Sequence of DPV Turnip mosaic virus

Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:KD32J.

ACC No: AB076424

Dated: 2003-07-07 | Length: 1086 | CRC: 544250056

                !!NA_SEQUENCE 1.0
ID   AB076424   standard; RNA; VRL; 1086 BP.
XX
AC   AB076424;
XX
SV   AB076424.1
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:KD32J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83:1511-1521(2002).
XX
DR   GOA; Q8JX39.
DR   SPTREMBL; Q8JX39; Q8JX39.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1086
FT                   /db_xref="taxon:12230"
FT                   /mol_type="genomic RNA"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="KD32J"
FT   CDS             1. .>1086
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JX39"
FT                   /db_xref="SPTREMBL:Q8JX39"
FT                   /note="first protein"
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /protein_id="BAC02760.1"
FT                   /translation="MAAVTFATAITNTTASRSASTGMVQFGNFPPVPLRSTTATTVATP
FT                   VAQPKLYTVQFGSLDPVVFKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMYEEANKERALFLDWEASLRRSSYGIAENEKVVMTTRGISKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKSSGISIGGGLSASAIEAEEVSTKWPLHKTPSMKRKTMHRRCKMND
FT                   QGIDMLVRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARVQVVHLLGKRAQRDLL
FT                   TGAEENHFIDTLSTYSGNKKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
XX
SQ   Sequence 1086 BP; 345 A; 227 C; 296 G; 218 T; 0 other;

 AB076424  Length: 1086  July 15, 2003 09:14  Type: N  Check: 6488  ..

       1  atggcagcag ttacatttgc aaccgcaatc actaacacca ccgcaagcag
      51  atcagcatcc accggaatgg tacagtttgg gaatttccca ccagtgccat
     101  tgcgatccac caccgccacc acagtcgcca ctccagtggc gcagcctaaa
     151  ctgtacacag tgcagtttgg aagccttgac ccagtagtct tcaagagtgg
     201  agcagggtcc tttgctaagg caacacgcca gcagcctaac gttgaaatag
     251  acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagaccg
     301  aatgccgtgt tgaggatgta cgaggaagca aacaaggaga gagcactctt
     351  tttggactgg gaggccagtt tgaggagaag ctcgtatgga attgctgaga
     401  acgagaaagt tgtaatgaca actcgtggca tcagcaagat agtgcccaga
     451  agttcaaggg caatgaagca aaagcgcgca agggagaggc gtagagcgca
     501  acaaccaatt atactaaagt gggagcccaa atcgagcgga atctcaattg
     551  gaggagggct ttctgcgagc gcgatcgaag cagaagaagt tagcacaaag
     601  tggccgttgc ataaaacacc atcaatgaag aggaagacga tgcacagaag
     651  atgcaagatg aatgatcaag gaattgacat gttagtgcgt tctttgatta
     701  aaatctttaa ggcgaagagt gcgaacattg agttcattgg gaggaagtcc
     751  attaaagtgg attttgtaaa gaaagagcaa acgaagtttg ccagagtgca
     801  agtagtgcat ttgctcggaa agcgggcaca acgcgacctg ttgactggtg
     851  cagaagaaaa ccacttcatt gacaccctaa gcacatactc aggaaataag
     901  aaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattgttat
     951  cagaaacggc attttgaccc agaagcagag cagaagtcct tcgcaagcct
    1001  ttgtgattcg aggagaacat gaagggaagt tgtatgacgc cagggttaag
    1051  gtcacaaagg tgatgagcca taaaatcata cactat