Sequence of DPV Chinese yam necrotic mosaic virus
Chinese yam necrotic mosaic virus gene for polyprotein, partial cds.
ACC No: AB044386
Dated: 2007-08-18 | Length: 1905 | CRC: 518715876
ID AB044386; SV 1; linear; genomic RNA; STD; VRL; 1905 BP.
XX
AC AB044386;
XX
DT 31-JUL-2001 (Rel. 68, Created)
DT 18-AUG-2007 (Rel. 92, Last updated, Version 4)
XX
DE Chinese yam necrotic mosaic virus gene for polyprotein, partial cds.
XX
KW .
XX
OS Chinese yam necrotic mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae.
XX
RN [1]
RP 1-1905
RA Kondo T.;
RT ;
RL Submitted (07-JUN-2000) to the EMBL/GenBank/DDBJ databases.
RL Toru Kondo, Aomori Green BioCenter, Plant Disease Bio-control Division;
RL 221-10, Yamaguchi, Nogi, Aomori-shi, Aomori 030-0142, Japan
RL (E-mail:tkon@mm.neweb.ne.jp, Tel:81-177-281015, Fax:81-177-281017)
XX
RN [2]
RA Kondo T.;
RT "The 3'-terminal sequence of Chinese yam necrotic mosaic virus genomic RNA:
RT a close relationship with macluravirus";
RL Arch. Virol. 146:1527-1535(2001).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1905
FT /organism="Chinese yam necrotic mosaic virus"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:128818"
FT CDS <1. .1674
FT /codon_start=1
FT /transl_table=1
FT /product="polyprotein"
FT /note="partial NIb and complete coat protein"
FT /db_xref="GOA:Q91DH6"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="UniProtKB/TrEMBL:Q91DH6"
FT /protein_id="BAB62224.1"
FT /translation="FDILYSIRSNFFCEEDRQDAKTAMAHMYREFVYTPIHTITGQVLV
FT KKLGNNSGQPSTVVDNTLILMLSFLYAYIRKTNDRTCAQINQRFKFVCNGDDNKYSVSP
FT EFHEEFSGDFSREIAELGLTYEFDDLTADITQNPYMSLVMVRTPGGIGFQLNPERIIAI
FT VQWIKRGDVLQASQAAFAAMIEAFNDPWLFGVLHLYFVWLLCQYREEIRYAMDHDLGAV
FT CYMDAYQVYALHYDTRDDVNDLQIDSASCEIEKTVVVAGSTQHISLQMDLSTPVQLPTK
FT KPSVEDKGKALATPSTTATLPDSSQGHQPVEEPNNNPDTVDEEDIEWRIPAIQKGFGHY
FT KIPKVKGKRIWNPKILKKIAHEQFTTTSQMVTTDKLEKWTEEVKRDLVVTNETDFQICL
FT TSWCLWCANNGTSSELDASQFMEVHANGQIMGIPIQIFVEPAIQHGGLRKVMRHFSGIT
FT SKMLSEGGKMTAWGRKRGFTQRSMIPYAFDFFVPTDTTPKTIREQLSQSKAAAIGRGVQ
FT RVMLLDGKVHGSRTSYERHTDNDQDEYEHGGAEDQRPALY"
XX
SQ Sequence 1905 BP; 588 A; 382 C; 443 G; 492 T; 0 other;
ab044386 Length: 1905 18-AUG-2007 Type: N Check: 5727 ..
1 tttgacattt tatacagcat acgttccaat ttcttttgcg aagaggatag
51 gcaggatgca aaaactgcca tggcacacat gtatcgcgag tttgtttaca
101 cacccatcca caccataacg gggcaggttc ttgtcaagaa gcttggaaat
151 aacagtggac agccaagcac tgttgttgat aacacgctta tcctgatgct
201 gtcatttcta tacgcataca tacggaaaac aaatgataga acatgtgctc
251 aaattaacca gcgtttcaaa tttgtgtgta atggtgatga caacaagtac
301 tcagtttcac ctgaattcca cgaagaattc agcggagatt tttcaaggga
351 gatcgctgaa ctaggtttga catacgaatt cgatgacttg acagctgaca
401 taacgcaaaa cccgtacatg agtctagtga tggtacgaac gcctggtggc
451 attggtttcc aactcaatcc tgagagaatt attgctattg ttcagtggat
501 taaacggggt gatgttctcc aagcatcgca agcagcattt gcagctatga
551 tcgaagcatt caatgatccg tggttattcg gagttttgca cttgtatttt
601 gtgtggctac tttgccaata cagggaagaa attaggtacg ctatggatca
651 tgaccttgga gctgtttgtt acatggatgc ctaccaagtt tatgctttgc
701 attacgacac gagggatgac gttaatgatt tgcaaattga ttcagccagt
751 tgcgagattg agaaaactgt ggttgttgct ggctcaacac agcacatcag
801 tcttcaaatg gacctgagca ctccagtgca attgccaaca aagaaaccat
851 ctgtggaaga caaaggaaaa gctcttgcca caccttcaac aacagctaca
901 ttgccagatt caagccaggg gcaccaacca gttgaagaac caaacaataa
951 cccagacaca gtggatgaag aggacattga atggcgaatc ccagcaatac
1001 aaaaaggttt tggccactac aaaatcccaa aggtcaaagg aaagagaata
1051 tggaacccaa agattttgaa gaaaatcgca catgagcaat tcacgacgac
1101 atcgcagatg gtgacaacag ataaattgga gaaatggact gaggaggtca
1151 aaagagatct tgtggtgaca aatgaaacag atttccagat atgcttaaca
1201 tcgtggtgtc tctggtgtgc taacaatggt acatcatctg agttagacgc
1251 atcacaattt atggaagtcc atgcaaacgg acagataatg gggattccaa
1301 ttcaaatttt tgttgaaccc gcaatccagc acggaggact gcgtaaagtg
1351 atgagacatt tcagtggaat cacgagcaaa atgttgtctg aagggggaaa
1401 aatgacagcg tggggcagga aaaggggttt cacccaaaga tcaatgatac
1451 catatgcctt tgatttcttc gtcccaactg atacgacgcc aaaaacaatc
1501 agggagcagc tgagtcaaag caaggccgca gctattgggc gtggcgttca
1551 aagggtgatg cttcttgatg ggaaagttca cgggagccgc acaagttacg
1601 agagacacac ggataacgac caggacgagt atgaacatgg aggggcggaa
1651 gatcagcgcc cagctttata ttagtaaggt ttgttttgca acaaccatta
1701 ctactagtat tagaagaatt aagtttaatt tctttcacaa tcttcacttt
1751 taacttttgc gtttatgagt taaatgggag tttttgtggg tttttcttcc
1801 aatgctcagc aaccctcaac gcactgcatt tcgttttctt ctttaagctt
1851 gagctggacg ctcagctggt ttcgcatagc gaaacttatc ctgttccata
1901 gaagg