Sequence of DPV Melon necrotic spot virus
Melon necrotic spot virus genes for p29, p89, p7A, p7B, p14, p42 coat protein, complete cds, isolate:NH.
ACC No: AB044291
Dated: 2005-04-14 | Length: 3992 | CRC: 1555948658
!!NA_SEQUENCE 1.0
ID AB044291 standard; genomic RNA; VRL; 3992 BP.
XX
AC AB044291;
XX
SV AB044291.2
XX
DT 10-JAN-2002 (Rel. 70, Created)
DT 14-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Melon necrotic spot virus genes for p29, p89, p7A, p7B, p14, p42 coat
DE protein, complete cds, isolate:NH.
XX
KW .
XX
OS Melon necrotic spot virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Carmovirus.
XX
RN [1]
RP 1-3992
RA Ohshima K.;
RT ;
RL Submitted (05-JUN-2000) to the EMBL/GenBank/DDBJ databases.
RL Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL Plant Virology; 1-banchi,Honjo-machi, Saga, Saga, 840-8502, Japan
RL (E-mail:Ohshimak@cc.saga-u.ac.jp, Tel:0952-28-8730, Fax:0952-28-8709)
XX
RN [2]
RA Ohshima K., Ando T., Motomura N., Matsuo K., Sako N.;
RT "Nucleotide sequences of protein genes of two Japanese melon necrotic spot
RT virus isolates";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3992
FT /country="Japan"
FT /db_xref="taxon:11987"
FT /mol_type="genomic RNA"
FT /organism="Melon necrotic spot virus"
FT /isolate="NH"
FT CDS 93. .2468
FT /codon_start=1
FT /db_xref="GOA:Q8V996"
FT /db_xref="InterPro:IPR002166"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR007095"
FT /db_xref="UniProt/TrEMBL:Q8V996"
FT /note="The readthrough amino acid has not been identified"
FT /note="readthrough product"
FT /transl_except=(pos:897. .899,aa:OTHER)
FT /product="p89"
FT /protein_id="BAB82507.1"
FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW
FT TSAISHDCSKIAKVATVIGIGYLGVRIGAAWCRRAPGITNSIITYGEEVVEQVKVDIDE
FT EAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS
FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVLSPDMYDISSKALLNSEILTENR
FT ATLDRLKTLDGWLSHLVCHPLSTKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS
FT VRRGTHPDMTEFPQDRPIKTRKLYCLGGVGTSVKFNVHNNSLANLRRGLIERVFFVEND
FT KKELEPAPKPLSGVFDRLTWFRRKLHNIVGTHSSISPGKSLDFYTGRRRTIYEGAVKSL
FT EGLSVQRRDAYLKTFVKAEKINTTKKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRG
FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRVRPHVSSDALKWEHSVY
FT LDALGHDSYLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH
FT DFFRSRGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEVFEQIE
FT FCQMRPVYDGEKYVMVRNPLVSLSKDSYSVGPWNGVNHARKWVNAVGLCGLSLTGGIPV
FT VQSYYNMMIRNTQSVNSSGILRDVSFASGFRELARLGNRKSGAISEDARFSFYLAFGIT
FT PDLQRAMESDYDAHTIEWGFVPQGNPRIQPISWTLNEL"
FT CDS 93. .899
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q8V995"
FT /product="p29"
FT /protein_id="BAB82508.1"
FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW
FT TSAISHDCSKIAKVATVIGIGYLGVRIGAAWCRRAPGITNSIITYGEEVVEQVKVDIDE
FT EAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS
FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVLSPDMYDISSKALLNSEILTENR
FT ATLDRLKTLDGWLSHLVCHPLSTKAWRRAIDNLCGLPDWKAFKLVN"
FT CDS 2447. .2833
FT /codon_start=1
FT /db_xref="GOA:Q8V994"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="InterPro:IPR009575"
FT /db_xref="UniProt/TrEMBL:Q8V994"
FT /note="The readthrough amino acid has not been identified"
FT /note="readthrough product"
FT /transl_except=(pos:2642. .2644,aa:OTHER)
FT /product="p14"
FT /protein_id="BAB82509.1"
FT /translation="MDSQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAISESKQG
FT VMGASTYIADKIKVTINFNFXCMACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGN
FT TYVHHFDNSSVKTQYVGISTNGDG"
FT CDS 2447. .2644
FT /codon_start=1
FT /db_xref="GOA:Q8V993"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="UniProt/TrEMBL:Q8V993"
FT /product="p7A"
FT /protein_id="BAB82510.1"
FT /translation="MDSQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAISESKQG
FT VMGASTYIADKIKVTINFNF"
FT CDS 2648. .2833
FT /codon_start=1
FT /db_xref="InterPro:IPR009575"
FT /db_xref="UniProt/TrEMBL:Q8UYH9"
FT /product="p7B"
FT /protein_id="BAB82511.1"
FT /translation="MACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGNTYVHHFDN
FT SSVKTQYVGISTNGDG"
FT CDS 2820. .3992
FT /codon_start=1
FT /db_xref="GOA:Q83427"
FT /db_xref="HSSP:2TBV"
FT /db_xref="InterPro:IPR000937"
FT /db_xref="UniProt/TrEMBL:Q83427"
FT /product="p42 coat protein"
FT /protein_id="BAB82512.1"
FT /translation="MAMVKRINNLPTVKLAKQALPLLTNPKIVNKAIDVVPLVVQGGQK
FT LSKAAKRLLGAYGGNISYTEGARPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI
FT ASVLPSNDLTVNNGDVNIGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS
FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSTPWAENVLVVPCDNTWRYMNDTNAV
FT DRKLVDFGQFLFATYSGAGATAHGDLYVEYAVEFKDPQPIAGMVCMFDRLVSFSEVGST
FT IKGVNYIADRDVITTGGNISVNINIPGTYLVTIVLNATSIGSLTFTGNSKLVGNSLNVT
FT SSGASALTFTLNSTGVPNSTNSSFSVGTVVALTRVRMTITRCSPETAYLA"
XX
SQ Sequence 3992 BP; 1025 A; 823 C; 989 G; 1155 T; 0 other;
AB044291 Length: 3992 April 19, 2005 08:56 Type: N Check: 4023 ..
1 tttgttcttt ccacggatcc ccgacttctt cggttttgac agttagttag
51 ttcgtatata aggttatcca tcttaatcaa tacaggttag caatggatac
101 tggtttgaaa tttcttgttt ctggaggttt agccacctca tctgttatta
151 ggaaagtgag tgctgtgagt tcattggatt cgtcccttcc ttcatcgtct
201 atactatctg ccattcatgg gtcttggact agtgctatca gccacgattg
251 tagcaagatt gccaaggttg ccaccgtgat tggaattggt tatcttgggg
301 ttcgaattgg tgccgcatgg tgtcgtcgtg cccccggaat aacgaattct
351 ataattacat acggggaaga agtggttgag caagtaaagg tggatattga
401 tgaagaagct gaagaggagt ccgatactgg tgaggaaatt gtggttggca
451 cgataggtat tggtatacac actaacgtca accctgaggt tcgagctaag
501 cgcagacata gatcgaggcc attcattaag aagattgtga atttaacgaa
551 aaatcacttt ggtggatgcc ccgattcaag taaatcgaac gtcatggctg
601 ttagcaagtt tgtttatgaa caatgtaaac agcacaattg tcttccacat
651 cagacgagat tgatcatgag tgttgcagtt ccattggtgt taagtcccga
701 catgtacgat atttccagta aagctctgtt aaacagcgag atattgacag
751 aaaacagagc tacactggac cgcctcaaaa ctcttgacgg gtggctgtca
801 catttagtgt gccaccccct tagcacgaag gcttggaggc gggcgattga
851 caacttatgt ggtcttcctg attggaaggc cttcaagttg gtcaactagg
901 ggtgcctaga ggaactcgct gggttctgta cttcggtacg gagggggacg
951 cacccagaca tgaccgagtt tcctcaggat cgtcccatta agacacgcaa
1001 actgtattgt ttggggggag ttggaactag cgtgaagttc aatgtacaca
1051 ataactctct agctaacctt cggcgcggtc ttatagaacg cgttttcttt
1101 gttgaaaatg ataagaagga actagagcct gcccctaaac cccttagtgg
1151 tgtgtttgac cgcttaacct ggtttcgtcg gaaactccat aacattgtgg
1201 gtactcattc cagtattagt ccaggtaaat ccttggattt ctatactggc
1251 aggaggcgta caatctatga gggtgccgtg aagtcattgg aggggttaag
1301 tgttcaaaga agggatgcct atttgaaaac gtttgttaag gcggagaaga
1351 ttaacaccac taagaagcct gacccagctc cgcgggtcat acaaccgagg
1401 aacgtaagat acaatgttga ggttggtcgt tatctacgta ggtttgagca
1451 ttacctctat cgaggaattg atgaaatctg gaatggcccc actataatta
1501 aaggatacac tgtcgagcaa attgggaaaa tcgctcgtga tgcttgggac
1551 tctttcgtga gccccgtggc aatcgggttt gatatgaaga gggtccgacc
1601 acatgtatcc tccgacgctc ttaaatggga acacagtgtt tatcttgatg
1651 ctttgggcca tgattcttat cttgcagaat tgttggagtg gcaattagtc
1701 aataaaggag tcgggtatgc cagtgacgga atgatcaaat ataaggttga
1751 tgggtgccgg atgagtggtg acatgaatac agctatgggt aactgtctga
1801 ttgcctgtgc tatcacacat gatttcttcc gtagtcgtgg tatcagggcg
1851 cgtttgatga acaatggtga tgactgtgtc gtaatatgtg aaaaagaatg
1901 tgccgcggtg gttaaagccg acatggtaag gcactggaga caattcgggt
1951 ttcaatgcga gctcgaatgc gacgcagaag tcttcgagca aattgagttt
2001 tgtcaaatgc gacctgtgta cgacggggaa aaatatgtga tggtgcggaa
2051 tccgctagtt agcctgtcta aagattcata ctcagtcggc ccatggaatg
2101 gagtcaacca tgcacgcaag tgggtaaatg ccgtaggctt gtgtggctta
2151 tccctcactg gtggaattcc tgttgtccag agttactata atatgatgat
2201 tcgtaacact caatccgtga acagttctgg cattctccgg gatgtcagtt
2251 ttgctagtgg atttcgggag ttagcgcgat tgggtaacag gaaaagtggt
2301 gccatatcag aagacgcccg ttttagcttt tatctcgcat ttggcattac
2351 tccagattta caacgtgcca tggaaagtga ctatgatgct cataccatag
2401 agtggggttt cgtgccccag ggaaatccta gaatacagcc aatctcatgg
2451 actctcaacg aactgtagaa caaactaatc ctcggggaag aagtaaagaa
2501 cgtggtgaca gcgggggaaa acagaagaac tcaatggggc gaaagatagc
2551 caatgatgct atctctgaat cgaagcaggg agttatgggt gctagcacat
2601 atattgctga taaaattaag gtgactatca actttaattt ttagtgtatg
2651 gcttgttacc gttgtgactc cagccccggg gattactctg gagctttgct
2701 tatattattt atctcatttg ttttcttcta tattacctcg cttagcccgc
2751 aaggaaatac ttacgttcac cacttcgata attcttccgt taaaacgcaa
2801 tacgttggca tctctacaaa tggcgatggt taaacgcatt aataatttac
2851 caacagtgaa gcttgctaag caggccttgc ccctgttaac gaatcctaaa
2901 attgtgaata aggctataga tgtggttcct ttggtcgtcc aaggtggtca
2951 gaaattgtcc aaagctgcca agcggctgct tggcgcttat ggtggtaata
3001 tttcttacac tgagggtgct agacctggtg caatatccgc tccagttgcc
3051 attagtaggc gagtggcggg tatgaagcct aggtttgttc gatccgaagg
3101 atcagtgaag atagttcata gggagttcat tgcctctgtt cttccgtcaa
3151 atgatctcac cgtgaacaat ggtgatgtca atatcggtaa gtatagggtc
3201 aatcccagta ataacgcttt attcacatgg cttcagggac aagcgcaatt
3251 atatgatatg tacagattta ctcgactacg atttacctat attccaacca
3301 ccggatccac ttctacaggt cgtgtttcta ttctttggga tagagactct
3351 caggatcccc tccctattga ccgcgccgct attagttctt atgctcatta
3401 cgctgattca acgccttggg cagagaacgt tttagtggtt ccgtgtgaca
3451 atacgtggag gtacatgaat gataccaacg cagtggaccg gaagttggtt
3501 gattttgggc agttcctctt tgctacctat tctggtgctg gtgccaccgc
3551 ccacggtgat ctctacgttg agtatgctgt ggaattcaaa gatccccagc
3601 ctattgctgg aatggtttgt atgtttgatc gcttggtctc tttctctgaa
3651 gtcggatcca caattaaagg agtcaattat attgctgatc gtgatgtgat
3701 aaccactggg ggcaatatta gtgtcaacat caatattccc gggacttatc
3751 tcgttacgat tgttcttaac gctacatcaa ttggctccct taccttcact
3801 ggtaattcta aactcgtagg caatagtctt aacgtcacca gcagtggcgc
3851 ttcagctctt acattcaccc ttaattccac tggtgtgccc aacagtacta
3901 attcttcatt ttccgtgggc accgttgttg cattgaccag ggttcgtatg
3951 acgattactc gctgctctcc tgaaaccgcc tacctcgcct ag