Sequence of DPV Satsuma dwarf virus
Natsudaidai dwarf virus PP2 gene for polyprotein, partial cds.
ACC No: AB032750
Dated: 2003-07-07 | Length: 4629 | CRC: -1422341517
!!NA_SEQUENCE 1.0
ID AB032750 standard; RNA; VRL; 4629 BP.
XX
AC AB032750;
XX
SV AB032750.1
XX
DT 28-MAR-2000 (Rel. 63, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE Natsudaidai dwarf virus PP2 gene for polyprotein, partial cds.
XX
KW polyprotein.
XX
OS CiMV strain ND-1
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Sequiviridae;
OC SDV-like viruses; Citrus mosaic virus.
XX
RN [1]
RP 1-4629
RA Iwanami T.;
RT ;
RL Submitted (24-SEP-1999) to the EMBL/GenBank/DDBJ databases.
RL Toru Iwanami, National Institute of Fruit Tree Science, Department of Plant
RL Protection; Fujimoto 2-1, Tsukuba 305-8605, Japan
RL (E-mail:tiwsw37@fruit.affrc.go.jp, Tel:81-298-38-6546, Fax:81-298-38-6546)
XX
RN [2]
RA Iwanami T., Kondo Y., Kobayashi M., Han S.S., Karasev A.V.;
RT "Sequence diversity and interrelationships among isolates of satsuma
RT dwarf-related viruses";
RL Arch. Virol. 146:807-813(2001).
XX
DR GOA; Q9JGK7.
DR SPTREMBL; Q9JGK7; Q9JGK7.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4629
FT /db_xref="taxon:104661"
FT /mol_type="genomic RNA"
FT /organism="CiMV strain ND-1"
FT /isolate="ND-1"
FT CDS <1. .4332
FT /codon_start=1
FT /db_xref="GOA:Q9JGK7"
FT /db_xref="SPTREMBL:Q9JGK7"
FT /note="polyprotein including coat proteins"
FT /transl_table=1
FT /gene="PP2"
FT /product="polyprotein"
FT /protein_id="BAA92934.1"
FT /translation="KVSTRGLTWKSVRAAQKAARKAAKYFGFSVSENPFSCLPSEGRSV
FT AAGETPASLSVVLPQIDWAARKAASRKVPTVGTEDAPFLGLLPESPRLRDEGLLSLLRA
FT KIATLVASRDRQVPVPRRVVKTQKKNSQCEFFTEEVRTTKCVINGKMGIPRNPIIQRLL
FT PTRLIQRKRVVAKFEPQIVSSSRHKFDMSHIYDERRWVIYPSIIKIELKDAYQTAQNLG
FT ILSDSASALERVRALSSHHLDLEREVRALEQEHYPAPRKTVAARIFSFFMEEYALAHEE
FT AKERIRRQKEDKRREHLSFLRHLRRQAFELLAAERAAYLKKISEAREIAIALKERAEKG
FT PPPQLLYIPEWHVVQHAKAHMEGTSYDRTLREHMCHRYDQKLAAFQNGSLSESSKFAAA
FT CGAHFERIFGYAVHRSARTETVTQVAESSPPPVITAPVGRMVGGNPPTETPGTAAVRAA
FT MQRAVERNRPGPRESSAMPAREPLLSHRGQYYARSLSDRYNNIFSRNNAYNLMRETDVP
FT IMEFTFGQQQDIAIPLSSRFGNHPSLHIGELEIAVQSAVLSGVDTAMAIMVSDASHDRL
FT EEGFLSLTILRLGAGWMRHTIPIGITVFPTDPLVDRLLRLSVLTGGSPMADGRQVARLH
FT YGLLGQAYTGAGEQRLTQYATRRINVRQTHVTQFLEGNHIHIARSEDRQQPLPHMNLEY
FT RPLSGSTRYVARPGGYQAVESGRQNIDITQNFIAMPTHLTRSATHRDTDVSEPANPNIK
FT QGRANQPDNNEVPVSEEEPTGERRLPGGSAVHRGFTEFSERNENKIEHFYVPSMHGLSL
FT KEDIHLFTKNLEIPSTADFCKELARYKVMAEAMNYRSASYYSRLLSGVAILRPHFKFVC
FT RLVTPILESIPLMIVWDDLSQLTTKVSRLSSAFEIIDSDHTKAAIYEVRPSGPTDLLTP
FT SKSHYGMGGDLVIFSGGYGSSALSSPLRLKIEASLLKDSQVGSGEVGVPQGPSSMLSFY
FT YLNEVDIGDINLYSFLGSCKYDSKSVVNSRKYISICPAAGLVHSKGKAAYLGLTASLFS
FT MYNFWKGSYILKVDVLSKGSCAGAISIYVPPPGTSADHYSQSQLDTLPRYELPWRGTGS
FT ARFEVENFSWIGWHLTKPQRFVTNEDWFSLNAGVVVVLNQPPTTRAGGSSDIRVIFRIV
FT KFKNLTLKERSTTCDIFTGIKDATYTSPLYDVLDNSISVPASVASDPDIELDATSSIQA
FT SNVLPRSFGAYYAYLLGGAVSGKRWHSYVLPITMGHHRSEIGTTKTGYLNEKLDDTVRV
FT RYSVRNPLHILCAAGAYYATDLLFTLVIDGDFASERAFAQLGLIQTPLMEYYDGYSTDR
FT TLSSEGGHSNQLGVGKSYIQLLVPRRNYRARSITTETATLFFETIGSLSIRFTVSDKIK
FT GVHLFVEAAGPIDVDGYGRGFDIGFTEESYVLMPSLRTAAQ"
XX
SQ Sequence 4629 BP; 1198 A; 1034 C; 1091 G; 1306 T; 0 other;
AB032750 Length: 4629 July 15, 2003 09:01 Type: N Check: 4264 ..
1 aaggtctcta ctcgaggcct tacatggaaa tctgtgcgtg ctgcacagaa
51 ggctgctagg aaagcagcta aatattttgg gttttctgtt tcagaaaatc
101 ctttctcctg cctcccgtct gaagggagat cagttgctgc aggtgaaact
151 cctgcttctc tctctgtggt tttaccacag attgattggg ccgcccgtaa
201 ggcggcctct cgtaaggtgc ctactgtggg cactgaggat gcaccctttt
251 tagggttgct cccggagtct ccccgcctcc gtgatgaggg gttgctctct
301 ttgctgagag ccaagatcgc cactcttgtg gcgagcaggg accgtcaggt
351 ccctgtacca aggagggtcg tcaagaccca gaagaagaac tcacaatgtg
401 agttctttac cgaggaggtg cgcactacaa agtgcgttat taacggtaaa
451 atgggtattc cacggaatcc cataattcaa cgccttctcc ccacccgctt
501 aatccaaagg aagcgagttg tggccaaatt tgagccacag atagtgagct
551 cctcgagaca taagtttgat atgtctcata tttatgatga acgaaggtgg
601 gttatttacc catctattat caaaattgag ctcaaggatg cctaccaaac
651 tgcacaaaat ttgggcatcc tttcggacag tgcttccgct cttgagcgtg
701 tgcgagccct ttcctctcac catctagacc tagagaggga ggtgcgcgcg
751 ctcgaacaag agcattatcc ggccccaaga aaaactgttg ctgctagaat
801 tttttccttc tttatggagg aatatgctct ggctcatgaa gaggccaagg
851 aacgcattag gcgacaaaaa gaagataagc ggagggagca tctctccttt
901 ctgcgacact tgagacgcca agcgttcgag cttttagctg ccgagcgagc
951 cgcttatttg aagaaaattt ctgaggctcg tgaaatagcc attgccctca
1001 aagaaagggc tgaaaaagga ccgccaccac aattattata cattcctgaa
1051 tggcacgttg ttcaacatgc aaaagcgcat atggagggta cttcatatga
1101 tcgcacgctt agagagcata tgtgccaccg ttatgatcag aagctagcag
1151 catttcagaa tggttctctc tctgagagtt ccaaatttgc tgctgcctgt
1201 ggggcgcatt ttgagcggat tttcggatat gctgtgcata gaagtgcacg
1251 aaccgaaacg gtgactcagg ttgctgagtc ttctccacca ccagtaatca
1301 ccgcacctgt agggcgaatg gttggaggaa atccacctac agaaacacca
1351 ggaacagctg ccgttagagc agctatgcag cgagcagttg aacgcaatag
1401 acctggcccc cgcgaatctt ctgcaatgcc ggccagagaa cccctacttt
1451 cacatagggg gcagtattac gctcgctcac tttcagatag atataacaat
1501 atcttctctc gcaataatgc atacaatctc atgcgagaaa ctgatgtgcc
1551 cattatggaa tttactttcg ggcaacagca ggatattgct atacctctgt
1601 cctcgcgatt tggaaaccat ccgtctctcc acattggtga attggaaatc
1651 gctgttcagt cagcggttct ttctggagtg gatacagcaa tggcaattat
1701 ggtctcagat gcttctcatg atagactcga agaaggtttc ttgagtctaa
1751 ccattttgag actaggtgct ggatggatgc gccacacgat ccctattgga
1801 attactgttt ttccaacgga tcctctagtt gatcgtcttt taagattatc
1851 agtattgact ggaggttctc caatggcaga cggtagacaa gtggccaggc
1901 tccattatgg tttgcttggc caggcttata ctggcgctgg cgagcagagg
1951 ttaactcagt atgccactcg aaggattaac gtgcgtcaaa cgcacgtaac
2001 tcaattcctt gagggcaacc atatacatat tgctcgctct gaggatagac
2051 agcagccgtt accccatatg aatttggagt atcggccact atctggaagt
2101 actaggtatg tggcacgacc tggtggatat caagctgtgg aaagtggtag
2151 gcagaacatt gatataacgc aaaatttcat agcaatgcct acgcacttaa
2201 caagaagtgc cacgcaccga gatactgatg tctcggaacc cgcaaatcca
2251 aacattaagc agggacgggc gaatcaacct gataataatg aagtccctgt
2301 ctcagaagaa gaaccaaccg gcgaacggcg cctccctgga ggttcagctg
2351 ttcacagagg atttacggaa ttctctgaga ggaacgaaaa taaaatagaa
2401 catttttacg ttccttctat gcatggactg tcactcaagg aagatattca
2451 tttatttacc aagaatcttg agataccttc tacagctgat ttctgtaagg
2501 aattggccag gtataaggtt atggcagaag ccatgaatta taggagcgcc
2551 agctattatt ctcgtctact gtccggggtt gcaattttgc gacctcattt
2601 caaatttgtg tgtaggctgg ttactcctat tctagaatct atacctctta
2651 tgatagtctg ggacgattta tcacaattaa caacaaaagt ctcccgatta
2701 tcatcagcct ttgaaattat tgattcagat cataccaagg ctgcaatata
2751 tgaggttcga ccatcagggc ccacggactt attgactccc tctaaaagcc
2801 attatggaat ggggggggat ctcgttatct tctctggtgg ttatggttct
2851 tctgcccttt cctcgccttt gagacttaag attgaggcga gtcttctcaa
2901 agactcgcaa gtaggttctg gcgaggttgg ggtgccccaa ggaccctctt
2951 ctatgttgtc attttattat cttaatgagg tggatattgg ggatataaat
3001 ttgtattctt ttctaggtag ttgtaaatac gattctaagt cagttgtaaa
3051 tagtagaaaa tatatttcta tttgtccagc agccggcctt gttcatagta
3101 aaggtaaggc cgcttattta ggtttaacag cttccctttt ttccatgtat
3151 aatttttgga agggaagtta tattttgaaa gtggatgttc tttcaaaagg
3201 gagttgtgct ggagcaatta gtatatatgt gcctcctcca ggtacaagtg
3251 ctgatcacta ctcccaatcg cagttggaca ccctcccacg atatgaatta
3301 ccttggaggg gaacgggatc tgccagattt gaggttgaaa atttttcctg
3351 gattggttgg catttgacca aacctcagcg tttcgtaacc aacgaagatt
3401 ggttttcatt gaatgctggg gtggtcgtgg tgctcaatca gccaccaaca
3451 acaagagctg gcggatcaag cgatataaga gtgatctttc gtattgtcaa
3501 attcaaaaac ctcactctta aagaacgatc cacgacctgt gatatattca
3551 caggtataaa ggatgcaact tatacttcac ctctgtacga tgtactggat
3601 aattccattt cagtaccagc ctcagttgca tccgacccgg acattgagct
3651 tgatgctacc tccagcattc aagcgagcaa tgtgctcccg agatcatttg
3701 gcgcatacta tgcgtattta ttgggtggag cagtgtccgg aaaaaggtgg
3751 cactcttatg tgctacccat aacgatggga catcatagga gtgaaatcgg
3801 cacgacaaag actgggtatc taaatgagaa acttgatgat acagtcagag
3851 tcaggtactc cgtgcgcaac ccattacata tcctgtgcgc cgcgggtgct
3901 tattatgcca ccgacctcct tttcactctc gtaattgatg gagattttgc
3951 atccgaacga gccttcgctc aacttggact catccaaact cctttaatgg
4001 agtattacga tgggtattcc actgatcgga ctctctcatc tgagggagga
4051 cactctaacc agttgggtgt gggcaagtca tatatccaat tacttgtccc
4101 aaggaggaat tatagggcta gatccattac cacggaaacc gcaaccttgt
4151 tctttgaaac gattggatcc ctttcaattc gattcactgt cagtgataag
4201 atcaagggag tccatttatt tgtggaggct gcgggcccta ttgatgttga
4251 tggttacggg agagggtttg acatcggatt cactgaggaa tcctatgttt
4301 taatgccctc tctccgtaca gccgctcagt agcggcatta ggtaatgcct
4351 gctggacctt aacgcaggat tgatcatatt gaggaattgg gaaagaattt
4401 ctagagttct ttttccttct ctatgtaggt gctgcccacc ggaccttgac
4451 gtgggttaat atgtaaatac tagtgtgtat tttctattta tttgttttgt
4501 ttgtttttct taaaataaac tggatttcaa aaagggtttc tcgagttctt
4551 ccctttccga tccaggaact ccgcgtgttt ttcttgattt ctgtcgcgtg
4601 cggttacgac cagtgaaagt ctggtgacc