Sequence of DPV Torque teno sus virus 1a
Torque teno sus virus 1 ORF3, ORF2, ORF1 genes, complete cds, isolate: Sd-TTV31.
ACC No: AB076001
Dated: 2009-11-02 | Length: 2878 | CRC: 1174923824
ID AB076001; SV 1; linear; genomic DNA; STD; VRL; 2878 BP.
XX
AC AB076001;
XX
DT 18-APR-2002 (Rel. 71, Created)
DT 02-NOV-2009 (Rel. 102, Last updated, Version 5)
XX
DE Torque teno sus virus 1 ORF3, ORF2, ORF1 genes, complete cds, isolate:
DE Sd-TTV31.
XX
KW .
XX
OS Torque teno sus virus 1
OC Viruses; ssDNA viruses; Anelloviridae; Iotatorquevirus.
XX
RN [1]
RP 1-2878
RA Okamoto H.;
RT ;
RL Submitted (12-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and
RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi,
RL Kawachi-Gun, Tochigi-Ken 329-0498, Japan
XX
RN [2]
RX PUBMED; 12029143.
RA Okamoto H., Takahashi M., Nishizawa T., Tawara A., Fukai K., Muramatsu U.,
RA Naito Y., Yoshikawa A.;
RT "Genomic characterization of TT viruses (TTVs) in pigs, cats and dogs and
RT their relatedness with species-specific TTVs in primates and tupaias";
RL J. Gen. Virol. 83(Pt 6):1291-1297(2002).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2878
FT /organism="Torque teno sus virus 1"
FT /isolate="Sd-TTV31"
FT /mol_type="genomic DNA"
FT /country="Japan"
FT /isolation_source="pig"
FT /note="originally submitted as 'Torque teno virus'"
FT /note="synonym: TT virus"
FT /db_xref="taxon:687386"
FT TATA_signal 287. .292
FT CDS join(430. .647,2031. .2487)
FT /codon_start=1
FT /transl_table=1
FT /note="ORF3"
FT /db_xref="UniProtKB/TrEMBL:Q8QVM1"
FT /protein_id="BAB90846.1"
FT /translation="MKEKDYWEEAWLTSCTSIHDHHCDCGSWRDHLWTLCALDDADLAA
FT AADIIEREEADGGEDFGFVDGDPGDAGGSAACTSLPPESKIPALLTRPILSEWSEQLHT
FT PNTPGKAESRPKLEIKVSPLPLSVPSVQLHQIPTRSRRSSKPRKPRKKRKERVRPVSRV
FT PKALLREMDRLMTKQRDALPESESSSYFSSDSLTDPWTTSDDDFQSDPDPLTNKRKKRL
FT QF"
FT CDS 430. .651
FT /codon_start=1
FT /transl_table=1
FT /note="ORF2"
FT /db_xref="UniProtKB/TrEMBL:Q8QVM0"
FT /protein_id="BAB90847.1"
FT /translation="MKEKDYWEEAWLTSCTSIHDHHCDCGSWRDHLWTLCALDDADLAA
FT AADIIEREEADGGEDFGFVDGDPGDAGG"
FT CDS 534. .2441
FT /codon_start=1
FT /transl_table=1
FT /note="ORF1"
FT /db_xref="InterPro:IPR004219"
FT /db_xref="UniProtKB/TrEMBL:Q8QVL9"
FT /protein_id="BAB90848.1"
FT /translation="MRFRRRRFGRRRRYYRKRRGGWRRRFRIRRRRPWRRWRVRRWRRS
FT VFRRRGRRARPYRISAWNPKVLRNCRITGWWPVIQCMDGMEWIKYKPMDLRVEANRIFD
FT KQGSKIETEQMGYLMQYGGGWSSGVISLEGLFNENRLWRNIWSKSNDGMDLVRYFGCRI
FT RLYPTENQGYLFWYDTEFDEQQRRMLDEYTQPSVMLQAKNSRLIVCKQKMPIRRRVKSI
FT FIPPPAQLTTQWKFQQELCQFPLFNWACICIDMDTPFDYNGAWRNAWWLMRRLQNGNME
FT YIERWGRIPMTGDTELPPADDFKAGGVNKNFKPTGIQRIYPIVAVCLVEGNKRVVKWAT
FT VHNGPIDRWRKKQTGTLKLSALRRLVLRVCSESETYYKWTASEFTGAFQQDWWPVSGTE
FT YPLCTIKMEPEFENPTVEVWSWKATIPTAGTLKDYFGLSSGQQWKDTDFGRLQLPRSSH
FT NVDFGHKARFGPFCVKKPPVEFRDSAPNPLNIWVKYTFYFQFGGMYQPPTGIQDPCTSN
FT PTYPVRMVGAVTHPKYAGQGGIATQIGDQGITAASLRAISAAPPNTYTQSAFLKAPETE
FT KEEERESETSFTSAESSSEGDGSSDDQAERRAARKRVIKLLLKRLADRPVDNKRRRFSE
FT "
FT polyA_signal 2458. .2463
XX
SQ Sequence 2878 BP; 835 A; 687 C; 797 G; 559 T; 0 other;
ab076001 Length: 2878 02-NOV-2009 Type: N Check: 3241 ..
1 tacacttccg ggttcaggag gctcaatttg gctcgcttcg ctcgcaccac
51 gtttgctgcc aggcggacct gattgaagac tgaaaaccgt taaattcaaa
101 tttgaaaatg gcgggcaaaa tggcggacag ggggcgggga ttatgcaaat
151 taatttatgc aaagtaggag gagctcgatt ttaatttatg caaagtagga
201 ggagtcattt ctgattggtc gggagctcaa gtcctcattt gcatagggtg
251 taaccaatca gatttaaggc gttcccacta aagtgaatat aagtgagtgc
301 agttccgaat ggctgagttt atgccgccag cggtagacag aactgtctag
351 cgactgggcg ggtgccggag gatcccagat ccggagtcaa ggggcctatc
401 gggcaggagc agctgagcgg agggcctaca tgaaggagaa agactactgg
451 gaagaagcct ggctgaccag ctgtacatcc atacacgacc accactgcga
501 ctgcggtagc tggagagacc acctgtggac gctatgcgct ttagacgacg
551 cagatttggc cgccgccgca gatattatag aaagagaaga ggcggatgga
601 ggagaagatt tcggattcgt agacggcgac cctggagacg ctggcgggta
651 aggagatggc ggcgttccgt cttccgtaga aggggacgta gagcgcgccc
701 ctaccgcatt agcgcgtgga accctaaggt tctaagaaac tgccgcatca
751 caggatggtg gccagtaata cagtgtatgg acgggatgga gtggataaaa
801 tacaagccga tggacttaag agtcgaggca aaccggatat tcgataaaca
851 gggcagtaag atagagacag aacagatggg atacttaatg cagtacggag
901 gaggatggtc aagcggagta atcagcttag agggactttt caatgaaaac
951 agactgtgga gaaacatatg gtctaaaagc aatgacggga tggacttggt
1001 cagatacttc gggtgcagaa ttagactata tccaacagag aatcagggct
1051 acttgttctg gtatgacaca gaatttgacg aacagcagag aagaatgtta
1101 gacgaatata cacaacctag tgtaatgctg caggctaaaa actcccgttt
1151 aatagtatgt aaacaaaaga tgccaattag acggagagta aagagcattt
1201 tcataccgcc accggcacag ttaacaacac agtggaagtt tcagcaggaa
1251 ctgtgtcaat ttccattatt taactgggcc tgtatctgta tagacatgga
1301 cacgccgttc gactacaacg gcgcatggcg aaatgcctgg tggctaatga
1351 gaaggcttca aaacggaaac atggagtaca tagaaagatg gggcagaata
1401 ccgatgacag gagacacaga actgccacca gcagacgact tcaaggcagg
1451 aggggtgaac aaaaacttca aaccgacagg tattcagaga atatacccta
1501 tagtagcagt atgcctagtg gagggaaaca agagagtagt gaaatgggcc
1551 acagtacaca atgggccaat agacagatgg agaaaaaaac agacaggaac
1601 gttaaaacta tctgcactga gaagactagt gcttagagta tgctcagaaa
1651 gtgagacata ctataagtgg acagcatcag aatttacagg agcatttcag
1701 caggactggt ggccagttag cggaacagaa tacccgttat gtacaattaa
1751 aatggagcca gaattcgaaa acccgacagt agaggtgtgg tcatggaaag
1801 caactatacc gacagcagga acactgaaag actatttcgg gctcagttca
1851 gggcaacagt ggaaggacac tgactttggc aggctgcaat tacccagaag
1901 cagccacaat gttgactttg gacataaagc tagatttggc ccattttgtg
1951 tgaaaaagcc tccagtagaa ttcagagact cagcccccaa cccactaaat
2001 atctgggtga aatacacatt ctattttcag ttcggcggca tgtaccagcc
2051 tcccaccgga atccaagatc cctgcacttc taacccgacc tatcctgtca
2101 gaatggtcgg agcagttaca caccccaaat acgccgggca aggcggaatc
2151 gcgacccaaa ttggagatca aggtatcacc gctgcctctc tccgtgccat
2201 cagtgcagct ccaccaaata cctacacgca gtcggcgttc ctcaaagccc
2251 cggaaaccga gaaagaagag gaaagagaga gtgagaccag tttcacgagt
2301 gccgaaagct cttctgaggg agatggatcg tctgatgacc aagcagagag
2351 acgcgctgcc agaaagcgag tcatcaagct acttctcaag cgactcgctg
2401 acagacccgt ggacaacaag cgacgacgat tttcagagtg accctgaccc
2451 cctcaccaat aaacgcaaaa agcgcttgca attctaattc gctgtccgtg
2501 tattcattgg gggggtccgg gggggcttgc ccccccgtta gttgggttct
2551 cgcactcccg cctgccaagt gaaagtcggg gacgagtgag tgcgggacat
2601 cccgtgtaat ggctacataa ctacccggct ttgcttcgac agtggccgtg
2651 gctcgaccct cacacaacaa tgcagatagg gggcgcaatt gggatcgtta
2701 gaaaactatg gccgagcatg gggggggctc cgcccccccc aacccccccg
2751 gtgggggggc caaggccccc cctacacccc cccatggggg gctgctgccc
2801 cccaaacccc ccgcgtcgga tggggggggc tgcgcccccc ccaaaccccc
2851 cttgcccggg gctgtgcccc ggaccccc