Sequence of DPV Japanese soil-borne wheat mosaic virus
Soil-borne wheat mosaic virus genomic RNA 1 for 152-kDa protein, 59-kDa readthrough protein, 37-kDa movement protein, complete and partial cds.
ACC No: AB033689
Dated: 2003-07-07 | Length: 7226 | CRC: -1596272232
!!NA_SEQUENCE 1.0
ID AB033689 standard; RNA; VRL; 7226 BP.
XX
AC AB033689;
XX
SV AB033689.1
XX
DT 21-APR-2000 (Rel. 63, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 4)
XX
DE Soil-borne wheat mosaic virus genomic RNA 1 for 152-kDa protein, 59-kDa
DE readthrough protein, 37-kDa movement protein, complete and partial cds.
XX
KW .
XX
OS Soil-borne wheat mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Furovirus.
XX
RN [1]
RP 1-7226
RA Shirako Y.;
RT ;
RL Submitted (19-OCT-1999) to the EMBL/GenBank/DDBJ databases.
RL Yukio Shirako, University of Tokyo, Asian Center for Bioresources and
RL Environmental Sciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan
RL (E-mail:shirako@ims.u-tokyo.ac.jp, Tel:81-3-5841-2677, Fax:81-3-5841-8036)
XX
RN [2]
RA Shirako Y., Suzuki N., French R.C.;
RT "Similarity and divergence among viruses in the genus Furovirus";
RL Virology 270:201-207(2000).
XX
DR GOA; Q9JGK1.
DR GOA; Q9JGK2.
DR GOA; Q9JGK3.
DR SPTREMBL; Q9JGK1; Q9JGK1.
DR SPTREMBL; Q9JGK2; Q9JGK2.
DR SPTREMBL; Q9JGK3; Q9JGK3.
XX
FH Key Location/Qualifiers
FH
FT source 1. .7226
FT /db_xref="taxon:28375"
FT /mol_type="genomic RNA"
FT /organism="Soil-borne wheat mosaic virus"
FT /isolate="JT"
FT /strain="Japanese"
FT /segment="1"
FT CDS 117. .4121
FT /codon_start=1
FT /db_xref="GOA:Q9JGK3"
FT /db_xref="SPTREMBL:Q9JGK3"
FT /transl_table=1
FT /gene="ORF1"
FT /product="152-kDa protein"
FT /protein_id="BAA94796.1"
FT /translation="MPIDSSNILGIINEEEVVRAAIATSATRTNSELHRTVCEQIREQF
FT LDTVENQKQKKKIDVRRDLTQEQLQTLNELYPERHIVTSGCERGTHSFAAASRKIETDL
FT LLSRMPKNANVYDIGGNWATHLKRKDTRKVHCCCPVLDFRDAQRKTTRWLSVEKFLSEK
FT DSISEHCGQKVLEIQEDEDRISNNLRKGAVAPEDLTGRWYCENRFEDCVYRAEKAYGMA
FT IHSIYDISLDDLVNAMEEKRIKYLVGTFLFSVELFLGKKRGELTSVDGFFEIDGGNVKY
FT GFYDDTNCGYRHDLQQLMEYLTKTFVKAKGGSVFYLELTEQRGDVMFFSLTDATEARMH
FT GVVEDESFKCIPIESKDSVVFPLFELNKKSDELEFTEVLLPKSFVRRTIEYTARLKTNQ
FT LNPETVNSYLTSTNNTVIIGGSAKKTVEKVDAMLIPQITTTLIVWTELMNARQKKVLDR
FT LRIQMKDDVGFMALAHASFSKMFGKVSFYQKALRSYANWISYCHGTDAIEFKNVPLYVE
FT VKDRVKMWKQHAPNHGFSFDLEDLDEKIQLYKETERERKAISEFVVSDKLGDLSAAVCE
FT KEAREVSVEYRDRRRKVEATDLRNGEVFTNFVDEWCNKEDHFNHVHIEVENKYSLLVKI
FT VIAVWEAIVPPMQFAPVYIDDEERDPSDAESVVELDLSETDDGSGKGDYAEKPGSVEKA
FT EKPIEARVSLEKGKEKVEVEDSAIRRGSGSSSPDSETSMEDELVSDGESLFGRSCQATI
FT YSSTSLYGSSEDDTSVGSASSEIDSRVLEAVEAAIDEMEKEVSAEVLAAVVVVTESSEP
FT EVSEVVVENAATVECKEQVVVDTTDSESDEERAKSWGSMAEEESDDTFYMNTMLISNKV
FT QRSSLPKQPDFNKYNTVQQKAKQEYLWYLRCKMISDRTTLRSIIEDHLNGLYHNGNCDL
FT PKNSCFLDYTKSVGGEWLYAKPLKAGHCYGVGFSLNSKGKIGKCELLKLMWDVDARGQP
FT LERPFNTKMFQFVLLNDLTFLMNEMIIFRNLQDTLQRKERTKQASIVLKDGVPGCGKST
FT WILNNANYIKDVVISVGKEAKEDLKEKFMKKYKCTESELGRIRTVDSYLMHDCGKKLRA
FT TTVHFDEALMTHAGAVYFCADLLGARKVICQGDSQQIPFVNRVESIKLQFAKLVIDKTD
FT LIRMTYRSPIDVAHYLNYKSFYTGGRITTKNEVVRSMSVVGPRNVRPMTSVYSVPYVPG
FT VQYLTFTQTEKDDLFKALRSKGHVNVNTVHETQGKTFDDVILVRLKTTENEIYPGGRNS
FT KPYTIVGLTRHRRSLVYYTAIEDRLFFDLTEMRGVMEDKLLKNLNVENGK"
FT CDS <4122. .5645
FT /codon_start=1
FT /db_xref="GOA:Q9JGK2"
FT /db_xref="SPTREMBL:Q9JGK2"
FT /note="polymerase"
FT /transl_table=1
FT /product="59-kDa readthrough protein"
FT /protein_id="BAA94797.1"
FT /translation="RFGSKYESILTCDREVKVPDTGDLVTIQDFYDRVFPGNSTVDSYF
FT DGYEVATTDISIEVENCTVHTNKNTKVWQEKQGLVPVMRTAMPEKRQNGMVESLLALKK
FT RNMAAPKLQEAVNEFEVIEHTIDRARTIFLNEDLIDTTPASTVESNMRWWEKQSYTARK
FT QLLSETKILHEIDVCTYNFMIKNDVKPKMDLTPQSEYAALQTVVYPDKIVNALFGPVMK
FT EINERIRYALKPHVVYNSRMNAEELNRTVEFLDPEEEYQSFEIDFSKFDKSKTSLHIRT
FT VIEFYKLFGLEEMLAFLWEKSQCQTTVKDRLNGITAYLLYQQKSGNCDTYGSNTWSAAL
FT ALLETMPLEKAKFMIFGGDDSLILFPKQLCVEDPCRRLASLWNFDCKLFDFQHNMFCGK
FT FLLKVGDKFKFAPDPLKLMTKMGRKDIKDGALLSEIFVSIGDNYRAYRDYRIIEQLAPA
FT VRERYRTGEDPTAALIALKKYIFSFELFAKAFNYYGNFVVSKVTRDFEW"
FT CDS 5692. .6666
FT /codon_start=1
FT /db_xref="GOA:Q9JGK1"
FT /db_xref="SPTREMBL:Q9JGK1"
FT /transl_table=1
FT /product="37-kDa movement protein"
FT /protein_id="BAA94798.1"
FT /translation="MTTKDVSSDSYEAAYNAMLDAQDATGLTADDVKNQRQRSFNVVNK
FT YVEKALLQKDVATKMRDKWISFTKSNKEEGTPYNISYSCVMLNIIPTVPSTYGGTVEIS
FT LIDSGLSLFNNVLPDQTQMMELGKGPQLMCFFMHYSIPINDEGRVIKLAFKIDCEMASP
FT KMSVMNVYTYWTQRQGYLSLYSEPQRSTISKLVVGYDETLKLKTREDVRRFASRSLVLN
FT NMKQHVPKMLPEQINLLKENVPLNRKESTVDLTKEEREKHEKLEQIRKQRAVATERSKK
FT EMQQREAQLQAEQKRKETADKLEEKSKLKNQREHQKLDSENIV"
XX
SQ Sequence 7226 BP; 2111 A; 1206 C; 1874 G; 2035 T; 0 other;
AB033689 Length: 7226 July 15, 2003 09:17 Type: N Check: 9360 ..
1 gtattacaaa aactctttca gtcgttagac tgcttaaaga aaaattgtta
51 atacacttgc tgtatatttg cgaggcacgc ttttgcgata aatcctcatc
101 aaatttacag gacactatgc cgatcgatag tagcaacatt ctcgggataa
151 taaacgaaga ggaagtagtc agggcagcga tagctactag cgctactcgg
201 actaattctg aacttcatag aactgtttgt gaacagattc gtgagcagtt
251 cttggatact gtagaaaatc aaaaacaaaa aaagaaaata gatgtaagga
301 gggatctaac tcaggaacaa ttgcaaacat tgaatgagtt atatccggag
351 agacatattg ttacgagtgg ttgtgagaga ggtacgcaca gctttgctgc
401 agcttcgagg aagattgaaa cagatttgtt attgagtagg atgccgaaga
451 atgccaatgt ttatgacatt ggtggtaatt gggctactca tctgaaaaga
501 aaagacactc ggaaagttca ttgttgttgt ccggtgctcg attttcgtga
551 cgcgcagcga aaaacaactc ggtggctttc ggtggagaaa ttcctgtcgg
601 agaaagatag catatctgaa cactgcgggc agaaggtgtt agagattcag
651 gaagatgaag atcggatctc aaacaacttg aggaaaggtg ctgtggctcc
701 ggaagatttg actggtcgtt ggtactgtga gaacaggttc gaagactgtg
751 tgtacagggc ggagaaggct tatggtatgg ctattcatag tatttatgat
801 atatcccttg atgatttggt aaacgcaatg gaggagaaga ggattaagta
851 tctggtgggt actttccttt tctctgtcga actttttctt gggaaaaaac
901 ggggggaatt gacatctgtc gatggtttct ttgaaattga cggtggtaac
951 gtcaaatatg ggttttatga tgacacgaat tgcggttaca ggcacgatct
1001 gcagcagctg atggagtatt tgactaagac tttcgttaag gcgaaaggtg
1051 gttcagtctt ctatcttgag ttgactgagc agcgaggtga cgtaatgttc
1101 ttttcgctga ctgatgccac agaggctaga atgcatggcg ttgttgaaga
1151 cgaatcgttc aaatgtatac ctattgagag caaagacagt gtggtttttc
1201 ctttgtttga attgaacaag aaatctgacg agttggagtt cactgaagtc
1251 ttgttgccaa agtcttttgt gaggcgcact atagaatata cagctcgatt
1301 aaaaactaat cagttgaatc cagagacggt gaacagttac ctgacttcaa
1351 ccaataatac tgttattatt ggtggatctg caaaaaaaac tgttgaaaaa
1401 gttgatgcga tgcttatacc tcagattact acaactctga tcgtatggac
1451 tgaattgatg aatgcgaggc agaagaaagt gttagacagg ttgaggatcc
1501 aaatgaagga cgacgttggt ttcatggcgt tggctcacgc ttctttttcg
1551 aagatgttcg ggaaggtgag tttctatcag aaagcgttgc ggtcttatgc
1601 taattggatc tcttactgtc atggaacaga tgctatcgag tttaagaacg
1651 tgcccttgta cgttgaggtt aaagatcgcg ttaagatgtg gaaacaacac
1701 gcccctaatc acggtttctc ttttgatctg gaagacttgg atgagaagat
1751 acaattgtac aaggaaacag aaagagaaag gaaagcgata agcgagtttg
1801 ttgtttctga taaattgggc gatctttcag cggctgtgtg cgagaaggaa
1851 gcacgggagg tgtctgtaga gtatcgcgat cgtcgtcgga aagttgaggc
1901 tactgatttg cgaaatggtg aggtattcac caattttgtg gatgagtggt
1951 gcaacaagga agatcatttt aaccatgtgc atattgaagt tgaaaacaaa
2001 tattctcttt tggtcaagat tgtcatagcg gtttgggaag ctatagtacc
2051 acctatgcag tttgcaccag tttatattga tgatgaagaa agagatcctt
2101 cagatgctga aagcgtggta gagttggatc tttcagaaac cgatgatgga
2151 agtggtaagg gcgattacgc tgaaaaacct ggcagcgtgg agaaagctga
2201 gaaaccaatt gaagcgaggg tttctttaga gaaagggaaa gaaaaagtcg
2251 aggtggaaga ctcggcgatt cgacgcggta gtggttcatc gtcaccagac
2301 tcagaaacgt caatggagga tgagctggta agtgatggtg aatctctttt
2351 tgggagatcc tgtcaggcga ctatctattc gtccacaagt ttgtatggat
2401 caagcgaaga cgacacatct gtagggtccg catcttctga aatagattca
2451 agggtcttag aagctgtgga agctgccatt gacgagatgg aaaaggaagt
2501 gtcggcggaa gtcttagctg ctgtggtggt tgtgactgaa tctagcgaac
2551 ctgaagtttc tgaggtcgtg gttgaaaacg cggcgacagt cgaatgcaag
2601 gaacaggttg tagttgatac tacagactct gaaagtgatg aggagcgcgc
2651 gaaatcttgg ggttctatgg ctgaggaaga aagtgacgac accttctata
2701 tgaacacaat gcttatttcg aataaggtgc agagaagttc gttacctaag
2751 cagccagatt tcaacaagta taatacagtg cagcagaaag ctaaacagga
2801 gtatctgtgg tacttgcgat gcaagatgat ttctgacaga actactctta
2851 ggagtattat cgaagatcat ttgaatgggt tgtatcacaa tggaaactgc
2901 gatctaccga agaattcgtg ttttttggac tacactaaga gtgtcggagg
2951 ggagtggtta tatgctaaac cgctgaaggc cggtcattgt tacggtgttg
3001 gtttttctct gaattctaaa ggtaagattg gtaagtgtga actgctgaag
3051 ctgatgtggg acgttgatgc gagaggacag cctttggaaa ggccgtttaa
3101 cacaaagatg tttcaatttg tgttactgaa cgatctcact ttcctgatga
3151 acgaaatgat catattcagg aatcttcaag acactttgca gcgcaaggag
3201 cggactaagc aagcgagtat tgtactcaag gatggtgttc ctggatgcgg
3251 taagtcgacg tggatcttga acaatgctaa ctacattaag gatgtggtca
3301 tttcggtcgg taaggaggcg aaggaggatt tgaaagagaa gttcatgaaa
3351 aaatacaagt gcaccgagag tgagctaggt aggataagga ccgttgattc
3401 gtatttgatg catgattgcg gaaaaaaact gagggcaacc acagtgcatt
3451 tcgatgaagc tctgatgact cacgctggcg cagtgtattt ttgtgctgat
3501 ctacttgggg cgaggaaggt catctgccaa ggagattcgc agcagatacc
3551 ttttgtgaac agggtggagt ctatcaagtt gcaattcgca aaactggtca
3601 ttgacaagac ggatctcatc aggatgacct atcgatcgcc tatagacgta
3651 gcgcactacc ttaattataa gtcattctac acaggcggga gaattacaac
3701 taagaatgag gtggtgcgtt cgatgagcgt ggtcggtcca aggaatgtga
3751 gaccgatgac ttcggtgtat tccgtgccgt acgtgcctgg tgtgcagtac
3801 ttgactttta ctcaaactga gaaggatgat ctgtttaaag cattgaggtc
3851 aaaaggacat gttaatgtta acactgtgca tgagactcaa ggtaagactt
3901 ttgatgacgt cattctcgtc cgtttgaaaa ccacggaaaa cgagatatat
3951 ccaggtggac gcaactctaa accctacact attgtgggtc tgactagaca
4001 cagaaggtct ttggtctact acactgctat tgaggacagg ttattctttg
4051 atctcacaga aatgcgtggt gtgatggaag acaagctgtt gaagaatctt
4101 aacgtggaga acgggaaatg acggtttggg tcgaagtatg aatcaatttt
4151 gacctgtgac cgtgaagtaa aagttcctga tactggtgat ttagtcacca
4201 ttcaggattt ttatgatcgg gtttttccag gtaattcaac ggtggattct
4251 tacttcgacg ggtatgaggt tgcgacaact gatatcagta ttgaagtcga
4301 aaactgcacc gttcatacga ataagaatac taaggtttgg caggagaaac
4351 agggtctagt acctgttatg cggactgcta tgcctgaaaa aaggcagaat
4401 ggtatggttg agtcactgct ggcgctgaag aagagaaaca tggctgcacc
4451 caaactgcag gaggcagtta atgagtttga ggtgatcgaa cacacgattg
4501 atcgtgcgag aactatattt ctgaatgaag atctgattga cactacaccg
4551 gcatccactg ttgaatctaa tatgcgatgg tgggaaaagc aatcgtatac
4601 tgcaaggaag cagctgctga gtgagacgaa gatacttcat gagatagatg
4651 tatgcacata taatttcatg atcaagaatg atgtgaaacc gaaaatggat
4701 ttgacacctc agtctgagta cgcggccctg caaaccgttg tatatccaga
4751 caagattgta aacgctcttt ttgggcctgt gatgaaggag atcaacgaaa
4801 ggattcgtta tgctcttaag ccgcatgtag tttacaattc tcgaatgaat
4851 gctgaagaac tgaaccggac tgttgaattt cttgacccgg aggaagagta
4901 ccagtctttt gagattgatt tctcgaaatt tgataaatcc aagacttcgt
4951 tgcatattcg aactgtgatc gaattctaca aactttttgg cttagaggag
5001 atgttggctt ttttgtggga gaaatcgcaa tgtcagacca ctgtgaaaga
5051 tcgtcttaat ggtataacgg catatttgtt ataccaacaa aagtctggca
5101 attgtgatac ctacggctcg aacacttggt cggcagcatt ggctttgttg
5151 gaaactatgc cattggagaa ggccaagttc atgatttttg ggggagatga
5201 ttcactcatc ttattcccaa agcagctttg tgtcgaagat ccatgcagga
5251 ggttagcatc actgtggaat tttgattgta agttgtttga ttttcagcac
5301 aacatgttct gtggaaaatt tttgctgaaa gtcggagata agttcaaatt
5351 tgcacctgat cctttgaagt tgatgactaa aatggggcgc aaagatataa
5401 aagatggagc gttgctttct gagattttcg tatccattgg agacaattac
5451 agggcatacc gcgattatag gattattgag cagctcgctc ccgctgtgcg
5501 agagcgatac aggactggtg aggaccctac tgctgctctg attgcattga
5551 agaaatacat cttcagtttt gagttgttcg ctaaagcgtt taattattat
5601 ggtaattttg tggtgagtaa ggtgactaga gactttgaat ggtaatcgag
5651 gtctgtgttg tttttcttac tcagtgctta ttttattaaa catgacaact
5701 aaagatgttt caagtgattc ctatgaggcg gcgtacaatg ctatgttgga
5751 tgcgcaggat gcaactggtc tgactgctga tgatgtaaaa aatcagagac
5801 agaggagttt caatgttgtg aataagtatg tggagaaggc actacttcag
5851 aaagatgtgg cgacaaagat gagagacaag tggatcagtt ttactaagag
5901 caataaagag gaaggcactc cctacaatat ttcttacagt tgtgtgatgc
5951 tgaacatcat accgactgtg ccaagtacct acggtggtac cgtagagatt
6001 tctctgatcg attctggcct gtcactgttt aataacgtgt tgcctgatca
6051 aactcagatg atggagttag gtaaggggcc tcagcttatg tgtttcttta
6101 tgcattatag cataccgatc aacgacgagg gtagggtgat taagttggcg
6151 ttcaagattg attgtgagat ggcttcacca aaaatgagtg tgatgaatgt
6201 ttacacttac tggacgcaac gtcaaggtta cctttcactg tattcggaac
6251 cacagcgttc tactatttcg aagttagtcg ttggttacga tgaaactttg
6301 aaattgaaaa cgcgtgaaga cgtgcgacgt tttgcgtcac ggtctttggt
6351 tctgaataac atgaagcagc atgttccgaa gatgctccct gaacaaatca
6401 atttgctcaa ggagaacgtt ccactaaacc gtaaggaatc tactgtagat
6451 cttactaagg aggagcgtga aaaacatgag aagttggaac agattcgaaa
6501 acaaagagct gtggcgactg agcgcagtaa gaaggagatg caacagcgtg
6551 aagctcagtt gcaagccgaa cagaagcgca aggagactgc tgataagtta
6601 gaggagaaat cgaaactgaa gaatcagcgt gagcatcaga agttggactc
6651 tgaaaacata gtgtgattat tactattata ctttgtatat tgtctatata
6701 tatatggtgt atgtgtgtat atgtttatat gtattggtta ttgttggata
6751 atctatattc taagctttgc atgtgtcata cattttgagt ggtactattt
6801 tcgtatgtcg gtttgtatac atattgtatt attaccttgc atatgttcta
6851 cctttgagtg gtactttttc gcacgtaaaa tgcaaaattt agtctagtgt
6901 actgggcaga agtacaccgt tgttgatacg ataatcaacg ctgatggtaa
6951 atcagattct atttaccgga agatattcat tcttctcaaa aaagaacgtg
7001 gtcttcacga tagaagatgg tgcttgttag ttcacctaaa tcgaactaac
7051 gacggggcgt tccgcagtac gtttaaactg cgggctttcc tctagtttct
7101 actgatgtaa tttaaaaaag atcggtattt gactatgatg aggagcgact
7151 aggggtcgcg gttgctaaga cacagcaatc aagaggggtg caaatccccc
7201 cctgaaccgg agggttatcc ggccca