Sequence of DPV Torque teno virus 10
Torque teno virus 10 DNA, complete genome, isolate: JT34F.
ACC No: AB064607
Dated: 2009-11-02 | Length: 3770 | CRC: -794797876
ID AB064607; SV 1; linear; genomic DNA; STD; VRL; 3770 BP.
XX
AC AB064607;
XX
DT 16-DEC-2001 (Rel. 70, Created)
DT 02-NOV-2009 (Rel. 102, Last updated, Version 3)
XX
DE Torque teno virus 10 DNA, complete genome, isolate: JT34F.
XX
KW .
XX
OS Torque teno virus 10
OC Viruses; ssDNA viruses; Anelloviridae; Alphatorquevirus.
XX
RN [1]
RP 1-3770
RA Okamoto H.;
RT ;
RL Submitted (03-JUL-2001) to the EMBL/GenBank/DDBJ databases.
RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and
RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-machi,
RL Kawachi-gun, Tochigi 329-0498, Japan
XX
RN [2]
RX DOI; 10.1007/s705-002-8301-7.
RX PUBMED; 11855633.
RA Peng Y.H., Nishizawa T., Takahashi M., Ishikawa T., Yoshikawa A.,
RA Okamoto H.;
RT "Analysis of the entire genomes of thirteen TT virus variants classifiable
RT into the fourth and fifth genetic groups, isolated from viremic infants";
RL Arch. Virol. 147(1):21-41(2002).
XX
FH Key Location/Qualifiers
FH
FT source 1. .3770
FT /organism="Torque teno virus 10"
FT /isolate="JT34F"
FT /mol_type="genomic DNA"
FT /country="Japan"
FT /note="originally submitted as 'Torque teno virus'"
FT /note="synonym: TT virus"
FT /db_xref="taxon:687349"
FT CDS join(340. .728,2581. .3034)
FT /codon_start=1
FT /transl_table=1
FT /note="ORF4"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:Q8V7F6"
FT /protein_id="BAB79355.1"
FT /translation="MSYWRPPVHNVPGLEHLWYESVHRSHAAVCGCGDFVRHITALAER
FT YGHPGGPRAPGAPGVGGNPNSPQIRRARHPAAAPDPPAGNQPPALPWHGDGGNEGAAGG
FT GNDAGPVADFADDGLDQLVAALDEDESQKTQGRPRAYPRARKALRFTPKRIEAVADQRG
FT RKRSRSPRARDAGDAPQRATPPQPQRAAATQKGPPVCLPATNKDTTGGTHRSMPTIGPQ
FT QWLFPERKPRPPPSAGDWAMEYLACKVFDRPPRTKLTDPPFYPYCKNNYNVTFQLNYK"
FT CDS join(340. .728,2379. .2805)
FT /codon_start=1
FT /transl_table=1
FT /note="ORF3"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:Q8V7F5"
FT /protein_id="BAB79356.1"
FT /translation="MSYWRPPVHNVPGLEHLWYESVHRSHAAVCGCGDFVRHITALAER
FT YGHPGGPRAPGAPGVGGNPNSPQIRRARHPAAAPDPPAGNQPPALPWHGDGGNEGAAGG
FT GNDAGPVADFADDGLDQLVAALDEDELLETPALSPPSNCPEPVRSLHEYKSRTRNSSVP
FT TTHSNRGTSDVATIAQKVLSECQNTKNLLSLFSQVPKNPGSTSGLSKSKKGPQIHSKEN
FT RSRGRPARKKAKQKSKSKRRRRCPSESNSSTTSESSSNSERASSVSSSN"
FT CDS 340. .732
FT /codon_start=1
FT /transl_table=1
FT /note="ORF2"
FT /db_xref="InterPro:IPR004118"
FT /db_xref="UniProtKB/TrEMBL:Q8UYG2"
FT /protein_id="BAB79357.1"
FT /translation="MSYWRPPVHNVPGLEHLWYESVHRSHAAVCGCGDFVRHITALAER
FT YGHPGGPRAPGAPGVGGNPNSPQIRRARHPAAAPDPPAGNQPPALPWHGDGGNEGAAGG
FT GNDAGPVADFADDGLDQLVAALDEDE"
FT CDS 612. .2849
FT /codon_start=1
FT /transl_table=1
FT /note="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:Q8V7F4"
FT /protein_id="BAB79358.1"
FT /translation="MAWRWWKRRRRWWWKRRWTRGRLRGRRARPAGRRPRRRRVRRRRA
FT WRRGRRKRRTFRRRRRRKGRRHRPKLIIRQWQPEIVRKCLIIGYFPMIICGQGRWSENY
FT SSHLEDRVVKQAFGGGHATTRWSLKVLYEENLRHLNFWTWSNRDLELARYLRVTWTFYR
FT HQDVDFIVYFNRKSPMGGSIYTAPMMHPGALMLSKQKILVKSFKTKPRGKATVKVTIKP
FT PTLLVDKWYFQHDICDMTLLNINAVAADLRYPFCSPQTDNPCVSFLVLSTVYNNFLSIA
FT PDELSPVTSNGKEYYKKFLDAAFKTPRDFNAVNTFRTQANFSHPQLTLPNSASNTSANQ
FT YFNTYDGYWGDAIYARDIPAVEPPQTLQQAKEVLINNMENWHRKVQQEGVSKLHHSVFA
FT HNVGLFSSSFLSAGRLATEIPGLYTDIIYNPYTDKGKGNMIWVDYCQKKDNLYKEGQSK
FT CLIANLPLWMACNGYIDWVKKETDNWVISTQARVLMVTPYTYPKMYREDNPLFGFVPYS
FT YAFGDGKMPNGSTYIPFLYRNKWYPITLHQQPVLEDIARSGPFSLKQNMPSATLTAKYK
FT FKFLFGGNPASEQVVRDPCTQPTFELPGASTQPPRIQVTDPKLLGPHYSFKSWDLRRGY
FT YSSKSIKRMSEYEEPSEFIFPGPKKPRVDLGPIQEQERPSDSLQRESKPWQTSEEESEA
FT EVQEQETQEMPLREQLLHNLREQQQLRKGLQCVFQQLIKTQQGVHIDPCLL"
XX
SQ Sequence 3770 BP; 1061 A; 1037 C; 894 G; 778 T; 0 other;
ab064607 Length: 3770 02-NOV-2009 Type: N Check: 618 ..
1 tacgtcacta accacgtgcg tttcacagac caaccgtgtg ctatgtcgtc
51 cacttcctgg gctgtgtcta cgtactaata taaatgactg cacttccgaa
101 tggctgagtt tatgctgccc gtccgatgag aggagccgcg ccaggggatc
151 cgaacgtccc gagggcgggt gccggaggtg agtttacaca ccgcagtcaa
201 ggggcaattc gggctcggga ctggccgggc catgggcaag gctcttaaaa
251 aagccatgtt tctcggtaaa ctacacagaa ggaagagggc actgtcactg
301 cgcggcctgc caactccaaa gaaaaaacca cctcctgata tgagctactg
351 gaggccgcct gtacacaatg tcccggggct cgagcacctc tggtacgagt
401 cagtgcatcg tagccatgct gctgtttgtg gttgtgggga ttttgtacgc
451 catattactg ctctggctga gagatacggc caccccgggg gcccgcgcgc
501 gcctggggct ccgggagtag ggggcaaccc taattctcct cagatccgtc
551 gagcccgcca cccggcggca gctccggacc ccccagcagg taaccaacct
601 ccggccctgc catggcatgg agatggtgga aacgaaggcg ccgctggtgg
651 tggaaacgac gctggacccg tggccgactt cgcggacgac gggctagacc
701 agctggtcgc cgccctcgac gaagacgagt aaggagacgg agggcttgga
751 ggcgtgggcg acgaaagaga cgaactttca gacgcagacg cagacgaaag
801 ggtaggagac acagacccaa actcataata agacagtggc agccagagat
851 tgtcagaaaa tgccttataa taggctattt tcccatgata atctgtggac
901 aaggacggtg gtcagaaaac tacagcagtc acttagagga ccgcgtagtt
951 aaacaagcct ttgggggcgg acacgcgacc accaggtggt cacttaaagt
1001 actatacgag gagaacctca gacacttaaa cttctggacc tggagtaaca
1051 gagacttaga actggccagg tacctacgag tgacgtggac tttttacaga
1101 caccaagatg ttgactttat tgtatacttt aacagaaaga gtcccatggg
1151 aggcagcata tacacagcac ccatgatgca cccaggagcc cttatgctta
1201 gcaaacagaa gatactagta aagagcttta aaacaaaacc cagaggcaag
1251 gccacagtga aagttaccat taagcccccc actctactag tagataagtg
1301 gtactttcag cacgacattt gcgacatgac cttacttaac ataaatgccg
1351 ttgcggctga cttgcggtat ccgttctgct caccacaaac tgacaaccct
1401 tgcgtcagct tcctcgtttt gtcaaccgtc tacaacaact tcctctctat
1451 tgccccagac gaactgtccc cagtaacatc aaatggaaaa gagtattata
1501 aaaaattttt agatgctgca tttaaaacac caagagactt taatgctgta
1551 aatacattta gaacccaagc taatttctca cacccacaac ttacactccc
1601 caacagtgca tcaaatacat cagcaaacca atactttaat acttatgatg
1651 gctactgggg tgatgccata tatgctcgag acatccctgc ggtagaacca
1701 ccacaaacac tacaacaagc aaaagaagta ttaataaata acatggaaaa
1751 ttggcataga aaagtacaac aagaaggagt tagcaaacta catcattctg
1801 tatttgccca caatgtaggc ctatttagca gcagcttttt atctgcagga
1851 agactagcca cagaaattcc aggcctatac acagatataa tttataaccc
1901 ctacacagac aaaggcaaag gaaacatgat atgggtagac tactgtcaaa
1951 aaaaagacaa cttatataaa gaaggccaaa gtaaatgtct aatagctaat
2001 ttaccactgt ggatggcctg caatggatat atagactggg taaaaaaaga
2051 aacagataac tgggtaataa gtacacaagc cagagtacta atggtaactc
2101 cgtacactta cccaaaaatg taccgagaag acaatcctct atttggcttt
2151 gttccatact cctatgcctt tggagatgga aaaatgccca acggtagcac
2201 atacataccg tttctataca gaaacaagtg gtaccctatt acactacacc
2251 aacaaccagt actagaagat atagctagat caggcccctt ctcactaaaa
2301 caaaacatgc ctagcgctac actaacagca aaatacaagt ttaaattctt
2351 attcgggggc aatcccgctt ccgaacaggt tgttagagac ccctgcactc
2401 agcccacctt cgaactgccc ggagccagta cgcagcctcc acgaatacaa
2451 gtcacggacc cgaaactcct cggtccccac tactcattca aatcgtggga
2501 cctcagacgt ggctactata gctcaaaaag tattaagcga atgtcagaat
2551 acgaagaacc ttctgagttt attttcccag gtcccaaaaa acccagggtc
2601 gacctcgggc ctatccaaga gcaagaaagg ccctcagatt cactccaaag
2651 agaatcgaag ccgtggcaga ccagcgagga agaaagcgaa gcagaagtcc
2701 aagagcaaga gacgcaggag atgcccctca gagagcaact cctccacaac
2751 ctcagagagc agcagcaact cagaaagggc ctccagtgtg tcttccagca
2801 actaataaag acacaacagg gggtacacat agatccatgc ctactatagg
2851 tccccagcag tggctttttc ccgagagaaa gcctagaccc cctccatcgg
2901 ccggagactg ggccatggag tacctagctt gcaaagtatt tgacaggccc
2951 cctcgtacca aactcacaga ccctcctttc tacccctact gcaaaaacaa
3001 ttacaatgta acctttcagc tcaactacaa ataaggctca gccttactgt
3051 tctaggccgt gggagtttca cttgtcggtg tctacctcta aaagtcacta
3101 ggcactccga gcgccagcga ggagtgcgac ccttccccct gactcaactt
3151 cttcggagcc gcgcgctacg ccttcggctg cgcgcggcac ctcagacccc
3201 cgctcgtgct gacacgctcg cgcgtgtcag accacttcgg gctcgcgggg
3251 gtcgggaatt ttattaaaca gactccaggt tgccattgga cactggagct
3301 atgaatcagt aacgaaagtg agtggggcca gacttcgcca taaggccttt
3351 atcttcttgc catttgtccg tgtcgggggt cgccataggc ttcgaactcg
3401 gttttaggcc ttccggacta caaaaaccgc catatttgtg acgtcacggc
3451 cgccatttta agtaagcatg gcgggcggtg gtgtcaaatg tcaaaggtca
3501 cagcctgtca tgcttgcaca aaatggcgga cttccgcttc cgggtcgccg
3551 ccatatttgg tcacgtgact tcccacgtca cggccgccat tttagttcac
3601 aaaatggccg acttccttcc tgtttttcaa aaaaaaagcg gaagtgccgc
3651 agcggcggcg gggggcggcg cgctgcgcgc gccgcccagt agggggcgcc
3701 tagcgccccc ccccgcgcat gcgcggggcc cccccccgcg gggggctctg
3751 ccccccggcc ccccccgtgc