Sequence of DPV Torque teno mini virus 1
Torque teno mini virus 1 DNA, complete genome, isolate: TLMV-CBD279.
ACC No: AB026931
Dated: 2009-11-02 | Length: 2856 | CRC: -140435105
ID AB026931; SV 1; circular; genomic DNA; STD; VRL; 2856 BP.
XX
AC AB026931;
XX
DT 24-NOV-1999 (Rel. 61, Created)
DT 02-NOV-2009 (Rel. 102, Last updated, Version 4)
XX
DE Torque teno mini virus 1 DNA, complete genome, isolate: TLMV-CBD279.
XX
KW .
XX
OS Torque teno mini virus 1
OC Viruses; ssDNA viruses; Anelloviridae; Betatorquevirus.
XX
RN [1]
RP 1-2856
RA Mishiro S.;
RT ;
RL Submitted (06-MAY-1999) to the EMBL/GenBank/DDBJ databases.
RL Contact:Shunji Mishiro Toshiba General Hospital, Department of Medical
RL Sciences; 6-3-22 Higashi Oh-i, Shinagawa, Tokyo 140-8522, Japan
XX
RN [2]
RX DOI; 10.1007/s007050050689.
RX PUBMED; 10881684.
RA Takahashi K., Iwasa Y., Hijikata M., Mishiro S.;
RT "Identification of a new human DNA virus (TTV-like mini virus, TLMV)
RT intermediately related to TT virus and chicken anemia virus";
RL Arch. Virol. 145(5):979-993(2000).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2856
FT /organism="Torque teno mini virus 1"
FT /host="Homo sapiens"
FT /isolate="TLMV-CBD279"
FT /mol_type="genomic DNA"
FT /note="isolated from human serum"
FT /note="originally submitted as 'TTV-like mini virus'"
FT /db_xref="taxon:687369"
FT TATA_signal 163. .166
FT TATA_signal 165. .168
FT TATA_signal 335. .338
FT CDS 356. .631
FT /codon_start=1
FT /note="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:Q9QU31"
FT /protein_id="BAA86950.1"
FT /translation="MSSFLTPAVYSKNGLENQWINTIWNTHDLMCGCNNAIKHLFDILK
FT KKGEQLCLPSTTEDAGTQTHGEEKDYDLEEGDLDALFANDFEEDDG"
FT CDS 508. .2496
FT /number=1
FT /note="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:Q9QU30"
FT /protein_id="BAA86951.1"
FT /translation="MPPFYYRRRWYSNPWRRKRLRFRRRRLRRPIRKRFRRRRWVRRRR
FT FFRFKRKLRKIRIDQWQPETIRKCHVKGNLCLLTCGRGNINHNYILTSESYVPTSEPGG
FT GSWSILQMTTRVLYDEYKAARNWWTKSNSLLPLTKYIRCKLKFYRSDQTDYIVTIQRTG
FT PFEVTLESYLSTQPSRHLMNHKAFIVPKLGRGPNKETYVKKIVRPPALFQSKWYFSQDI
FT YNTPLFILTVSSCSLDQMYAPQDQISTNISLFSLNTNVFQINNWHKQPYTTKAASTLET
FT YLYCYHNGHEPTQELKWKDIILLGNMTNYTDGKKYNTSGTTPLDLFKTENKPYWGNVFT
FT NLNQDQDVIIYYGTKPKQDDNWTSTAPILPITSLYVECRYNPFKDKGTGNKVYLVPTDS
FT GLGSFLTLPTKSELIITDLPLWLITWGWIEWLKKSRPVAHIEEEYQVVIQSKYIHPQLP
FT CYVLIDKYFRHPPEGQHYITELSETDKLHWHPKYSMQTEQLELIAETGPAAPKINNTKQ
FT IEAHLNYDFLFKWGGSPAPMETITDPAEQEKFPSPSNQLQGLQIESPGKPKQYYLYTFD
FT EKRSELTMPAAKRLKKDFTTPTFFTDFGTKDIPLKTQEETDQISEDEEIETSLPKEDHL
FT KQQLQRTRQYYREGIRKLLKTKKLFPL"
FT CDS 2078. .2470
FT /codon_start=1
FT /note="ORF3"
FT /db_xref="InterPro:IPR008474"
FT /db_xref="UniProtKB/TrEMBL:Q9QU29"
FT /protein_id="BAA86952.1"
FT /translation="MTFYSSGEEAQHQWKQLQTQQNKKNSPRPVTSSRDFRSRVQGNQS
FT NTIFTHLTKSAANSQCQLQKDLKKTLQLQHFLQTLEQKTSPSKHKRKRTKYRRTKKSKH
FT HSRKKTTSSSSSSERDSTTGRESESS"
FT polyA_signal 2740. .2745
FT repeat_region 2776. .2806
FT /gene="DR1"
FT /note="direct repeat"
FT repeat_region 2803. .2833
FT /gene="DR2"
FT /note="direct repeat"
FT repeat_region 2830. .2856
FT /gene="DR3"
FT /note="direct repeat"
XX
SQ Sequence 2856 BP; 1146 A; 630 C; 460 G; 620 T; 0 other;
ab026931 Length: 2856 02-NOV-2009 Type: N Check: 5712 ..
1 taattaatat tcaacaggaa aaccacataa tttgaattgc cgaccacaaa
51 ctgacaactg ttgctgcaac ttctgctttt acaactacac ttctcctttt
101 ttagagccac acctactaat tcattaatag tcagacgcta ttcctgggag
151 gagcaacaca tctatataac caagtacaca gacgaatggc tgagtttatc
201 acgccagacg gagacggcat cagaagactg actgccggct gatcttgggc
251 gggagccgaa ggtgagtgaa accaccgaag tctaggggca attcgggcta
301 gatcagtctg gcggaacggg caagaaactt aaaatataac atttatttta
351 cagatatgag ctcttttcta acaccagctg tatactccaa aaatggctta
401 gaaaaccaat ggattaacac aatttggaac acccacgact taatgtgcgg
451 atgcaacaac gccattaaac atctttttga catcctgaaa aaaaaaggtg
501 aacaactatg cctcccttct actacagaag acgctggtac tcaaacccat
551 ggagaagaaa aagactacga tttagaagaa ggagacttag acgccctatt
601 cgcaaacgat ttcgaagaag acgatgggta agaagacgtc gcttttttag
651 atttaaaaga aaacttagaa aaataagaat agaccaatgg caaccagaaa
701 ctattagaaa atgccatgta aaaggaaact tatgcttact aacttgcggt
751 agaggaaata ttaaccataa ctacatacta acatcagaaa gttatgtacc
801 tacatcagaa ccgggagggg gatcatggtc aattttacaa atgacaacaa
851 gagtactgta tgacgaatac aaagcagcca gaaactggtg gacaaaatct
901 aactccttac taccactaac aaaatatatt agatgtaaac taaaatttta
951 tagaagtgac caaacagact acatagtaac tatacaaaga acaggcccat
1001 ttgaagttac actagaatca tacttaagca cacaacctag tagacaccta
1051 atgaaccaca aagcatttat agtaccaaaa ctaggaagag gaccaaacaa
1101 agaaacatat gtaaaaaaaa ttgttagacc accagcacta tttcaaagta
1151 aatggtactt ttcacaagac atatacaata caccactatt tatattaaca
1201 gtatcatcct gctcactaga ccaaatgtat gccccacaag accaaataag
1251 tactaatata tcattatttt cattaaacac aaatgttttc caaataaata
1301 actggcacaa acaaccatac accacaaaag cagcaagcac cttagaaaca
1351 tacctatact gctaccacaa tggacatgaa ccaacacaag aattaaaatg
1401 gaaagacata atattactag gaaacatgac aaactacaca gacggtaaaa
1451 agtacaatac atcaggaaca accccattag acctttttaa aacagaaaac
1501 aaaccatatt ggggtaacgt atttacaaac ttaaaccaag atcaagatgt
1551 aataatatac tacggtacta aaccaaaaca agacgacaat tggacctcaa
1601 cagcacctat tttacctata acaagtttat atgtagaatg cagatacaac
1651 ccatttaaag acaaaggcac aggaaacaaa gtatatttag ttccaacaga
1701 ctcaggatta ggatccttct taacattacc aacaaaaagt gaactaataa
1751 taacagacct accattatgg ttaataacat ggggatggat agaatggtta
1801 aaaaaaagca gaccagtagc acatattgaa gaagaatacc aagttgttat
1851 acaaagcaaa tacatacacc cacaattacc atgttatgta cttatagaca
1901 aatactttag acacccacca gaaggacaac attatataac agaactatca
1951 gaaacagaca aactacactg gcacccaaaa tactcaatgc aaacagaaca
2001 actagaacta atagcagaaa caggaccagc ggcaccaaaa attaacaaca
2051 caaaacaaat agaagcacac cttaattatg actttttatt caagtgggga
2101 ggaagcccag caccaatgga aacaattaca gacccagcag aacaagaaaa
2151 attcccctcg cccagtaacc agctccaggg acttcagatc gagagtccag
2201 ggaaaccaaa gcaatactat ctttacacat ttgacgaaaa gcgcagcgaa
2251 ctcacaatgc cagctgcaaa aagacttaaa aaagacttta caactccaac
2301 attttttaca gactttggaa caaaagacat ccccctcaaa acacaagagg
2351 aaacggacca aatatcggag gacgaagaaa tcgaaacatc actcccgaaa
2401 gaagaccacc tcaagcagca gctccagcga acgagacagt actacaggga
2451 gggaatcaga aagctcctaa aaacaaaaaa attattcccc ctgtaagaga
2501 catgtttggt aaaccataca aattaaatcg tagatttact agtaaagaat
2551 ttgaacaaga gttagaggac gctagaattt ggaaaagacg ccctagatat
2601 tatataaatg atatgcctga ctataaactt gatgtactag aacctcttgt
2651 aaacttcaat gtaaactttt cattaaacta caaattctaa gccagcaaat
2701 attcacttgt cggtgtcagt ttatataagt aaaaacttta ataaacatcc
2751 actacctccc aaatacgcag gcgcaaaggg ggctccgccc ccttacaccc
2801 ccaagggggc tccgccccct tacaccccca agggggctcc gcccccttac
2851 accccc