Sequence of DPV Yam mild mosaic virus

Yam mild mosaic virus gene for NIb/CP, partial cds.

ACC No: AB029405

Dated: 2003-07-07 | Length: 1353 | CRC: -502655313

                !!NA_SEQUENCE 1.0
ID   AB029405   standard; RNA; VRL; 1353 BP.
XX
AC   AB029405;
XX
SV   AB029405.1
XX
DT   06-JUL-2000 (Rel. 64, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Yam mild mosaic virus gene for NIb/CP, partial cds.
XX
KW   NIb/CP.
XX
OS   Yam mild mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1353
RA   Fuji S., Mitobe I., Nakamae H., Natsuaki K.T.;
RT   ;
RL   Submitted (24-JUN-1999) to the EMBL/GenBank/DDBJ databases.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Science; Shimoshinjo, Akita, Akita 010-0146, Japan
RL   (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Mitobe I., Nakamae H., Natsuaki K.T.;
RT   "Nucleotide sequence of coat protein gene of Japanese yam mosaic virus and
RT   yam mild mosaic virus, isolated from Dioscorea alata in Japan";
RL   Unpublished.
XX
DR   GOA; Q9IR49.
DR   SPTREMBL; Q9IR49; Q9IR49.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1353
FT                   /db_xref="taxon:87097"
FT                   /mol_type="genomic RNA"
FT                   /organism="Yam mild mosaic virus"
FT                   /strain="Jpn"
FT   CDS             <1. .1209
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9IR49"
FT                   /db_xref="SPTREMBL:Q9IR49"
FT                   /transl_table=1
FT                   /product="NIb/CP"
FT                   /protein_id="BAA97661.1"
FT                   /translation="GNRHKRKEDIWFMSHKAIKREGIFIPKLEEERIVAILEWSRTENY
FT                   EHRLEAICAAMIEAWGYDELLRQIRLFYSWVLEQEPYRTLASEGRAPYISEYALRRLYL
FT                   GDDDDDAELYNRYLRALIDNYTHDDSDVVVHQASKEQTFDAGQFAGKQAQPQGSASNPE
FT                   GPGKDVNVGTKGTFSIPRIKAPMSKLTLPKLKGKILVNLEHLVEYEPEQVDISNKRASQ
FT                   EQLGQWVEAVKTSYDVDDEHLKIILNGFMVWCIENGTSPNINGNCYMIENGEQIEFPLK
FT                   PIVENAKPTLRQIMAHFSDLAEAYIEKRNAKKAYMPGYGLKRNLNDYSLARYAFDFFEI
FT                   TSKTPVRAREAHMQMKAAALRNTRTRLFGLDGSFGTNDENTERHTSDDVNRDMHSLLGV
FT                   RNI"
XX
SQ   Sequence 1353 BP; 452 A; 245 C; 312 G; 344 T; 0 other;

 AB029405  Length: 1353  July 15, 2003 09:04  Type: N  Check: 8332  ..

       1  ggaaataggc ataagcgtaa ggaagatatt tggttcatgt cacataaagc
      51  aatcaagagg gagggcattt tcattccaaa acttgaagag gaacgaattg
     101  ttgcaatact tgaatggagc agaacggaga actatgaaca tagactcgaa
     151  gctatttgcg cagcaatgat tgaagcatgg ggatatgatg agctgttaag
     201  acaaatacgt ttgttttaca gctgggtttt ggagcaggaa ccatatagaa
     251  ccctggcatc tgaaggtcgt gcaccataca tctctgaata cgctcttcga
     301  aggttatact taggggatga tgacgatgac gcggaattgt acaacaggta
     351  tctgagagca cttatagaca actacactca cgatgattct gatgttgtcg
     401  ttcaccaagc aagcaaagaa caaacatttg acgccggaca atttgcaggc
     451  aaacaggcac aaccacaagg gtcagcaagt aatcctgaag gaccaggaaa
     501  agatgttaat gttggaacga aaggaacatt cagtatccct cgcatcaaag
     551  caccaatgag caaattgaca ctacctaaac ttaaaggaaa aattttggtg
     601  aatttagaac atctagttga gtatgaaccg gagcaggttg acatctcaaa
     651  caaacgagca tctcaggaac aactcggcca gtgggtggaa gcagtcaaaa
     701  cttcatacga tgtggatgat gagcatttga agattatttt gaatggattt
     751  atggtctggt gcatcgagaa cggaacttca ccaaacatca acggaaattg
     801  ctacatgatt gagaatgggg aacagataga atttccattg aaaccaattg
     851  ttgaaaatgc aaagccaaca cttcgacaga tcatggcgca ctttagtgat
     901  ttagctgaag cttacattga aaaacgcaat gcgaagaaag catacatgcc
     951  aggttatgga ttaaagcgga acctcaacga ttattcactg gcacgctatg
    1001  cttttgattt ctttgagatt acgtcaaaaa ctccagtgcg tgcacgagag
    1051  gcacacatgc agatgaaagc agcagcttta cggaacactc gaactcgtct
    1101  ttttggtttg gatggttctt ttggtacgaa tgacgaaaac acggagagac
    1151  acacaagcga tgatgtgaac agagacatgc actctcttct tggagtgcgt
    1201  aatatctaaa tatttatata agtaaatatt cagtaagctt atataattat
    1251  tgcatagtat tttagtgtgg ttcgtccacc ataaataagt actatgttcg
    1301  ccctactgat ggttcagtgt ggttatgcca tcaatgactt tcaataggga
    1351  gag