Sequence of DPV Satsuma dwarf virus
Citrus mosaic sadwavirus PP2 gene for polyprotein, partial cds, isolate:LB-1.
ACC No: AB032751
Dated: 2006-04-04 | Length: 2981 | CRC: -895622039
ID AB032751 standard; genomic RNA; VRL; 2981 BP.
XX
AC AB032751;
XX
SV AB032751.1
XX
DT 28-MAR-2000 (Rel. 63, Created)
DT 04-APR-2006 (Rel. 87, Last updated, Version 4)
XX
DE Citrus mosaic sadwavirus PP2 gene for polyprotein, partial cds,
DE isolate:LB-1.
XX
KW .
XX
OS Citrus mosaic sadwavirus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Sadwavirus.
XX
RN [1]
RP 1-2981
RA Iwanami T.;
RT ;
RL Submitted (24-SEP-1999) to the EMBL/GenBank/DDBJ databases.
RL Toru Iwanami, National Institute of Fruit Tree Science, Department of Plant
RL Protection; Fujimoto 2-1, Tsukuba 305-8605, Japan
RL (E-mail:tiwsw37@fruit.affrc.go.jp, Tel:81-298-38-6546, Fax:81-298-38-6546)
XX
RN [2]
RA Iwanami T., Kondo Y., Kobayashi M., Han S.S., Karasev A.V.;
RT "Sequence diversity and interrelationships among isolates of satsuma
RT dwarf-related viruses";
RL Arch. Virol. 146:807-813(2001).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2981
FT /organism="Citrus mosaic sadwavirus"
FT /isolate="LB-1"
FT /mol_type="genomic RNA"
FT /note="synonym: Citrus mosaic virus"
FT /db_xref="taxon:57325"
FT CDS <1. .2769
FT /codon_start=1
FT /transl_table=1
FT /gene="PP2"
FT /product="polyprotein"
FT /note="polyprotein including coat proteins"
FT /db_xref="GOA:Q9JGK6"
FT /db_xref="InterPro:IPR005306"
FT /db_xref="UniProtKB/TrEMBL:Q9JGK6"
FT /protein_id="BAA92935.1"
FT /translation="TFGQQQDIAIPLSSRFGNHPSLHVGELEIAVQSAVLSGVDTAMAI
FT MVSDASHDRLEEGFLSLTILRLGAGWMRHTIPIGITVFPTDPLVDRLLRLSVLTGGSPM
FT ADGRQVARLHYGLLGQAYTGAGEQRLTQYATRRINARQTHVTQFLEGNHIHIARSEDRQ
FT QPLPHMNLEYRPLSGSTRYVARPGGYQAVEGGRQSVDITQNFIAMPTHLTRSATLRDTD
FT VSEPANPNTGQGSERQIDDNSEIPVADGGPIGGRRLPRGSAFQRGFTEFSERNENKIEH
FT LFVPSMHGLSLREDIHLFTKNLEIPSTADFCKELVRYKVMAEAMNYRSASYYSRLLSGV
FT AILRPHFKFTCRLVTPILESIPLLIVWDDLSELTSKVARLSAAFEIIDSDHTRAAVYEV
FT RPSGPTDLLTPSKANYGMGGDLVIFSGGYGSSSLSSPLRLKIEASLLKDSQLGSGEVGV
FT PQGPSSMLSFHYLNEVDLGDVNLYTFLGSCKYDSKSVVNSRKYISICPAAGLVHNKGKA
FT AYLGLTASLFSMYNFWKGSYILKVDVLSKGSCAGAISIYVPPPGTSADHYSQSQLDTLP
FT RYELPWRGSGSARFEVENFSWIGWHLTKPQRFVTNEDWFSLNAGVVVVLNQPPTTRTGG
FT SSDIRVIFRIVKFKNLILKERSTTCDIFAGIKDASYTSPLLDVLDNTISAPASVASDPD
FT VGLDASSSVQTNDMLPRSFGAYYAYLLGGAASGKRWHSYVLPITMGHHRSEIGTTKTGY
FT LNEELDDTVRIRYSLRNPLHILCAAGAFYAADLLFTLVIDGDFTSERAFAQLGLIQTPL
FT MEYYEGYSTDRTLSSEGGCSNQLGVGKSYIQLLVPRRNYRARSVTTDTAVLFFETIGSL
FT SIRFTVSDRIRGVHLFVEAVGPIDIDGYGRGLNVGFTDKSFVLMPSLRTAA"
XX
SQ Sequence 2981 BP; 772 A; 622 C; 689 G; 898 T; 0 other;
ab032751 Length: 2981 04-APR-2006 Type: N Check: 7010 ..
1 acattcgggc agcagcaaga tattgccatt cctctatctt cgagatttgg
51 aaaccaccca tccctccatg ttggtgaatt agaaatagcc gttcaatcgg
101 cagtcttatc tggagtggat actgcaatgg ctattatggt ctctgacgct
151 tcgcatgata gactcgagga gggtttcttg agtctaacta ttttgagact
201 aggtgccggg tggatgcgcc atactatacc aattggcatc accgtcttcc
251 caacggatcc tctggtcgac cgtcttttga gactatcggt tttaaccggg
301 ggatccccta tggcagatgg gaggcaagtg gctaggctcc attatggatt
351 gcttggtcag gcatatacgg gcgcaggcga gcaaagatta actcaatatg
401 ctactcgaag aattaacgcg cgtcaaacgc atgttactca atttctcgag
451 ggcaatcaca ttcatattgc tcgctctgag gataggcagc agccgttacc
501 ccatatgaat ttggagtatc ggcctctatc tgggagtacc agatatgtgg
551 cacgacctgg tggttaccaa gccgtagaag gtggtaggca gagtgtagat
601 ataactcaga attttatagc aatgcctaca catctcacaa gaagtgccac
651 actccgggat actgatgtct cggagcccgc aaatccaaac actggacagg
701 gatctgaaag acaaatcgat gataatagcg agatccctgt tgccgatgga
751 ggaccaattg gtggtagacg ccttcccagg ggctctgcct ttcagagagg
801 attcacagaa ttttctgaaa ggaacgagaa taagatagaa catctttttg
851 ttccttctat gcacggtctc tcactcaggg aagatattca cttgtttact
901 aaaaaccttg agataccttc tactgctgat ttctgtaaag aattggttag
951 gtataaggtt atggcagagg ctatgaatta taggagtgcc agctactact
1001 cgcgcctatt gtctggggta gcaattttgc gaccccattt caaatttacc
1051 tgtaggctag taactccaat tctggaatcc atacctctac tcatagtttg
1101 ggatgatctt tcagagttaa catctaaagt tgcccgacta tctgcagcct
1151 ttgaaatcat tgattcagat cacactcgtg ctgctgttta tgaggttcgt
1201 ccatcaggac cgactgactt gttaacccct tcaaaagcca attacggtat
1251 ggggggcgat cttgtcatct tttctggtgg ctatggttct tcttctctat
1301 cttcgcctct aagacttaaa attgaagcga gtcttttaaa agattcgcag
1351 ttgggttcag gtgaagttgg agtgcctcaa ggtccatcat ctatgttatc
1401 atttcactat cttaatgagg tggaccttgg ggatgtaaat ttgtacactt
1451 tcctaggtag ttgtaaatac gattctaaat cggttgtaaa tagtaggaaa
1501 tatatttcta tttgtccagc agctggtctt gtacataata aaggaaaagc
1551 tgcttattta gggttaacgg cttccctttt ttccatgtat aatttttgga
1601 agggaagtta tattttaaaa gtggacgttc tttccaaggg gagttgtgct
1651 ggagctatta gcatatatgt gcctccacca ggcacaagcg ctgatcacta
1701 ctctcaatca caattggata ccctcccacg ttatgaactg ccatggaggg
1751 gatcaggatc tgccaggttc gaggttgaaa atttttcctg gattggttgg
1801 cacttaacca aaccccagcg ttttgtgacc aatgaagatt ggttttcatt
1851 gaatgctggg gtggtcgtag tactaaatca gccaccaaca acaagaactg
1901 gtggatcaag tgatataaga gtgatatttc gtattgtcaa atttaagaat
1951 ctcattctta aggaacgatc cacaacctgc gatatatttg caggtataaa
2001 agatgcgtcg tacacttcac cgcttttaga tgtgcttgat aacactatat
2051 cggcaccagc atcagtcgca tctgatccag atgttgggtt ggacgctagt
2101 tctagtgttc aaaccaatga catgctccca cgatcgtttg gcgcatacta
2151 tgcctatttg ttaggtggag cagcatctgg gaaaaggtgg cactcgtatg
2201 tgctgcccat aacaatggga caccacagaa gtgaaatcgg cactacaaaa
2251 actgggtatc taaatgaaga acttgacgac acagtcagga taaggtattc
2301 gttgcgcaat ccattgcata ttttatgcgc agcaggggcc ttttatgctg
2351 ccgacctcct tttcactctg gtaattgatg gagatttcac ttccgaacgt
2401 gctttcgctc agcttggatt aatccaaact cccttgatgg agtactatga
2451 gggatattct actgacagga ctctttcgtc cgaaggggga tgttccaacc
2501 aactgggcgt gggcaaatca tatattcaat tacttgtccc gaggaggaac
2551 tatagggcta gatctgttac aacggatact gctgttctat tctttgaaac
2601 aattggatcc ctttcaattc gattcactgt aagtgataga atcagagggg
2651 ttcacctatt tgttgaagca gtaggcccta ttgatattga tgggtatggg
2701 agaggactta atgttggatt tactgataaa tccttcgttt taatgccctc
2751 actccgtaca gccgcttaat cgtggcatta ggtgatgccc accggacctt
2801 aacgtgggtt gatatgtaaa tactagtgtg tattttctat ttgtttgttt
2851 tgtttgtttt cttaaaataa attggatttc aataagggtt tctcaaactc
2901 ttcccttacc gatccaggag tttcgcgtgt ttttcttgat ttctgtcgcg
2951 tgcggttaca accagtgaaa gtctggtggc c