Sequence of DPV Hantaan virus

Hantaan virus S segment gene for nucleocapsid protein, complete cds, strain:Q32.

ACC No: AB027097

Dated: 2003-07-07 | Length: 1635 | CRC: 454396921

                !!NA_SEQUENCE 1.0
ID   AB027097   standard; genomic RNA; VRL; 1635 BP.
XX
AC   AB027097;
XX
SV   AB027097.1
XX
DT   15-NOV-1999 (Rel. 61, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 4)
XX
DE   Hantaan virus S segment gene for nucleocapsid protein, complete cds,
DE   strain:Q32.
XX
KW   nucleocapsid protein.
XX
OS   Hantaan virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Hantavirus.
XX
RN   [1]
RP   1-1635
RA   Yoshimatsu K., Wang H.;
RT   ;
RL   Submitted (11-MAY-1999) to the EMBL/GenBank/DDBJ databases.
RL   Kumiko Yoshimatsu, Hokkaido University School of Medicine, Institute for
RL   Animal Experimentation; Kita-ku, Kita-15, Nishi-7, Sapporo, Hokkaido
RL   060-8638, Japan (E-mail:yosimatu@med.hokudai.ac.jp, Tel:81-11-706-6906,
RL   Fax:81-11-706-7879)
XX
RN   [2]
RX   MEDLINE; 20569517.
RX   PUBMED; 11118357.
RA   Wang H., Yoshimatsu K., Ebihara H., Ogino M., Araki K., Kariwa H., Wang Z.,
RA   Luo Z., Li D., Hang C., Arikawa J.;
RT   "Genetic diversity of hantaviruses isolated in china and characterization
RT   of novel hantaviruses isolated from Niviventer confucianus and Rattus
RT   rattus.";
RL   Virology 278(2):332-345(2000).
XX
DR   GOA; Q9QMW2.
DR   SPTREMBL; Q9QMW2; Q9QMW2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1635
FT                   /db_xref="taxon:11599"
FT                   /mol_type="genomic RNA"
FT                   /organism="Hantaan virus"
FT                   /isolate="Chinese isolates"
FT                   /strain="Q32"
FT                   /segment="S"
FT   CDS             1. .1290
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9QMW2"
FT                   /db_xref="SPTREMBL:Q9QMW2"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="BAA86832.1"
FT                   /translation="MATMEELQREINAHEGQLVIARLKVRDAEKPYEKDPDELNMRTLT
FT                   DREGVAASIQAKIDELKRQLADRIATGKNLGKEQDPTGVEPGDHLKERSMLSYGNVLDL
FT                   NHLDIDEPTGQTADWLSIVIYLTSFVVPILLKALYMLTTRGRQTTKDNKGTRIRFKDDS
FT                   SFEDVNGIRKPKHLYVSLPNAQSSMKAEEITPGRYRTAICGLYPAQIKARQMISPVMSV
FT                   IGFLALAKDWSDRIEQWLSEPCKLLPDTAAVSLHGGPATNRDYLRQRQVALGNMETKES
FT                   KAIRQHAESAGCSMVEDIESPSSIWVFAGAPDRCPPTCLFIAGIAELGAFFSILQDMRN
FT                   TIMASKTVGTSEEKLRKKSSFYQSYLRRTQSMGIQLDQRIIVLFMVAWGKEAVDNFQPG
FT                   DDMDPELRTLAQSLIDVKVKEISNQEPLKL"
XX
SQ   Sequence 1635 BP; 513 A; 325 C; 378 G; 419 T; 0 other;

AB027097  Length: 1635  January 8, 2004 16:01  Type: N  Check: 8948  ..

       1  atggcaacta tggaggaatt gcagagggaa atcaatgccc atgagggcca
      51  actggtgata gccaggctca aggtgaggga tgcagaaaaa ccctatgaga
     101  aggatccaga tgaactgaac atgagaacat taactgacag ggaaggggtt
     151  gcagcatcaa tccaggccaa gattgatgaa ctgaaaaggc agctagcgga
     201  taggattgca actggaaaaa accttggaaa ggaacaggat cccactggag
     251  tagaacctgg agaccatcta aaagagagat caatgctcag ttatggaaat
     301  gtattggact tgaaccatct ggatattgat gagcctactg ggcagactgc
     351  agactggctt agtattgtta tatatctgac atcttttgtt gtcccgatac
     401  ttctgaaggc cttatatatg ctcacaacaa gaggaaggca gacaaccaaa
     451  gataacaaag ggaccaggat tcgattcaag gatgacagct cttttgagga
     501  tgttaacggg attcgaaagc caaagcatct atatgtgtcc ttgcccaatg
     551  cccaatcaag catgaaggca gaagagatca caccaggtag gtacagaaca
     601  gcaatctgtg gactttatcc tgcacagatc aaagccagac aaatgattag
     651  ccctgtcatg agtgtaattg gatttttggc gctggcaaaa gattggagtg
     701  accgtattga acagtggtta agtgaacctt gtaagctact cccggacaca
     751  gcagcagtaa gccttcatgg aggccctgca acaaacaggg attacctacg
     801  gcagcgccag gtggcactgg gtaatatgga aacaaaagaa tcaaaggcca
     851  tacgtcaaca tgctgaatct gcaggttgca gcatggttga ggatattgag
     901  tcaccatcat cgatatgggt ttttgccgga gcaccagatc gctgtccacc
     951  gacatgcctg tttattgcag ggattgctga acttggcgca ttcttctcca
    1001  ttttacagga catgcgaaac acaattatgg cctcaaagac agtgggaaca
    1051  tctgaggaaa agctacggaa gaaatcatca ttctatcagt cttatctcag
    1101  gcgaacccaa tcaatgggaa tacaactgga ccaaagaatc atagtgctct
    1151  ttatggttgc ctggggtaaa gaggctgtgg ataacttcca gccaggggac
    1201  gatatggacc ctgaattaag gacactagca caaagcctga ttgatgttaa
    1251  agtgaaggaa atttctaacc aagaaccatt aaagctataa ttaatgaatg
    1301  tataatctta ttatgtgatc attatatact actgaatcat tatcaatcat
    1351  atttacacta ttataatcag gggaatcatt atatcagggt aggggtacat
    1401  ttatgggtgg gaatcattat tcaaagggtg ggtcagttaa tctactgtgg
    1451  gtgggtttag ttccaggctg ccttaagtag cctttttttg tatatatgga
    1501  tgtaaatttc atttggtcat atactaatca agccttcttt tcttttcttc
    1551  ctgccttttc tgcttactaa caacaacaac ctacctcaac acaaaactat
    1601  ctcaacctaa ctacctcatt tgcttgctcc cttga