Sequence of DPV Torque teno douroucouli virus
Torque teno douroucouli virus DNA, complete genome, isolate: At-TTV3.
ACC No: AB041961
Dated: 2009-11-02 | Length: 3718 | CRC: -886070614
ID AB041961; SV 1; circular; genomic DNA; STD; VRL; 3718 BP.
XX
AC AB041961;
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DT 15-DEC-2000 (Rel. 66, Created)
DT 02-NOV-2009 (Rel. 102, Last updated, Version 4)
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DE Torque teno douroucouli virus DNA, complete genome, isolate: At-TTV3.
XX
KW .
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OS Torque teno douroucouli virus
OC Viruses; ssDNA viruses; Anelloviridae; Zetatorquevirus.
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RN [1]
RP 1-3718
RA Okamoto H.;
RT ;
RL Submitted (19-APR-2000) to the EMBL/GenBank/DDBJ databases.
RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and
RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi,
RL Kawachi-Gun, Tochigi 329-0498, Japan
XX
RN [2]
RX DOI; 10.1006/viro.2000.0588.
RX PUBMED; 11080484.
RA Okamoto H., Nishizawa T., Tawara A., Peng Y., Takahashi M., Kishimoto J.,
RA Tanaka T., Miyakawa Y., Mayumi M.;
RT "Species-specific TT viruses in humans and nonhuman primates and their
RT phylogenetic relatedness";
RL Virology 277(2):368-378(2000).
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CC Partial sequence of this TT virus isolate (nt 285-382) has been
CC deposited as accession no.AB032279.
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FH Key Location/Qualifiers
FH
FT source 1. .3718
FT /organism="Torque teno douroucouli virus"
FT /isolate="At-TTV3"
FT /mol_type="genomic DNA"
FT /isolation_source="Douroucouli"
FT /note="originally submitted as 'Torque teno virus'"
FT /note="synonym: TT virus"
FT /db_xref="taxon:687383"
FT CDS 462. .854
FT /codon_start=1
FT /transl_table=1
FT /note="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:Q9DUB8"
FT /protein_id="BAB19319.1"
FT /translation="MGDWFMQGSPPDFAVQEDRWLKAVESCHQLFCSCSSAWDHLRNIL
FT QTRGYWPQGPPPYRSEPHTEHSRPPPPKKRRPWCGGDGGGDAGAGPSGVAGTAAGGAGG
FT DGAVGPVEEDDPTVADLIAAMEEDER"
FT CDS 692. .2854
FT /codon_start=1
FT /transl_table=1
FT /note="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:Q9DUB7"
FT /protein_id="BAB19320.1"
FT /translation="MVWRRRWWRRRRRPVWRRRYRRWRRRRRWRRRPRRRRRPYRRRPY
FT RRYGRRRKVRRRRRRTLVVRQFQPPYQRRCRVSGLEPLLYFGKKEEERHFYGNRQIMKD
FT VDQTEGGGVTDGVFSLEELYESYQEGWNHWSASNQMLPLVRYFGCKITLYRSATDSYIF
FT WWTNRPPFQVDRQFWVGMHPYWMLRRGRKVVMLSKQLKPFAKDHVTIKIGPPALMKTKW
FT YFARDFCKTWLLQWRACFFNPIDPYIPRGANNTTVTFYGFPGHSYPSQSLYYTWQEHLA
FT ETNVWGITNESEKTKFEALRKAWNEQATKGPVAGYKAVLQAMNAWASVAAPGPEGSNFA
FT KGTNVALGLANLLWLIYSQYYWQNRSPSPWGLPGATLEAMKHPEAWKPYAYKYSWSHDK
FT GKGNRFAICDWPYKDQHGEQTTPLNFDLEIKDAPLWWCVTAAYDWAIRQGKNPANWSFF
FT VRSDYTWPRADNIILAYSSYFADNVVKNKYADPQHATGGYFTLYRAPNLIDGREAIDII
FT YRNGPFAPKQEESTGNATIKYRFYFKWGGTQRPPRPQPTDPCQQPRWEGPNFPPFDGRA
FT RIDNPSDQDPRSYFWPFDTRRGSLTASAVDRVKRSLDAVTEPSETRLREGEETYGLPPP
FT EKRARWGFPSILPTENPTDEDERYLEAEADTSSSDATDGVPETPFELLQHIQRDRDKRR
FT ELRGRLARLILRLRRRQDPELQNYYP"
FT CDS 2409. .2864
FT /codon_start=1
FT /transl_table=1
FT /note="ORF3"
FT /db_xref="UniProtKB/TrEMBL:Q9DUB6"
FT /protein_id="BAB19321.1"
FT /translation="MAELASIIRPTKTPGRTSGRSTPGAAHLPPPLSTGLSDLLMLLQS
FT PQKPGSGRARRRTVCRPRRSGPDGDFRPSSRRRTPRTRTSDTSRRRRTPAAPTRRTVCR
FT RRPSSSSNTSSGTATSGESSEADWRDSSSASDDDRIPSSKTTTLKAR"
FT repeat_region 3644. .3718
FT /rpt_unit_seq="GC"
XX
SQ Sequence 3718 BP; 842 A; 1195 C; 1046 G; 635 T; 0 other;
ab041961 Length: 3718 02-NOV-2009 Type: N Check: 4112 ..
1 taattatgca aagtaggcgg agacagcaac cacgcccaac cacgcctact
51 ttgaataatg catgttaatg agcaaaaggg gaagtctctc tcattggttc
101 gtttaaaaaa cgtcaccgag cgggaaactc cgggggcgtg gtccactaaa
151 aggggaagtt ctcctcattg gtccgctaaa cagccaatag gaaagcgacc
201 cccagaatca cctaatctgc attgacgtgt ttccttccgc ttttcgggag
251 aggatataag caagtgcact gacgaatggc tgagtttacc gtgccgggga
301 gcagcgtctg ccgagcggag cgaggcgcga ccgagcgact gggcgggagc
351 cgggaacatc cgaaggtatg tggacgtcta ggggcaattc gggcaggagc
401 acccggcgca acgggcaagg ctcttaaaaa cgcttgtccc tcttcatccc
451 catacagtgc gatgggagac tggttcatgc agggcagccc cccggacttc
501 gcggtccagg aggacagatg gctcaaggcc gttgagagct gccaccagct
551 gttctgcagc tgctccagcg cctgggacca cctgaggaac atcctgcaga
601 cccgcggata ctggccccag ggaccaccac cgtaccgatc ggaaccccac
651 acggagcact cccgtccgcc ccctcctaaa aagcggaggc catggtgtgg
701 aggcgacggt ggtggagacg ccggcgccgg cccgtctggc gtcgccggta
751 ccgccgctgg aggcgccgga ggcgatggcg ccgtcggccc cgtagaagaa
801 gacgacccta ccgtcgccga ccttatcgcc gctatggaag aagacgaaag
851 gtgaggagga gacgcagacg gactctagtc gtcagacaat ttcagccccc
901 ttaccagaga cgctgtaggg tgtccggact cgaacccctc ctttactttg
951 gcaaaaagga ggaggagaga cacttctacg gtaacagaca gataatgaag
1001 gacgttgatc agacggaggg gggcggggtg acggacggag tgttctccct
1051 ggaggagctc tacgagagct accaggaggg ctggaaccac tggtcggcca
1101 gcaaccagat gcttcccctg gttcggtact tcgggtgtaa aatcaccctg
1151 tatcgctcgg cgacagacag ctacatcttc tggtggacta acaggccgcc
1201 gttccaagta gacagacagt tctgggtggg catgcatcct tactggatgc
1251 tccgcagagg tcgcaaggtg gtcatgctaa gtaaacaact aaaacccttt
1301 gcaaaagacc acgtcaccat caagatagga ccgcccgccc tcatgaaaac
1351 taagtggtac tttgccaggg acttctgcaa aacctggctg ctccagtgga
1401 gagcctgttt ctttaacccc atagatcctt atatccccag aggcgccaat
1451 aacaccaccg ttaccttcta tggctttccc ggacactcgt acccctcgca
1501 gagcctatac tatacgtggc aagaacatct tgcagaaaca aacgtttggg
1551 gaatcaccaa cgaatctgaa aagacaaaat ttgaggccct ccgaaaagct
1601 tggaacgagc aggccaccaa aggtcccgta gcgggttaca aagcggtcct
1651 acaggccatg aacgcctggg ctagcgttgc cgccccaggt ccagagggtt
1701 ccaactttgc caaagggacc aacgtggctc taggcctcgc caacctgctg
1751 tggctaatat actcccagta ctactggcaa aatagatccc ccagcccctg
1801 gggcctgcca ggtgccaccc tggaggccat gaaacacccg gaggcctgga
1851 agccgtacgc ctacaaatac agctggtctc acgataaagg caagggcaac
1901 agattcgcca tatgcgactg gccctacaaa gaccagcacg gagagcagac
1951 cactccgtta aactttgacc tggaaataaa ggacgcccct ctatggtggt
2001 gcgtaaccgc ggcgtacgac tgggccatca ggcagggcaa aaacccggcc
2051 aactggagct ttttcgtccg ctccgattat acctggccgc gggccgacaa
2101 catcatcttg gcctactcaa gctactttgc agacaacgta gttaaaaata
2151 agtatgccga cccacaacat gccacgggcg gctactttac cctatacaga
2201 gcccctaacc tcattgacgg cagggaggcc atagatatca tttaccgtaa
2251 cggtcctttc gctcctaaac aggaggagag caccggtaac gccactatca
2301 agtaccgctt ctactttaaa tggggcggca ctcagagacc gcccaggccc
2351 cagcccacag atccttgcca gcaaccaagg tgggagggac ctaacttccc
2401 tccgttcgat ggccgagctc gcatcgataa tccgtccgac caagaccccc
2451 ggtcgtactt ctggccgttc gacacccggc gcggctcact taccgcctcc
2501 gctgtcgacc gggttaagcg atctcttgat gctgttacag agccctcaga
2551 aacccggctc cgggagggcg aggagacgta cggtctgccg cccccggaga
2601 agcgggcccg atggggattt ccgtccatcc tcccgacgga gaaccccacg
2651 gacgaggacg agcgatacct cgaggcggag gcggacacca gcagctccga
2701 cgcgacggac ggtgtgccgg agacgccctt cgagctcctc caacacatcc
2751 agcgggaccg cgacaagcgg cgagagctcc gaggcagact ggcgagactc
2801 atcctccgcc tccgacgacg acaggatccc gagctccaaa actactaccc
2851 ttaaagcccg ctaaacttac gttctggccg gaggactggg acactaaacc
2901 ggtcaccccc ggccgcatca cgggccccga gctcctccta gagctggagg
2951 tggcccgggc ttttaaacgg ttccctcgca cccaccgcca agacgccccc
3001 acctataagt ggctcaacaa gagccgtccc tctcagccca tctcctacaa
3051 agtgtgcttc gatctgtatc caaataaaat ctaactgtgg ccatcagtac
3101 gactctccgt tggcctggga cgtttagtaa agtctgaccc cccccttggg
3151 gcgcccccta gaggtcgcac caccggcgag ttctccctag ggcgcccggc
3201 ctgcggccgg ggggccggct cggcaggcgc tgcgcgcctg ccgctcgccg
3251 gagcaattcg cggctcgcag gctcgccgcg cttttcacgt ggcccgcgca
3301 gcctctcacc tcacccgtgg gcgcgcaagg cgcgcccccg ggatcgcagt
3351 ctcgacagca cctagaatcg agcacggcgc gcgcaacgcg cgcgccgtac
3401 gtcgcgcgct gcgctaggct tcccgccacc gatcggctcg cttcgctcgc
3451 cgctcggctg gccttaattt gctaaaggaa ctccgagacg ccattggaca
3501 ctggggcagg tgaaccgcct gagggtcgca ccaagacgct cgctgacagc
3551 ggcccccttc gggggccctg tcccacgctc gctcctaacg tatcagtgga
3601 gcgagcgcga tccgaaaccg aaagtgcaaa aagaggaagg aaaggggggg
3651 cgttgccccc ccttcaaccc cccggcgggg gggccgagcc ccccctgcac
3701 ccccccggac tccgcccc