Sequence of DPV Turnip mosaic virus

Turnip mosaic virus CP gene for polyprotein, partial cds, isolate:BZ1.

ACC No: AB076529

Dated: 2003-07-07 | Length: 864 | CRC: 387033449

                !!NA_SEQUENCE 1.0
ID   AB076529   standard; RNA; VRL; 864 BP.
XX
AC   AB076529;
XX
SV   AB076529.1
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus CP gene for polyprotein, partial cds, isolate:BZ1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-864
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83:1511-1521(2002).
XX
DR   GOA; Q8JWT4.
DR   SPTREMBL; Q8JWT4; Q8JWT4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .864
FT                   /db_xref="taxon:12230"
FT                   /mol_type="genomic RNA"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="BZ1"
FT   CDS             <1. .>864
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JWT4"
FT                   /db_xref="SPTREMBL:Q8JWT4"
FT                   /note="coat protein"
FT                   /gene="CP"
FT                   /product="polyprotein"
FT                   /protein_id="BAC02865.1"
FT                   /translation="AGETLDAGLTEEQKQAEKEKKEREKAEKERERQKQLALKKGKDVA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYDKRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFENVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHS
FT                   LLGVQGL"
XX
SQ   Sequence 864 BP; 287 A; 182 C; 234 G; 161 T; 0 other;

  AB076529  Length: 864  July 15, 2003 09:06  Type: N  Check: 5212  ..

       1  gcaggcgaga cgcttgatgc aggtttgaca gaggaacaga agcaagcaga
      51  gaaagagaag aaggagagag agaaggcaga aaaggagcga gagaggcaaa
     101  aacagttggc actcaagaaa ggcaaggacg ttgcacaaga agagggaaaa
     151  cgcgacaagg aagtaaacgc tggaacctct ggaactttca gtgtacccag
     201  gcttaagagt ctgacaagca agatgcgcgt gccaagatat gataaaagag
     251  tggccctgaa ccttgatcat ctaatcctgt acacgccgga gcagacggat
     301  ctatccaaca cacgttcaac gcgaaagcag ttcgacacgt ggtttgaaaa
     351  cgtaatggca gattacgaat taacggagga caaaatgcaa atcattctca
     401  atggtttaat ggtctggtgc attgagaacg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttggc
     651  tcgatacgca tttgatttct atgaaatgac ttctagaact ccaatacgtg
     701  cgagagaggc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aacaatttgt tcggcttgga tggaaacgtt ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat agcttactgg
     851  gcgttcaggg gcta