Sequence of DPV Japanese yam mosaic virus

Japanese yam mosaic virus gene for coat protein, partial cds, strain:J1B.

ACC No: AB027008

Dated: 2003-07-07 | Length: 873 | CRC: -43744276

                !!NA_SEQUENCE 1.0
ID   AB027008   standard; RNA; VRL; 873 BP.
XX
AC   AB027008;
XX
SV   AB027008.1
XX
DT   09-NOV-1999 (Rel. 61, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Japanese yam mosaic virus gene for coat protein, partial cds, strain:J1B.
XX
KW   Coat protein.
XX
OS   Japanese yam mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-873
RA   Fuji S., Nakamae H.;
RT   ;
RL   Submitted (07-MAY-1999) to the EMBL/GenBank/DDBJ databases.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Science; Shimoshinjo, Akita, Akita 010-0146, Japan
RL   (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Iida T., Nakamae H.;
RT   "Selection of an attenuated strain of Japanese yam mosaic virus and its use
RT   for protecting yam plants against severe strains";
RL   Nippon Shokubutsu Byori Gakkaiho 0:0-0(2000).
XX
DR   GOA; Q9QN07.
DR   SPTREMBL; Q9QN07; Q9QN07.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .873
FT                   /db_xref="taxon:79917"
FT                   /mol_type="genomic RNA"
FT                   /organism="Japanese yam mosaic virus"
FT                   /strain="J1B"
FT   CDS             <1. .873
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9QN07"
FT                   /db_xref="SPTREMBL:Q9QN07"
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /protein_id="BAA86289.1"
FT                   /translation="SGDDTLDAGTNVPSKTKKQEGAKTSQGETSTAEGFEPADDPTGRG
FT                   KQQTVITLEKDVNVGTMGTFAVPRLKGLATKMNMPRVRGKAAMNLDHLLLYNPEQVDLA
FT                   NTRATRKQFDTWYDGVKRDYELDDSSMQIILNGLMVWCIENGTSPNINGMWVMMDGEEQ
FT                   IEYPIKPLIDHAKPTFRQIMTHFSNVAEAYIEKRNQERAYMPRYGLQRNLTDMSLARYA
FT                   FDFCEVTSKPPARAREAHIQMKAAALRGVQNKLFGLDGNVSTMEENTERHTAEDVNRNM
FT                   HSLLGVRGV"
XX
SQ   Sequence 873 BP; 311 A; 167 C; 211 G; 184 T; 0 other;

  AB027008  Length: 873  July 15, 2003 09:01  Type: N  Check: 1825  ..

       1  agtggtgacg acacattgga cgctgggaca aatgttccaa gtaaaacaaa
      51  gaaacaggaa ggggcgaaga cttctcaagg tgaaacatca acagcagaag
     101  gttttgaacc agctgatgat ccaacaggca gaggaaaaca acaaacagtc
     151  attactctag aaaaggatgt caatgttggc acaatgggca cttttgcagt
     201  accacgattg aaaggacttg ctacaaaaat gaacatgcct cgagttaggg
     251  gaaaagcagc tatgaatttg gatcatttgt tgctctataa cccagagcaa
     301  gttgatcttg ccaacacaag ggctacaaga aaacaatttg acacgtggta
     351  tgatggagtt aagagagact atgaactgga tgacagttca atgcaaataa
     401  tcctaaatgg attaatggtg tggtgtattg agaatggcac ttcaccaaac
     451  ataaatggaa tgtgggttat gatggatgga gaggagcaaa ttgaatatcc
     501  aataaaacca ttgatagatc acgccaaacc cacatttcgc cagataatga
     551  ctcatttcag taatgtcgct gaagcataca ttgaaaagag aaaccaagag
     601  agagcgtaca tgccacgcta cggacttcag aggaacctga cagacatgag
     651  tctcgctcgc tacgcatttg atttttgcga agtaacatca aaaccaccag
     701  caagagcacg cgaggctcac atccaaatga aggcagcagc ccttagaggt
     751  gtgcaaaaca aattatttgg attggacgga aatgtcagca caatggaaga
     801  aaacacggag agacacacag ctgaagatgt taaccgcaat atgcacagcc
     851  ttctcggcgt gaggggtgtg taa