Sequence of DPV Torque teno mini virus 5
Torque teno mini virus 5 DNA, complete genome, isolate: TGP96.
ACC No: AB041962
Dated: 2009-11-02 | Length: 2908 | CRC: -2138428197
ID AB041962; SV 1; circular; genomic DNA; STD; VRL; 2908 BP.
XX
AC AB041962;
XX
DT 15-DEC-2000 (Rel. 66, Created)
DT 02-NOV-2009 (Rel. 102, Last updated, Version 4)
XX
DE Torque teno mini virus 5 DNA, complete genome, isolate: TGP96.
XX
KW .
XX
OS Torque teno mini virus 5
OC Viruses; ssDNA viruses; Anelloviridae; Betatorquevirus.
XX
RN [1]
RP 1-2908
RA Okamoto H.;
RT ;
RL Submitted (19-APR-2000) to the EMBL/GenBank/DDBJ databases.
RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and
RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi,
RL Kawachi-Gun, Tochigi 329-0498, Japan
XX
RN [2]
RX DOI; 10.1006/viro.2000.0588.
RX PUBMED; 11080484.
RA Okamoto H., Nishizawa T., Tawara A., Peng Y., Takahashi M., Kishimoto J.,
RA Tanaka T., Miyakawa Y., Mayumi M.;
RT "Species-specific TT viruses in humans and nonhuman primates and their
RT phylogenetic relatedness";
RL Virology 277(2):368-378(2000).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2908
FT /organism="Torque teno mini virus 5"
FT /host="Homo sapiens"
FT /isolate="TGP96"
FT /mol_type="genomic DNA"
FT /note="originally submitted as 'Torque teno virus'"
FT /note="synonym: TT virus"
FT /db_xref="taxon:687373"
FT CDS 340. .639
FT /codon_start=1
FT /transl_table=1
FT /note="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:Q9DUB5"
FT /protein_id="BAB19322.1"
FT /translation="MSSCYKPTYYNTKGKQTQWINDIHCTHDLWCSCDHVLKHLLLSIA
FT ERNEKIELTKEEKKQVLQCLTTTEEITTQNGDDGDLDEIGLDAIFAEELTEDAG"
FT CDS 528. .2543
FT /codon_start=1
FT /transl_table=1
FT /note="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:Q9DUB4"
FT /protein_id="BAB19323.1"
FT /translation="MPYYYRRNYYPKWRRWRSRRNRFRRHFRRRTYRRRWVSNPFNKIT
FT LKQWQPPYKKTCYIKGQTCLIYYNNDRLGYNSTMYEKSIVPFHWPGGGSFSVSKYTLDG
FT LFDMHKECRNWWTGSNIDLPLCKYKGCTLTFYQAQNTDFIFKVTNEQPAVSNKLTYPST
FT HPQIMLMSNQHHVLSSTQNRKKRKPYTKIHIPPPEMFENKWYFTQDLFRIPLLQIFATA
FT ANMPNPYLKPNRKSNNTVFWGINTQSTQNREMSIETDQSWPFKKQGTQSFYFYYYTGTN
FT PPSDTSQIKVADIIAVTDKKNNKPGESYHDQQTTSNKNWQQYFENYQQFWGNPFNNHLN
FT EHPEYFYYSFISPETLKATAKTKTDQMTWKDLTDTNQSYALTKFDEPIFIPYQYNPERD
FT TGEDTQCYFLSNREGHGWDPPGVPEIILEGFPLWLILWGYADFQKNLKKILNIDTTYIL
FT TIKSKFAQRPRTYPIVIIDESFKQGFSPYEQTCLPEDITRWYPMYQYQTREQNKILQTG
FT PFTPYIQNLQSENLCMYYKFRFQWGGSPPKTVNVENPSHQNIFPIPRNEHETTSLQSPG
FT TAPESILYSFDFRHGDYTTKALARITKDWPIKETVSQITEPESAKLLQQMFQFLQTSEE
FT TQEKKEKEMHQYIQLLRQQQQQYRERIASILNHQQL"
FT CDS 2176. .2514
FT /codon_start=1
FT /transl_table=1
FT /note="ORF3"
FT /db_xref="InterPro:IPR008474"
FT /db_xref="UniProtKB/TrEMBL:Q9DUB3"
FT /protein_id="BAB19324.1"
FT /translation="MLKILPTRISFLYPVTSMKQLRYRVQGQPPKASYTHLTSDMETTQ
FT QKLLQELQRTGQLKKLFLKLQNQSQQNYSNKCSSFSKHQKKRRRKKKKRCTSTSNSSDN
FT SSSSTESE"
FT repeat_region 2830. .2908
FT /rpt_unit_seq="GC"
XX
SQ Sequence 2908 BP; 1158 A; 636 C; 443 G; 671 T; 0 other;
ab041962 Length: 2908 02-NOV-2009 Type: N Check: 1868 ..
1 taataaatat tcaacaggaa aaccacctaa tttaaattgc cgaccacaaa
51 ccgtctctta cttcctcttt ttactaatac ttcccttttt gctcattatt
101 attcattaca ttaattagta atctccgtaa ttccggggag gggccaacaa
151 actatataac caagtacact tccgaatggc tgagtttatg ccgccagacg
201 gagacgggat cacttcagtg actccaggct gaacttgggc gggagccgaa
251 ggtgagtgaa accaccgtag tctaggggca attcgggcta gttcagtctg
301 gcggaacggg caagaaactt aaaatattat attttacaga tgtcaagctg
351 ttataaacca acatactata acacaaaagg caaacaaact caatggatta
401 acgatattca ctgcacccac gatttatggt gttcctgtga ccacgtactc
451 aaacatctcc tactaagcat tgctgaaaga aacgaaaaaa ttgaattaac
501 caaagaagaa aagaaacaag tactacaatg ccttactact acagaagaaa
551 ttactaccca aaatggagac gatggagatc tagacgaaat aggtttagac
601 gccattttcg cagaagaact taccgaagac gctgggtaag caaccctttt
651 aacaaaataa ctttaaaaca atggcaaccg ccatataaaa agacttgcta
701 cataaaagga caaacttgtt taatatatta taacaatgac agacttggat
751 ataacagtac aatgtatgaa aaaagtattg taccttttca ttggccggga
801 gggggaagct tttctgtaag caaatatact ttagatggat tatttgatat
851 gcataaagaa tgtagaaact ggtggacagg cagtaatata gatttaccat
901 tatgtaaata taaaggatgt acattaactt tttaccaagc acaaaataca
951 gactttatat ttaaagtaac aaatgaacag ccagcagtaa gcaacaaatt
1001 aacatatcct agcacacatc cacaaataat gctaatgagc aaccaacacc
1051 atgtactatc atccacacaa aacagaaaga aaagaaaacc atacacaaaa
1101 atacacatac caccaccaga aatgtttgaa aacaaatggt attttacaca
1151 agacttattt agaataccac tactacaaat atttgcaact gcagcaaaca
1201 tgccaaaccc atacttaaaa cctaacagaa aatcaaacaa cacagtgttt
1251 tggggaataa acacacaaag tacacaaaac agagaaatgt caatagaaac
1301 agaccaatca tggcctttta aaaagcaagg cacacaatcc ttttactttt
1351 actactacac tggcacaaac ccaccatcag acacaagtca aattaaagta
1401 gcagacataa tagcagtaac agacaaaaaa aacaacaaac caggagaaag
1451 ctaccatgac caacaaacaa catcaaacaa aaattggcaa caatactttg
1501 aaaattacca acaattttgg ggaaatccat ttaacaatca cttaaatgaa
1551 catccagaat acttttatta ctcttttata tcaccagaaa ctctaaaagc
1601 aactgcaaaa acaaaaacag accaaatgac ttggaaagac ttaacagaca
1651 caaaccaatc atatgcctta actaaatttg atgaaccaat attcatccca
1701 taccaatata acccagaaag ggacacagga gaagacacac aatgctactt
1751 tttaagtaac agagaaggcc acggatggga cccacccggt gttccagaaa
1801 ttatattaga aggctttcct ttgtggctaa tattatgggg atacgcagac
1851 tttcaaaaaa acttaaaaaa gatacttaac atagacacaa catatatact
1901 caccattaaa tcaaaatttg cacaaaggcc tagaacatat cctatagtaa
1951 ttatagatga atcatttaaa caaggattta gtccatacga acaaacatgc
2001 ttaccagaag acataactag atggtatcca atgtaccaat accaaacaag
2051 agaacaaaac aaaatactac aaacaggacc attcacacca tacatacaaa
2101 acctacaatc tgaaaattta tgtatgtact ataaatttag attccaatgg
2151 ggaggaagcc cacctaaaac agtaaatgtt gaaaatcctt cccaccagaa
2201 tatctttcct ataccccgta acgagcatga aacaacttcg ttacagagtc
2251 cagggacagc ccccgaaagc atcctatact catttgactt cagacatgga
2301 gactacacaa caaaagctct tgcaagaatt acaaaggact ggccaattaa
2351 agaaactgtt tctcaaatta cagaaccaga gtcagcaaaa ctactccaac
2401 aaatgttcca gtttctccaa acatcagaag aaacgcagga gaaaaaagaa
2451 aaagagatgc accagtacat ccaactcctc agacaacagc agcagcagta
2501 cagagagcga atagcatcaa tattaaacca ccaacaatta taggatgtat
2551 taaaagggtt aaactgtttg atgataacaa atgtaaaaat cgccgcttta
2601 cccctgaaga atttcaaact gaattagaaa tatgtaaatg gatgaaaaga
2651 ccccctagat attatgtaca tgatccaccc ttttacccct ggactgtacc
2701 agaacctaaa gtaaactttg ctcttaattt caaagaataa aggccagcat
2751 taattcactt agtggtgtca gtttatatta tttaaactta aataaacagt
2801 caccgcctcc ctaatacgca ggcgcacaag ggggctccgc ccccttaaac
2851 ccccaagggg gctccgcccc cttaaacccc caagggggct ccgccccctt
2901 aaaccccc