaaacta
151 actacaatga cgaatggctg agtttatgcc gctagacgga gagaagacag
201 gttactgatc ttcgctaact cagggcggga gccgaaggtg agtgaaacca
251 ccgaagtcta ggggcaattc gggctgagtt agtctagcgg accgggcaag
301 aaacttaaaa taacaataat tattttatta cagatgaact ttgagtatcc
351 ggactactca ccaaaagaac tacaactaca atggattaac aacattgttc
401 atactcacga cctgctctgc aaatgcacca aaccacttga acatacaatt
451 catggaatta taaaacaaga accaaacctt cgcctggaaa aagaaacaaa
501 aaaattactt gaaaaatgcc ttacttctac agaagatggt tccctcgtag
551 aagacgcttt agacggtctt ggagacggag aattagaggc ccttttcgca
601 gaaaatactg gagaagacac tgggtaagac gctattctcg aaagagaaaa
651 ctttctaaat taaacatcaa agaatggcaa cccataacaa ttagaaaaac
701 aaaagtaaaa ggactttacc cagcatttct atgtaatgat caaagaatag
751 gcaataatgc cattcaatac ttagactcta tagcacctca ccattttcct
801 ggaggaggag gatttggaat aatacaattt actttgcaag gcctttatga
851 acaatttata aaagcaacaa actggtggac tcaaacaaac tgttctttac
901 ctttaataag atataacttt tgtaaactaa aattttatag aactgcaaat
951 gttgactatg ttgttaaaat aataagatgt tatcctttaa aagctacaca
1001 tgatctttat atgcaaactc aaccaagtat attaatgaga gataagcaca
1051 gcatattaat tccttgcatg aaaaacggta gaaaccgcaa aacttacaaa
1101 acaataaaag ttaggccacc cacacaaatg acaaacggtt ggttctttca
1151 aaaggacctt tgcaactttc cgcttttagt aatactagct actgcagcaa
1201 gctttgaccg ttactacaca aactctaaag ctaaatcaac aactataggc
1251 tttatttcac taaacacttt aacatttcaa taccataatt ggcaagaccc
1301 cccaaccaca ggctataaac cacaagacaa catgtggttt tggggaacac
1351 taaatggatc agacgatcca aatgaagaac ctttaacaaa cctaatttac
1401 ttaggaggca ctaataacca caccaaagga attccagtta aaaatcaatc
1451 caactatgca tcacaaccaa atatgtgggg caatatattt catgaagact
1501 atttatttgg aacatcacaa atatatgtta gtaacaaaac acctcaagaa
1551 gtagtaaatt acatagtgag tcaccaaact caaaaagtaa aagagtacac
1601 tggaataact ccaagaacac tgcctctaac agtagaatgc agatacaatc
1651 catttaatga caaatccaca ggtaacaaca cattttttgt aagcaaccac
1701 gcagatcaaa ctaaatggca accaatagac aacccagata cacaaacacc
1751 taatttacca atatggttaa caacatgggg cttaatggac tggtataaaa
1801 aagcaggaat aataagccag cctgaactaa actatatggt agtttttgaa
1851 tgtccatata taagtagtaa cccaaaacta aaatattatg tacctataga
1901 tgacacaatg caaactggac aaagtccata catagaagta ctatcacaat
1951 cagatgaaaa acattggtac ccaaaaggct cttttcaaat taaaacttta
2001 aatactataa catcatgtgg cccaggtact gtaaaattag ataatgataa
2051 atcttgtgaa gcacattttg aatatgactt tcgttttaag attggaggat
2101 gtccccctgc aatggaaaaa ctctgtgacc cttcaaaaca aaacaaatat
2151 cccataccca atactaagct ccaaacaact tcgttacaga ttccagcatc
2201 agccattgaa acctatctct acaactttga cgaaagaaaa ggactcctta
2251 cagaaaaagc tactaaacga atcaaaaaag actatggaac tgaacaaact
2301 attttgccgt ttacaggaac agcaatggac ctcccgacac caatccaaag
2351 cccaccacag gaccaaacat cgtcagagga agaagaagag acgacacaag
2401 agctccagct catcagactc cgaaggaaac aacgactcct caagcagcga
2451 atcctccagc tattagacat acaaagtata gaataattca cagtaaagta
2501 aaaatagata tgtttggaga aagacctcct aaaaacagga gaatgactcc
2551 tcaagaaaga gaagaagagc tactactagc taaaatattt caaagacctc
2601 caagagacta tatactagac cgcccatttt acccctacgt accaactcct
2651 ccacaaaaat acatggtaaa ctttgacctt aatcctcccc tataaacacc
2701 tatgtaaata ttcaactctt caataaacaa ggccagcaaa tattcacttg
2751 tcggtgtcca tttattaaag tttcaactta aataaacatc caccactctc
2801 ccaagtatgc aggcctaaaa aggggctccg ccccttaaac ccctaggggg
2851 ctccgccccc taaaaccccc aagggggctc cgccccctta caccccc