Sequence of DPV Melon necrotic spot virus
Melon necrotic spot virus genes for p29, p89, p7A, p7B, p14, p42 coat protein, complete cds, isolate:NK.
ACC No: AB044292
Dated: 2005-04-14 | Length: 4046 | CRC: 479389461
!!NA_SEQUENCE 1.0
ID AB044292 standard; genomic RNA; VRL; 4046 BP.
XX
AC AB044292;
XX
SV AB044292.2
XX
DT 10-JAN-2002 (Rel. 70, Created)
DT 14-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Melon necrotic spot virus genes for p29, p89, p7A, p7B, p14, p42 coat
DE protein, complete cds, isolate:NK.
XX
KW .
XX
OS Melon necrotic spot virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Carmovirus.
XX
RN [1]
RP 1-4046
RA Ohshima K.;
RT ;
RL Submitted (05-JUN-2000) to the EMBL/GenBank/DDBJ databases.
RL Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL Plant Virology; 1-banchi,Honjo-machi, Saga, Saga, 840-8502, Japan
RL (E-mail:Ohshimak@cc.saga-u.ac.jp, Tel:0952-28-8730, Fax:0952-28-8709)
XX
RN [2]
RA Ohshima K., Ando T., Motomura N., Matsuo K., Sako N.;
RT "Nucleotide sequences of protein genes of two Japanese melon necrotic spot
RT virus isolates";
RL Unpublished.
XX
RN [3]
RA Ohshima K., Tsuyu A., Motomura N., Matsuo K., Sako N.;
RT "Nucleotide sequences of protein genes of two Japanese melon necrotic spot
RT virus isolates";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4046
FT /country="Japan"
FT /db_xref="taxon:11987"
FT /mol_type="genomic RNA"
FT /organism="Melon necrotic spot virus"
FT /isolate="NK"
FT CDS 93. .2468
FT /codon_start=1
FT /db_xref="GOA:Q8V992"
FT /db_xref="InterPro:IPR002166"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR007095"
FT /db_xref="UniProt/TrEMBL:Q8V992"
FT /note="The readthrough amino acid has not been identified"
FT /note="readthrough product"
FT /transl_except=(pos:897. .899,aa:OTHER)
FT /product="p89"
FT /protein_id="BAB82513.1"
FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW
FT TSAISHDCSKIAKVATVIGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE
FT DAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS
FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVFNPDMYDISSKALLNSEILTENR
FT ATLDRLKTLDGWLSHLVCHPLSTKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS
FT VRRGTHPDMTEFPQDRPIKTRKLYCLGGVGTSVKFNVHNNSLANLRRGLIERVFFVEND
FT KKDLEPAPKPLSGVFDRLTWFRRKLHNIVGTHSSISPGQFLDFYTGRRRTIYEGAVKSL
FT EGLSVQRRDAYLKTFVKAEKINTTRKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRR
FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSSDALKWEHSVY
FT LDAFCHDSYLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH
FT DFFRSPGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEVFEQIE
FT FCQMRPVYDGEKYVMVRNPLVSLSKDSYSVGPWNGVNHARKWVNAVGLCGLSLTGGIPV
FT VQSYYNMMIRNTQSVNSSGILRDVSFASGFRELARLGNRKNGAISEDARFSFYLAFGIT
FT PDLQRAMESDYDAHTIEWGFVPQGNPRIQPISWTLNEL"
FT CDS 93. .899
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q8V991"
FT /product="p29"
FT /protein_id="BAB82514.1"
FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW
FT TSAISHDCSKIAKVATVIGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE
FT DAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS
FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVFNPDMYDISSKALLNSEILTENR
FT ATLDRLKTLDGWLSHLVCHPLSTKAWRRAIDNLCGLPDWKAFKLVN"
FT CDS 2447. .2833
FT /codon_start=1
FT /db_xref="GOA:Q8V990"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="InterPro:IPR009575"
FT /db_xref="UniProt/TrEMBL:Q8V990"
FT /note="The readthrough amino acid has not been identified"
FT /note="readthrough product"
FT /transl_except=(pos:2642. .2644,aa:OTHER)
FT /product="p14"
FT /protein_id="BAB82515.1"
FT /translation="MDSQRTVEQTNPRGRIKERGDSGGKQKNSMGRKIANDAISESKQG
FT VMGASTYIADKIKVTINFNFXCMACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGN
FT TYVHHFDNSSVKTQYVGISTNGDG"
FT CDS 2447. .2644
FT /codon_start=1
FT /db_xref="GOA:Q8V989"
FT /db_xref="InterPro:IPR007982"
FT /db_xref="UniProt/TrEMBL:Q8V989"
FT /product="p7A"
FT /protein_id="BAB82516.1"
FT /translation="MDSQRTVEQTNPRGRIKERGDSGGKQKNSMGRKIANDAISESKQG
FT VMGASTYIADKIKVTINFNF"
FT CDS 2648. .2833
FT /codon_start=1
FT /db_xref="InterPro:IPR009575"
FT /db_xref="UniProt/TrEMBL:Q8UYH9"
FT /product="p7B"
FT /protein_id="BAB82517.1"
FT /translation="MACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGNTYVHHFDN
FT SSVKTQYVGISTNGDG"
FT CDS 2820. .3992
FT /codon_start=1
FT /db_xref="GOA:Q8V988"
FT /db_xref="HSSP:2TBV"
FT /db_xref="InterPro:IPR000937"
FT /db_xref="UniProt/TrEMBL:Q8V988"
FT /product="p42 coat protein"
FT /protein_id="BAB82518.1"
FT /translation="MAMVKRINNLPTVKLAKQALPLLTNPKLVNKAIDVVPLVVQGGQK
FT LSKAAKRLLGAYGGNISYTEGAKPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI
FT ASVLPSNDLTVNNGDVNIGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS
FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSAPWAENVLVVPCDNTWRYMNDTNAV
FT DRKLVDFGQFLFATYSGAGATAHGDLYVEYAVEFKDPQPIAGMVCMFDRLVSFSEVGST
FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNVTSIGSLTFTGNSKLVGNSLNVT
FT SSGASALTFTLNSTGVPNSTNSSFSVGTVVALTRVRMTITRCSPETAYLA"
XX
SQ Sequence 4046 BP; 1030 A; 842 C; 988 G; 1186 T; 0 other;
AB044292 Length: 4046 April 19, 2005 08:53 Type: N Check: 3778 ..
1 tttgttcttt ccacggatcc ccgacttctt cggttttgac agttagttag
51 ttcgtatata aggttatctc tcttaatcaa tacaggttag caatggatac
101 tggtttgaaa tttcttgttt ctggaggttt agccacctca tctgttatta
151 ggaaagtgag tgctgtgagt tcattggatt cgtcccttcc ttcatcgtct
201 atactatctg ccattcatgg gtcttggact agtgctatca gccacgattg
251 tagcaagatt gccaaggttg ccaccgtgat tggaattggt tatcttgggg
301 ttcggattgg tgccgcatgg tgtcgtcgta cccccgggat aacgaattct
351 ataattacat acggggaaga agtggttgag caagtaaagg tggatattga
401 tgaagatgct gaagaggagt ccgatactgg tgaggaaatt gtggttggca
451 cgataggtat tggcatacac actaacgtca accctgaggt tcgagctaag
501 cgcagacata gatcgaggcc attcattaag aagattgtga atttaacgaa
551 aaatcacttt ggtggatgtc ccgattcaag taaatcgaac gtcatggctg
601 ttagcaaatt tgtttatgaa caatgtaaac agcacaattg tcttccacat
651 cagacaagat tgatcatgag tgttgcggtt ccattggtgt ttaatcccga
701 catgtacgac atttccagta aagctctgtt aaacagcgag atattgacag
751 aaaacagagc tacgctggac cgcctcaaaa ctcttgacgg gtggctgtca
801 catttagtgt gccaccccct cagcacgaag gcttggaggc gggcgattga
851 caacttgtgt ggtcttcctg attggaaggc cttcaagttg gtcaactagg
901 ggtgcctaga ggaactcgct gggttctgta cttcggtacg gagggggacg
951 cacccagaca tgaccgagtt tcctcaggat cgtcccatta agacacgcaa
1001 actgtattgt ttggggggag ttggaactag cgttaagttc aatgtacaca
1051 ataactctct agctaacctt cggcgcggtc ttatagaacg cgttttcttt
1101 gttgaaaatg ataagaagga cctagagcct gcccccaaac cccttagtgg
1151 tgtgtttgac cgcttaacct ggtttcgtcg gaaactccat aacattgtgg
1201 gtactcattc cagtattagt ccaggtcaat tcttggattt ctatactggc
1251 aggaggcgta caatttatga aggtgccgtg aagtcattgg aggggttaag
1301 tgttcaaaga agggatgcct atttgaaaac gtttgttaag gcggagaaga
1351 ttaacaccac taggaagcct gacccagctc cgcgggtcat acaaccgagg
1401 aacgtaagat ataatgttga agttggtcgt tatctacgta ggtttgagca
1451 ttacctctat cgaagaattg atgaaatctg gaatggcccc actataatta
1501 aaggatacac tgtcgagcaa attgggaaaa ttgctcgtga tgcttgggac
1551 tctttcgtga gccccgtggc aatcgggttt gatatgaaga ggttcgacca
1601 acatgtatcc tccgacgctc ttaaatggga acacagtgtt taccttgatg
1651 ctttttgcca tgattcttat cttgcagaat tgttggagtg gcaattagtc
1701 aataaaggag tcgggtatgc cagtgatgga atgatcaaat ataaggttga
1751 tgggtgccgg atgagtggtg acatgaatac agctatgggt aactgtctga
1801 ttgcctgtgc tatcacacat gatttcttcc gtagtcctgg tatcagggcg
1851 cgtttgatga acaatggtga tgactgtgtc gtaatatgtg aaaaagaatg
1901 tgccgcggtg gttaaagccg acatggtaag gcactggaga caattcgggt
1951 ttcaatgcga gctcgagtgc gacgcagaag tcttcgagca aattgagttt
2001 tgtcaaatgc ggcctgtgta cgacggggaa aaatatgtga tggtgcggaa
2051 tccgctagtt agcctatcta aagattcata ctcagtcggc ccatggaatg
2101 gagtcaacca tgcacgcaag tgggtaaacg ctgtaggctt gtgtggctta
2151 tccctcactg gtggaattcc tgttgtccag agttactata atatgatgat
2201 tcgtaacact caatccgtga acagttctgg cattctccgg gatgtcagtt
2251 ttgctagtgg atttcgggag ttagcgcgat tgggtaacag gaaaaatggt
2301 gccatatcag aagacgcccg ttttagcttt tatctcgcat ttggcattac
2351 tccagattta caacgtgcca tggaaagtga ctatgatgct cataccatag
2401 agtggggttt cgtgccccag ggaaatccta gaatacagcc aatctcatgg
2451 actctcaacg aactgtagaa caaactaatc ctcggggaag aattaaagaa
2501 cgtggtgaca gcgggggaaa acagaagaac tcaatggggc gaaagatagc
2551 caatgatgct atctctgaat cgaagcaggg agttatgggt gctagcacat
2601 acattgctga caaaattaag gtgactatca actttaattt ttagtgtatg
2651 gcttgttacc gttgtgactc cagccccggg gattactctg gagctttgct
2701 tatattattt atctcatttg ttttcttcta cattacctcg cttagcccgc
2751 aaggaaatac ttacgttcac cacttcgata attcttccgt taaaacgcaa
2801 tacgttggca tctctacaaa tggcgatggt taaacgcatt aataatttac
2851 caacagtgaa gcttgctaag caggccctgc ccctgctaac gaatcctaaa
2901 cttgtgaata aggctataga tgtggttcct ttggtcgtcc aaggtggtca
2951 gaaattgtcc aaagctgcca agcggttgct tggcgcttat ggtggtaata
3001 tttcttacac tgagggcgcc aagcctggtg caatatccgc tccagttgcc
3051 attagtaggc gagtggcggg tatgaagcct aggtttgttc gatccgaagg
3101 atctgtgaag atagttcata gggagtttat tgcctctgtt cttccgtcga
3151 atgatctcac cgtgaataat ggtgatgtca atatcggtaa gtatagggtc
3201 aatcccagta ataacgcttt attcacatgg cttcagggac aagcgcaatt
3251 atatgatatg tacagattta ctcgactacg atttacctat attccaacca
3301 ccggatccac ttccacaggt cgtgtttcta ttctctggga tagagactcc
3351 caggatcccc tccctattga ccgcgccgct attagttctt atgctcatta
3401 cgctgattca gcgccttggg cagagaacgt cttagtggtt ccatgtgaca
3451 atacgtggag gtacatgaat gataccaatg cagtggaccg gaagttggtt
3501 gattttgggc agttcctttt tgctacttat tctggtgctg gtgccaccgc
3551 ccacggtgat ctctacgttg agtatgctgt tgaattcaaa gatccccagc
3601 ctattgctgg aatggtttgt atgtttgatc gcttggtctc tttctctgaa
3651 gtcggatcta caattaaagg agtcaattat attgctgatc gtgatgtgat
3701 aaccactggg ggcaatattg gtgttaacat caatattccc gggacttatc
3751 tcgtcacgat tgttcttaac gttacatcaa ttggctccct tactttcact
3801 ggtaattcta aactcgtagg caatagtctt aacgtcacca gcagtggcgc
3851 ttcagctctt acattcaccc ttaattccac tggtgtgccc aacagtacta
3901 attcttcatt ctctgtgggc accgttgttg cattgactag ggttcgtatg
3951 acgattactc gctgctctcc tgaaactgcc tacctcgcct agagatttaa
4001 ttcactatac tccaaaatcc ggtctccctt cttcctagct gttctc