Sequence of DPV Satsuma dwarf virus
Citrus mosaic sadwavirus PP2 gene for polyprotein, partial cds, isolate:Az-1.
ACC No: AB032752
Dated: 2006-04-04 | Length: 2656 | CRC: 874071763
ID AB032752 standard; genomic RNA; VRL; 2656 BP.
XX
AC AB032752;
XX
SV AB032752.1
XX
DT 28-MAR-2000 (Rel. 63, Created)
DT 04-APR-2006 (Rel. 87, Last updated, Version 4)
XX
DE Citrus mosaic sadwavirus PP2 gene for polyprotein, partial cds,
DE isolate:Az-1.
XX
KW .
XX
OS Citrus mosaic sadwavirus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Sadwavirus.
XX
RN [1]
RP 1-2656
RA Iwanami T.;
RT ;
RL Submitted (24-SEP-1999) to the EMBL/GenBank/DDBJ databases.
RL Toru Iwanami, National Institute of Fruit Tree Science, Department of Plant
RL Protection; Fujimoto 2-1, Tsukuba 305-8605, Japan
RL (E-mail:tiwsw37@fruit.affrc.go.jp, Tel:81-298-38-6546, Fax:81-298-38-6546)
XX
RN [2]
RA Iwanami T., Kondo Y., Kobayashi M., Han S.S., Karasev A.V.;
RT "Sequence diversity and interrelationships among isolates of satsuma
RT dwarf-related viruses";
RL Arch. Virol. 146:807-813(2001).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2656
FT /organism="Citrus mosaic sadwavirus"
FT /isolate="Az-1"
FT /mol_type="genomic RNA"
FT /note="synonym: Citrus mosaic virus"
FT /db_xref="taxon:57325"
FT CDS <1. .2358
FT /codon_start=1
FT /transl_table=1
FT /gene="PP2"
FT /product="polyprotein"
FT /note="polyprotein including coat proteins"
FT /db_xref="GOA:Q9JGK5"
FT /db_xref="InterPro:IPR005306"
FT /db_xref="UniProtKB/TrEMBL:Q9JGK5"
FT /protein_id="BAA92936.1"
FT /translation="RINVRQTHVTQFLEGNHIHIARSEDRQQPLPHMNLEYRPLSGSTR
FT YVARPGGYQAVESGRQSIDITQNFIAMPTHLTRSATHRDTDISEPANPNIEQGRANQSD
FT NNEVPVLEEEPTGERRLPGGSAVHRGFTEFSERNENKIEHFYVPSMHGLSLKEDIHLFT
FT KNLEIPSTADFCKELARYQVMAEAMNYRSASYYSRLLSGVAILRPHFKFVCRLVTPILE
FT SIPLMIVWDDLSQFTTKVSRLSSAFEIIDSDHTKAAIYEVRPSGPTDLLTPSKSHYGMG
FT GDLVIFSGGYGSSALSSPLRLKIEASLLKDSQVGSGEVGVPQGPSSMLSFHYLNEVDIG
FT DINLYSFLGSCKYDSKSVVNSRKYISVCPAAGLVHSKGKAAYLGLTASLFSMYNFWKGS
FT YILKVDVLSKGSCAGAISIYVPPPGTSADHYTQSQLDTLPRYELPWRGTGSARFEVENF
FT SWIGWHLTKPQRFVTNEDWFSLNAGVVVVLNQPPTTRTGGSSDIRVIFRIVKFKNLTLK
FT ERSTTCDIFTGIKDAAYTSPLLDVLDNSISVPASVASDPDVELDATSSTQANSVLPRTF
FT GAYYAYLLGGAASGKRWHSYVLPITMGHHRSEIGTTKTGYLNEKFDDTVRIRYSLRNPL
FT HILCAAGAYYAVDLLFTLVIDGDFTSERAFAQLGLIQTPLMEYYDGYSTDRTLSSEGGH
FT SNQLGVGKSYIQLLVPRRNYRARSVTTETATLFFETIGSLSIRFTVSEKIKGVHLFVEA
FT AGPIDVDGYGRGIDIGFTEESYVLMPSLRTAA"
XX
SQ Sequence 2656 BP; 709 A; 544 C; 602 G; 801 T; 0 other;
ab032752 Length: 2656 04-APR-2006 Type: N Check: 2943 ..
1 aggattaacg tgcgtcaaac gcacgtaact caattccttg agggtaatca
51 tatacatatt gctcgctctg aggatagaca gcagccgtta ccccatatga
101 atttggagta tcggccacta tctggaagta ctaggtatgt ggcacgacct
151 ggtggatatc aagctgtgga aagtggtagg cagagcattg atataacgca
201 gaatttcata gcaatgccta cgcacttaac aagaagtgcc acgcaccgag
251 atactgatat ctcggaaccc gcaaatccaa atattgagca gggacgggcg
301 aatcaatctg ataataatga agtccctgtc ttagaagaag aaccaaccgg
351 cgaacggcgc ctccctggag gttcagctgt tcacagagga tttacggaat
401 tctctgagag gaacgaaaat aaaatagaac atttttacgt tccctctatg
451 catggactgt cactcaagga agatattcat ttatttacca agaatcttga
501 gataccttct acagctgatt tctgtaagga attggccagg taccaggtta
551 tggcagaagc catgaattat aggagtgcca gctattattc tcgtctactg
601 tccggggttg caattttgcg acctcatttc aaatttgtat gtaggctggt
651 cactcctatt ctagaatcta tacctcttat gatagtctgg gacgatttat
701 cacaattcac aacaaaagtc tcccgattat catcagcctt tgaaattatt
751 gattcagatc ataccaaagc tgcaatatat gaggttcgac catcagggcc
801 cacggactta ttgactccct ctaaaagcca ttatggaatg gggggggatc
851 tcgttatctt ctctggtggt tatggttctt ctgccctttc ctcgcctttg
901 agacttaaga ttgaagcgag tctcctcaaa gactcgcaag taggttctgg
951 cgaagttggg gtgccccaag gaccctcttc tatgttgtca tttcattatc
1001 ttaatgaggt ggatattggg gatataaatt tgtattcttt tctaggtagt
1051 tgtaaatacg attccaaatc agttgtaaat agtagaaaat atatttctgt
1101 ttgtccagca gccggtcttg ttcatagtaa gggtaaggcc gcttatttag
1151 gtttaacagc ttcccttttt tccatgtata atttttggaa gggaagttat
1201 attttgaaag tggatgttct ttcaaaaggg agttgtgctg gagcaattag
1251 tatatatgtg cctcctccag gtacaagtgc tgatcactac acccaatcgc
1301 agttggacac cctcccacga tacgaattac cttggagggg aacggggtct
1351 gccagatttg aggttgaaaa tttttcctgg attggttggc atttgaccaa
1401 acctcagcgt tttgtaacca atgaagattg gttctcattg aatgctgggg
1451 tggtcgtggt gcttaaccaa ccaccaacaa caagaactgg tggctcgagc
1501 gatataagag tgattttccg tattgttaaa tttaaaaatc tcactcttaa
1551 agagcgatcc acgacctgtg atatattcac aggtataaag gatgcagctt
1601 acacttcacc gttgttagat gtacttgata attccatttc agtaccagct
1651 tcggttgcat ccgacccgga tgttgagctt gatgctacct ccagtactca
1701 agcgaatagt gtgctcccaa gaacatttgg cgcatattat gcgtatctat
1751 taggtggagc agcttccggg aaaaggtggc actcttatgt gctacctata
1801 acaatgggac atcataggag tgaaattggc acgaccaaga ctggatatct
1851 aaatgaaaaa tttgatgata cagttagaat taggtactca ctgcgcaatc
1901 cattgcatat tttgtgtgct gcgggtgcct actatgccgt tgatcttctc
1951 ttcactctag taattgacgg agattttacg tctgagcgag ccttcgccca
2001 acttggactc atccaaactc ctttgatgga gtattatgac gggtattcaa
2051 ctgatcggac tctctcatct gagggaggac actctaacca gttgggcgtg
2101 ggcaagtcat atattcaatt acttgtccca aggagaaatt acagggctag
2151 atccgtcact acggaaaccg caaccttatt tttcgaaacg attggatccc
2201 tttcaattcg attcactgtt agtgaaaaga tcaaaggagt ccatttattt
2251 gtggaggctg cgggcccaat cgatgtggat ggttacggaa gaggaattga
2301 catcggattc actgaagaat cctatgtttt aatgccctct ctccgtacag
2351 ccgcttagtt gcggcattag gtaatgcctg ctggacctta acgcaggatt
2401 gaccatatcg agagattgga aagaatctta agagttcttt tcctttctat
2451 atgtaggtgt tgcccaccgg accttaacgt gggttaatat gtaaatacta
2501 gtgtgtattt tctatttgtt tgttttgttt gttttcttaa aataaactgg
2551 gattcaaaaa gggtttctcg agttcttccc tttccgaccc aggagtccgc
2601 gtgtttttct tgatttctgt cgcgtgcggt tacgaccagt gaaaatctgg
2651 tgaccg