Sequence of DPV Turnip mosaic virus

Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:NZW6.

ACC No: AB076468

Dated: 2003-07-07 | Length: 1086 | CRC: -238290600

                !!NA_SEQUENCE 1.0
ID   AB076468   standard; RNA; VRL; 1086 BP.
XX
AC   AB076468;
XX
SV   AB076468.1
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:NZW6.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83:1511-1521(2002).
XX
DR   GOA; Q8JWZ5.
DR   SPTREMBL; Q8JWZ5; Q8JWZ5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1086
FT                   /db_xref="taxon:12230"
FT                   /mol_type="genomic RNA"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="NZW6"
FT   CDS             1. .>1086
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JWZ5"
FT                   /db_xref="SPTREMBL:Q8JWZ5"
FT                   /note="first protein"
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /protein_id="BAC02804.1"
FT                   /translation="MAAVTFGSVITNAIINKTTSTGMVQFGSFPPMPLRSTTVITVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPKSSAVL
FT                   RMHEEANKERALFLDWEAGLKRRSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSEFSIAGGLSASAIEAEEVRTKWPLHKTPSAKKRMVHKTCKMSD
FT                   QGVDMLIRSLIKIFKAKSANIEYIGKKPIKADFIRKERTKFARVQVAHLLGKRAQRDLL
FT                   AGVEENHFIDILSEYSGNKTVINPGVVCAGWSGVIVRNEILTQKRSRSPSKAFVIRGEH
FT                   EGKLYDARIKITKIMSLKIVHF"
XX
SQ   Sequence 1086 BP; 346 A; 241 C; 289 G; 210 T; 0 other;

 AB076468  Length: 1086  July 15, 2003 09:14  Type: N  Check: 4387  ..

       1  atggcagcag tcacattcgg atcagtgatc accaacgcca tcatcaacaa
      51  aacaacatcc accggaatgg tacagttcgg gagcttccca ccaatgccat
     101  tacgttccac cactgtcatc acagtcgcca ctccagtggc gcaacctaaa
     151  ctgtacacag tgcagtttgg aagccttgac ccagtagtcg tcaagggtgg
     201  agcagggtcc cttgctaagg caacacgcca gcagcctaac gttgaaatag
     251  acgttagcct cagtgaagcc gcagctttgg aggttgcaaa acccaagtcg
     301  agtgccgtgt tgaggatgca cgaggaagcg aataaggaga gagcactctt
     351  cttggactgg gaagccggtc taaagagacg ctcgtatgga attgctgaga
     401  acgagaaggt cgtgatgaca actcgtggcg tcagtaagat agtacccaga
     451  agttcaaggg cgatgaaaca aaagcgcgca agagagaggc gtagagcaca
     501  gcaaccaatc atcctaaaat gggagcccaa attgagtgag ttctcaattg
     551  cagggggact ttctgcgagc gcgatcgaag cagaggaagt tcgcacaaag
     601  tggccacttc acaagacacc gtcagcgaag aagaggatgg tgcacaagac
     651  atgcaagatg agtgaccaag gagttgacat gttaatacgc tctctgatca
     701  agatcttcaa ggctaagagc gccaacatcg agtacattgg aaagaagcca
     751  attaaggccg atttcattag aaaagaacga acgaaattcg caagagttca
     801  agtggcacac ttgctcggaa aaagagcaca gcgcgatttg ttagccggag
     851  tggaagaaaa ccactttatt gacattctca gcgagtactc aggcaacaaa
     901  acggtcataa acccaggagt agtatgcgcc ggttggagcg gagtgatcgt
     951  taggaatgaa attctaactc agaaacggag cagaagtcca tcaaaagctt
    1001  ttgtaatcag gggtgagcac gaaggcaagt tgtatgatgc caggatcaag
    1051  atcacgaaaa taatgagtct taagatcgtg catttc