Sequence of DPV Turnip mosaic virus

Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:KEN1.

ACC No: AB076470

Dated: 2003-07-07 | Length: 1086 | CRC: -1187837824

                !!NA_SEQUENCE 1.0
ID   AB076470   standard; RNA; VRL; 1086 BP.
XX
AC   AB076470;
XX
SV   AB076470.1
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:KEN1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83:1511-1521(2002).
XX
DR   GOA; Q8JWZ3.
DR   SPTREMBL; Q8JWZ3; Q8JWZ3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1086
FT                   /db_xref="taxon:12230"
FT                   /mol_type="genomic RNA"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="KEN1"
FT   CDS             1. .>1086
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JWZ3"
FT                   /db_xref="SPTREMBL:Q8JWZ3"
FT                   /note="first protein"
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /protein_id="BAC02806.1"
FT                   /translation="MAAVTFASAITNTITNKPTPTGMVQFGSFPPMPLRSTAVTTVTTS
FT                   VVQPKLYTVQFGSLDPVVVKGGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANRERALFLDWEASLKRNSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRTQQPIILKWEPKLSGFSIGGGLSASVIEAEEVRTKWPLHKTPSMKKRTVHRMCKMND
FT                   QGVDMLTRSLVKIFKAKSATIEYIGEKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGVEENHFIDILSGYSGNKTTVNPGVVRAGWSGIVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
XX
SQ   Sequence 1086 BP; 347 A; 245 C; 292 G; 202 T; 0 other;

 AB076470  Length: 1086  July 15, 2003 09:14  Type: N  Check: 6521  ..

       1  atggcagcag ttacattcgc atcagctatc accaacacca tcaccaacaa
      51  accaacaccc accggaatgg tacagtttgg aagcttccca ccaatgccat
     101  tgcgatccac cgccgtcacc acagtcacca cctcagtggt gcaacctaaa
     151  ctgtacacag tgcagtttgg aagccttgac ccagtagtcg tcaagggtgg
     201  agcagggtcc cttgctaagg caacacgcca gcagcctaac gttgaaatag
     251  acgttagcct cagtgaagcc gcagctctgg aggttgcaaa acccagacca
     301  aatgccgtgt tgaggatgca cgaagaagca aacagggaga gagcactctt
     351  tctggactgg gaagccagtt tgaagagaaa ctcgtacgga attgctgaaa
     401  acgagaaagt tgtaatgaca actcgtggcg tcagcaagat agtgcccaga
     451  agttcaaggg cgatgaagca gaagcgcgca agggagaggc gtagaacaca
     501  gcaaccaatt atactgaagt gggagcccaa attgagtggg ttctcaattg
     551  gaggagggct ctcagcgagc gtaatcgaag cagaggaagt tcgcacaaag
     601  tggccacttc acaagacacc gtcaatgaag aagaggacgg tgcacagaat
     651  gtgcaaaatg aacgaccaag gagtcgacat gttgacacga tccctggtta
     701  agatcttcaa ggctaagagt gccaccattg agtacatcgg ggagaagtcg
     751  atcaaggttg atttcatcag gaaggagcga acgaaattcg caagaatcca
     801  agtagcacac ttactcggga agcgagcaca gcgagatttg tcaactggag
     851  tggaggagaa ccattttatt gacattctca gcgggtactc aggcaataaa
     901  acaaccgtaa acccaggagt agtacgtgca ggttggagtg gcatagtcgt
     951  gagaaatgga attctaactc agaaacgaag caggagtcca tcagaggcct
    1001  ttgtaattag aggtgaacac gaaggcaagt tgtacgatgc caggatcaaa
    1051  gtcacgaaga caatgagtca caagattgtg cacttt