Sequence of DPV Torque teno mini virus 3
Torque teno mini virus 3 DNA, complete genome, isolate: TLMV-NLC026.
ACC No: AB038630
Dated: 2009-11-02 | Length: 2897 | CRC: 1725379982
ID AB038630; SV 1; circular; genomic DNA; STD; VRL; 2897 BP.
XX
AC AB038630;
XX
DT 04-APR-2000 (Rel. 63, Created)
DT 02-NOV-2009 (Rel. 102, Last updated, Version 3)
XX
DE Torque teno mini virus 3 DNA, complete genome, isolate: TLMV-NLC026.
XX
KW .
XX
OS Torque teno mini virus 3
OC Viruses; ssDNA viruses; Anelloviridae; Betatorquevirus.
XX
RN [1]
RP 1-2897
RA Mishiro S., Hijikata M., Takahashi K.;
RT ;
RL Submitted (24-FEB-2000) to the EMBL/GenBank/DDBJ databases.
RL Contact:Shunji Mishiro Toshiba General Hospital, Department of Medical
RL Sciences; 6-3-22 Higashi Oh-i, Shinagawa, Tokyo 140-8522, Japan
XX
RN [2]
RX DOI; 10.1159/000025034.
RX PUBMED; 10971131.
RA Takahashi K., Hijikata M., Samokhvalov E.I., Mishiro S.;
RT "Full or near full length nucleotide sequences of TT virus variants (Types
RT SANBAN and YONBAN) and the TT virus-like mini virus";
RL Intervirology 43(2):119-123(2000).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2897
FT /organism="Torque teno mini virus 3"
FT /isolate="TLMV-NLC026"
FT /mol_type="genomic DNA"
FT /note="TLMV"
FT /note="originally submitted as 'TTV-like mini virus'"
FT /db_xref="taxon:687371"
FT CDS 341. .670
FT /codon_start=1
FT /note="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:Q9JG51"
FT /protein_id="BAA93608.1"
FT /translation="MSFTFWKPTPYGHRQKENNWINEIIHFHDNFCGCDEPIKHLIWKL
FT AHNAPQLNIEKEDLQKLQKCLPTTTTDGTTGEDQHTDAADGDADNIDEGDLDRLFEEDF
FT GDDTR"
FT CDS 532. .2517
FT /codon_start=1
FT /note="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:Q9JG50"
FT /protein_id="BAA93609.1"
FT /translation="MPPYNYYRWNNWRRPTYRRRRWRRRQYRRRRPRPFIRRRFWRRHT
FT VRRRRIKKKLKKIKIYEWQPTVIKKCHIKGTIPLIQGGKDRQGFNYAQYQDSYIPSHKG
FT GGGTWSIMVFSLGALYEEWERLNNVWTKTNNGLPFARYCGCRFKFYRQEYYDYIVHYSI
FT CYPMTDTEDQHLNSQPHRLIQGRKKIVVHRYNKQIHKKPYVKKRIRPPAMLQSHWYFQQ
FT EICNTGLLLITTSICNLNNYWLSNNHLSNNISFWSVNTRLFSNPNFQNTDSTVGYTPKD
FT GVYLYGTYNGTPTQNLTWMHMIYLGNTHKYQQGLAPIDMSGPTSNQIKALHEKQNWGNP
FT FHYNFANKQVRFFISSKNPTTIQDTDLNNPISNTTILDEPVFQECRYNPYKDKGYGNEA
FT YFLSNVIAKKKAWDPPDNKLLYNSGYPCWLLPWGWLDWQLKLKQINQIGINYNYIFKTD
FT QILPKLPAYIPINPSFVFPEEDQLTETDKLHWYPKNDYQLNSISTLCSSGPGTYQFDKT
FT ESVQVNAFYDFFFKWGGCPAPMEEVKDPCNQPHFPIPTEIIEGRKIQNPNTNKSEYLYC
FT FDERRQILTKTAQKRICEDIKPETFMFTDGSKLNVPILQQKEKTQTTSSEEEAETPLLK
FT KLKLLKRHQRKLQRKLQRLTTSHLSE"
FT CDS 2099. .2494
FT /codon_start=1
FT /note="ORF3"
FT /db_xref="InterPro:IPR008474"
FT /db_xref="UniProtKB/TrEMBL:Q9JG49"
FT /protein_id="BAA93610.1"
FT /translation="MLFMTFFLSGEDAQHQWKKSKTPVTSHTFPSPLKSLKDVKSRIQT
FT QTNQNTYTASTKDDKFLQKLLKKEYVKTLNLKHLCSQMDQNSTSQYSNKKKKHRRHRAR
FT KKQKHHYSRSSSSSSDTRESSSESSSD"
XX
SQ Sequence 2897 BP; 1155 A; 663 C; 438 G; 640 T; 1 other;
ab038630 Length: 2897 02-NOV-2009 Type: N Check: 6126 ..
1 ttattaatat tcaacaggaa aaccacctaa tttaaattgc cgaccacaaa
51 ccgtcacata cttccctttt ttacaatact tcccttttta ctcataaata
101 ttcattacat tatttaataa tcaccgtcat tccggggagg agccaattac
151 ctatataaca aactacactt ccgaatggct gagtttatgc cgccagacgg
201 agactggaac accacagtga ctccaggctg acttagggcg ggtgccgaag
251 gtgagtgaaa ccaccgtagt caaggggcaa ttcgggcaaa gtcggtctgg
301 cggactgggc aagaaactta aaactattta ttttacagat atgtccttta
351 ccttttggaa accaactcct tacggacacc gccaaaaaga aaacaactgg
401 ataaatgaaa tcatccattt tcatgacaac ttctgtggct gcgacgaacc
451 catcaaacat cttatttgga aactagcaca taatgcccca caactaaaca
501 ttgaaaaaga agatttacaa aaactacaaa aatgcctccc tacaactact
551 acagatggaa caactggaga agaccaacat acagacgccg ccgatggaga
601 cgcagacaat atagacgaag gagacctcga ccgtttattc gaagaagatt
651 ttggagacga cacacggtaa gaagacgacg tattaaaaag aaacttaaaa
701 aaattaaaat atatgagtgg caaccaactg taattaaaaa atgccacata
751 aaaggaacaa ttcctcttat acaaggagga aaagatagac aaggttttaa
801 ctatgctcaa taccaagact catatatacc ttcacacaaa ggtggaggtg
851 gaacttggag cataatggta ttttctttag gagcattata tgaagaatgg
901 gaaagactaa acaatgtatg gacaaaaact aacaatgggt taccatttgc
951 tagatactgt ggatgtagat ttaaatttta tagacaagaa tactatgact
1001 atatagtaca ttactcaata tgctacccta tgacagacac agaagaccaa
1051 cacctaaact cacaaccaca cagactaata caaggcagaa aaaaaattgt
1101 agtacacaga tataataaac aaattcacaa aaaaccatac gtaaaaaaaa
1151 gaataagacc accagcaatg ctacaatcac actggtactt tcaacaagaa
1201 atatgtaaca caggcctact actaataaca acttcaatat gcaaccttaa
1251 caattactgg ctatcaaaca accacctaag taacaatata agcttttggt
1301 ccgttaacac aagactattt tcaaacccca actttcaaaa cacagactcc
1351 acagtaggat acacaccaaa agacggagtc tacctttatg gaacatataa
1401 tggaacacca acacaaaact taacatggat gcacatgata tatttaggaa
1451 acactcacaa ataccaacaa ggactagcac caatagatat gtcaggacct
1501 acaagtaacc aaataaaagc attacacgaa aaacaaaact ggggaaaccc
1551 attccattat aactttgcaa ataaacaagt aagatttttc atatcaagca
1601 aaaacccaac aaccatacaa gacacagact taaacaaccc tataagtaat
1651 acaaccatat tagatgaacc agtttttcaa gaatgtagat acaatcccta
1701 caaagataaa ggatacggaa atgaagcata ctttttatca aatgtcattg
1751 ctaaaaaaaa agcctgggat cccccagaca acaaactact atataactca
1801 ggctatccct gctggctact accttgggga tggctagatt ggcaactaaa
1851 acttaaacaa ataaatcaaa taggcataaa ctacaattat atatttaaaa
1901 cagatcaaat actaccaaaa ctcccagcat acataccaat taacccctcc
1951 tttgtcttcc ctgaagaaga ccaactaaca gaaacagaca aactacactg
2001 gtatccaaaa aatgattatc aattaaactc tatatcaaca ctatgtagct
2051 ccggcccagg aacatatcaa tttgataaaa cagaaagtgt tcaagtcaat
2101 gctttttatg actttttttt taagtgggga ggatgcccag caccaatgga
2151 agaagtcaaa gacccctgta accagccaca ctttcccatc cccactgaaa
2201 tcattgaagg acgtaaaatc cagaatccaa acacaaacaa atcagaatac
2251 ttatactgct tcgacgaaag acgacaaatt cttacaaaaa ctgctcaaaa
2301 aagaatatgt gaagacatta aacctgaaac atttatgttc acagatggat
2351 caaaactcaa cgtcccaata ctccaacaaa aagaaaaaac acagacgaca
2401 tcgagcgagg aagaagcaga aacaccacta ctcaagaagc tcaagctcct
2451 caagcgacac cagagaaagc tccagcgaaa gctccagcga ttaacaacat
2501 cacatctatc agaataacaa aatgtgttca aaaagcatat ctttttgaac
2551 caccacaaaa aaacagaaga atgacaccaa aagaacaaga acaagaaaaa
2601 ctagacgcac aaatctggaa aagaccacaa agacttttta tactagatcc
2651 accattttat ccatggtgcc cccctgaacc tacagtaaac tttgacctta
2701 aatacaaata tgaataaaga aataaagggc aaggccccat taattcaaac
2751 tcggtgtctg ttcctttaag tctcaactta tttaaacagt ctccgcctcc
2801 ctaaattagg gcgccaaaag ggggctccgc ccccttaaac ccntaggggg
2851 ctccgccccc taaaaccccc aagggggtta cgccccctta caccccc