Sequence of DPV Turnip mosaic virus

Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:RUS1.

ACC No: AB076452

Dated: 2003-07-07 | Length: 1086 | CRC: 58856488

                !!NA_SEQUENCE 1.0
ID   AB076452   standard; RNA; VRL; 1086 BP.
XX
AC   AB076452;
XX
SV   AB076452.1
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:RUS1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83:1511-1521(2002).
XX
DR   GOA; Q8JX11.
DR   SPTREMBL; Q8JX11; Q8JX11.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1086
FT                   /db_xref="taxon:12230"
FT                   /mol_type="genomic RNA"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="RUS1"
FT   CDS             1. .>1086
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JX11"
FT                   /db_xref="SPTREMBL:Q8JX11"
FT                   /note="first protein"
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /protein_id="BAC02788.1"
FT                   /translation="MAAVTFAPAITNAITSKSASTGMVQFGSFPPVPLRSTVASAAATP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSSAKATRQQPSIEIDASLREATALEVAKPKPNAVV
FT                   RMHEEMNKERALFLDWEASLKRCSYGIAENEKVVMTTRGASKIVPRSSRAMKQRRARDR
FT                   RRAQQPIILKWEPKLNELSIGGGPSANTIEVEEIRTKWPLHKTPSMKRKTIHKPCRMNK
FT                   QGIDMLMCSLIKIFKAKNANIEYTGRKSIKVDFIRKEKMKFARVQVEHLLGRRAQRDLS
FT                   TGGEENHFIDILSCYSGSKNAIKPGMICAGWSGVVLRHGALTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIIHF"
XX
SQ   Sequence 1086 BP; 358 A; 244 C; 284 G; 200 T; 0 other;

 AB076452  Length: 1086  July 15, 2003 09:14  Type: N  Check: 3282  ..

       1  atggcagcag taacattcgc accagcaatc accaacgcca tcaccagcaa
      51  atcagcatcc accggaatgg tgcaatttgg gagtttccca ccagtaccat
     101  tacgatccac cgtcgctagc gcagccgcca ccccagtggc gcaacctaag
     151  ctgtacacag tacagtttgg aagccttgac ccagtagtcg tcaagggcgg
     201  agcagggtcc tctgctaagg caacccgcca gcagcctagc attgaaatag
     251  atgctagcct cagggaagcc acagctttgg aggttgcaaa acccaaaccg
     301  aatgccgtgg tgaggatgca cgaagaaatg aacaaggaga gagcactttt
     351  tctggactgg gaagccagct taaaaagatg ttcgtatggc atcgccgaga
     401  acgagaaagt cgtgatgaca actagaggag ccagtaagat agtgcccaga
     451  agttcaaggg caatgaaaca gaggcgtgca agagacagac gcagggcgca
     501  acagccaata atcttgaaat gggagccgaa actgaatgag ctctctattg
     551  ggggaggacc ctctgctaac acgattgaag tagaggaaat ccgcaccaag
     601  tggccactac acaagacacc atcaatgaag aggaagacga tacacaagcc
     651  gtgtaggatg aacaagcaag gaattgacat gttaatgtgc tccctgatta
     701  agatctttaa agcaaagaac gccaacatcg agtacacagg aagaaaatcc
     751  atcaaggtgg atttcatcag gaaggagaag atgaagttcg ccagagtcca
     801  agtagaacat ctacttggga ggagagcgca acgtgatcta tcaactggag
     851  gagaagaaaa tcacttcatt gatattctta gctgctactc agggagcaag
     901  aatgctataa agccaggaat gatatgtgcc ggttggagcg gagttgtgtt
     951  acgacacgga gctttaaccc agaaacgaag tagaagcccg tcggaggctt
    1001  ttgtaattag aggcgagcac gaaggcaaac tgtatgatgc tagaatcaag
    1051  gttacaaaaa caatgagcca caagatcata catttc