Sequence of DPV Turnip mosaic virus
Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:A102/11.
ACC No: AB076445
Dated: 2003-07-07 | Length: 1086 | CRC: -1889556460
!!NA_SEQUENCE 1.0
ID AB076445 standard; RNA; VRL; 1086 BP.
XX
AC AB076445;
XX
SV AB076445.1
XX
DT 06-JUL-2002 (Rel. 72, Created)
DT 07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:A102/11.
XX
KW .
XX
OS Turnip mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1086
RA Ohshima K.;
RT ;
RL Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN [2]
RA Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT genetic recombination and geographical spread";
RL J. Gen. Virol. 83:1511-1521(2002).
XX
DR GOA; Q8JX18.
DR SPTREMBL; Q8JX18; Q8JX18.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1086
FT /db_xref="taxon:12230"
FT /mol_type="genomic RNA"
FT /organism="Turnip mosaic virus"
FT /isolate="A102/11"
FT CDS 1. .>1086
FT /codon_start=1
FT /db_xref="GOA:Q8JX18"
FT /db_xref="SPTREMBL:Q8JX18"
FT /note="first protein"
FT /gene="P1"
FT /product="polyprotein"
FT /protein_id="BAC02781.1"
FT /translation="MAAVTFASAITNSITSKPASTGMVQFGNFPPVPLRSTVAITAATP
FT VAQPKLCTVQFGSLDPVVVKGGAGSSAKATRQQPNGEIDVSLREAAALEVAKSKPNAVL
FT RMHEEMNKERALFLDWETSLKRRSYGIAENEKIIMTTRGVSKIVPRSTRAMKHKRARER
FT RNSQQQITLKWEPRLSEISIGGGPSASEIEVEEVRTKWPLHKTPSMKEKTVHKVPRMNG
FT QGIDMLMRSLIKIFKAKNANIEYTGRKSVRVDFIKKERVNFARVQVAHLLGKRAQRDLL
FT TGVEENRFIDMLSDYSGNKRTINPGVVRAGWSGIIVRNGALTQERSRSPSKAFVIRGEH
FT EGKLYDARVKVTKMMSHKIVHF"
XX
SQ Sequence 1086 BP; 357 A; 237 C; 279 G; 213 T; 0 other;
AB076445 Length: 1086 July 15, 2003 09:13 Type: N Check: 2893 ..
1 atggcagcag ttacattcgc atcggcaatc accaactcca tcaccagcaa
51 accagcttcc accggaatgg tgcaatttgg gaatttccca ccagtaccat
101 tgcgatccac cgtcgctatc acagccgcca caccagtggc gcaacccaag
151 ttgtgcacag tgcaatttgg aagccttgac ccagtagtcg tcaagggtgg
201 agcagggtcc tctgctaagg caacccgcca gcagcctaac ggtgaaatag
251 acgttagcct cagggaagcc gcagctttgg aggttgcaaa atccaaaccg
301 aatgccgtgt taaggatgca cgaagagatg aacaaggaaa gagcgctctt
351 tttagactgg gaaaccagtt taaagagacg ttcatatggc atcgctgaga
401 acgagaagat catcatgacg actcgtggcg tcagcaaaat agtgcccagg
451 agtacaagag caatgaagca caaacgcgct agagagaggc gcaattcaca
501 gcagcaaatt actctaaagt gggaacccag attgagtgaa atctcaattg
551 gagggggacc ctctgcaagt gaaattgaag tagaggaagt tcgcacaaag
601 tggccgttac acaaaacacc gtcaatgaag gaaaagacag tgcacaaagt
651 gcccaggatg aacggtcagg ggattgacat gttaatgcgc tccttaatca
701 aaatcttcaa ggccaaaaat gcaaacattg agtacaccgg aaggaaatct
751 gtcagagtag actttatcaa gaaagagcga gtgaacttcg ccagggtcca
801 agtagcacat ttacttggaa agagggcaca gcgtgatcta ttaaccggag
851 tggaggaaaa tcgtttcata gacatgttaa gtgactattc aggaaacaaa
901 agaactataa acccaggagt agtgcgcgcc ggctggagcg gaatcattgt
951 tagaaacggt gctctaaccc aagaacggag cagaagccca tcaaaagctt
1001 ttgtgatcag gggtgaacat gaaggcaaat tgtatgatgc cagagtaaag
1051 gtcacaaaaa tgatgagtca taagattgtg catttt