Sequence of DPV Turnip mosaic virus

Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:NZ290.

ACC No: AB076465

Dated: 2003-07-07 | Length: 1086 | CRC: 1214463268

                !!NA_SEQUENCE 1.0
ID   AB076465   standard; RNA; VRL; 1086 BP.
XX
AC   AB076465;
XX
SV   AB076465.1
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:NZ290.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83:1511-1521(2002).
XX
DR   GOA; Q8JWZ8.
DR   SPTREMBL; Q8JWZ8; Q8JWZ8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1086
FT                   /db_xref="taxon:12230"
FT                   /mol_type="genomic RNA"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="NZ290"
FT   CDS             1. .>1086
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JWZ8"
FT                   /db_xref="SPTREMBL:Q8JWZ8"
FT                   /note="first protein"
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /protein_id="BAC02801.1"
FT                   /translation="MAAVTFASAITNAIINKPTSTGMVQFGSFPPMPLRSTTITTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPKSSAVL
FT                   RMHEEANKERALFLDWETGLKRRSHGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPITLKWEPKLSEFSIGGGSSASAIEAEEVRTKWPLHKTPSLKKRMVHKTCKMSD
FT                   QGVDMLIRSLVKIFKAKSANIEYIRKKSIKADFIRKERTKFARVQVAHLLGKRAQRDLL
FT                   AGVEENHFIDILSEYSGNKTVINPGVVCAGWSGVIVRNEVLTQKRSRSPSKAFVIRGEH
FT                   EGKLYDARIKITKTMSLKIVHF"
XX
SQ   Sequence 1086 BP; 343 A; 239 C; 289 G; 215 T; 0 other;

 AB076465  Length: 1086  July 15, 2003 09:14  Type: N  Check: 5839  ..

       1  atggcagcag tcacatttgc atcagcaatc accaacgcca tcatcaacaa
      51  acctacatcc accggaatgg tacagttcgg gagcttccca ccaatgccat
     101  tacgttccac cactatcacc acagtcgcca ctccagtggc gcaacctaaa
     151  ctgtacacag tgcagtttgg aagccttgac ccagtagtcg tcaagggtgg
     201  agcagggtcc cttgctaagg caacacgcca gcagcctaac gttgaaatag
     251  acgttagcct cagtgaagcc gcagctctgg aggttgcaaa acccaagtcg
     301  agtgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt
     351  tttggactgg gaaaccggtc taaagagacg ctcgcatgga attgctgaga
     401  acgagaaggt cgtgatgaca actcgtggcg ttagcaagat agtgcccaga
     451  agttcaaggg cgatgaagca aaagcgcgca agagagaggc gtagagcaca
     501  gcaaccaatc accctaaaat gggagcccaa attgagtgag ttctcaattg
     551  gaggaggatc ttctgcgagt gcaattgaag cagaggaagt tcgcacaaag
     601  tggccacttc acaagacacc gtcattgaag aagaggatgg tgcacaagac
     651  atgcaagatg agcgatcaag gagttgatat gttaatacgc tctctggtta
     701  agatcttcaa ggctaagagc gccaacatcg agtacatcag gaagaagtca
     751  attaaggctg attttattag gaaagagcga acgaagttcg caagagttca
     801  agtagcacac ctgctcggaa agagagcaca gcgcgatttg ttagccggag
     851  tggaagagaa ccactttatt gacattctca gcgagtattc aggcaacaaa
     901  acggtcataa acccaggagt agtatgtgcc ggttggagcg gagtgatcgt
     951  taggaacgaa gttctaactc agaaacggag cagaagtcca tcaaaagctt
    1001  ttgtaatcag gggtgagcac gaaggcaagt tgtatgatgc cagaatcaag
    1051  atcacaaaaa cgatgagtct taagatcgtg catttt