Sequence of DPV Ornithogalum mosaic virus

Ornithogalum mosaic virus gene for polyprotein, partial cds, clone:C7.

ACC No: AB079647

Dated: 2003-07-07 | Length: 1680 | CRC: -637579923

                !!NA_SEQUENCE 1.0
ID   AB079647   standard; RNA; VRL; 1680 BP.
XX
AC   AB079647;
XX
SV   AB079647.1
XX
DT   11-AUG-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Ornithogalum mosaic virus gene for polyprotein, partial cds, clone:C7.
XX
KW   .
XX
OS   Ornithogalum mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1680
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   ;
RL   Submitted (08-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Sciences; 241-7 Kaidobata Nishi Shimoshinjo Nakano, Akita, Akita 010-0195,
RL   Japan (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   "Nucleotide sequence of the coat protein gene of potyviruses infecting
RT   Ornithogalum thyrsoides";
RL   Arch. Virol. 148:613-621(2003).
XX
DR   GOA; Q8JW40.
DR   SPTREMBL; Q8JW40; Q8JW40.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1680
FT                   /db_xref="taxon:12204"
FT                   /mol_type="genomic RNA"
FT                   /organism="Ornithogalum mosaic virus"
FT                   /clone="C7"
FT   CDS             <1. .1410
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JW40"
FT                   /db_xref="SPTREMBL:Q8JW40"
FT                   /note="3'-terminal region"
FT                   /note="nuclear inclusion b - coat protein region"
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAC07298.1"
FT                   /translation="TTGSGNNSGQPSTVVDNTLMVVLAMNYSLAKLNISYEAMDSRIRY
FT                   FANGDDLIIAVNPVGGEQILDSLQDSFSELGLNYDFNDRTYNKEQLSFMSHQALWDGDM
FT                   YIPKIKAERVVSILEWDRSILPEHRIEAVCAAMIEAWGFPNLLQEIRKFYAYMVTQEPY
FT                   SALHAQGQTRYISEQALITLYKDRKVILNDIEPYLQKLAEISLESDEEEVWHQAESMDV
FT                   GGSGRQQDSVARQQDKDVNVGTFSVARVKQISDKMMLPKVRGKAVLNLQHLIQYSPEQT
FT                   EISNTRATRTQFDHWYDKVKESYGVTDDQMSVILNGLMVWCIENGTSSNLHGNWTMMDG
FT                   EEQVEYPLQPILENAQPTFRQIMAHFSNAAEAYIEKRNSEQRYMPRYGNQRNLNDYSLA
FT                   RYAFDFYEMTSRTPNRAREAHIQMKAAALRNTKTKLFGLDGKVGTEEEDTERHTASDVR
FT                   RDMHSLLGVSM"
XX
SQ   Sequence 1680 BP; 512 A; 304 C; 418 G; 446 T; 0 other;

 AB079647  Length: 1680  July 15, 2003 09:03  Type: N  Check: 5975  ..

       1  accacaggat ccgggaataa tagtgggcag ccgtcaactg ttgttgataa
      51  tacactgatg gtcgttttgg caatgaacta ttctctcgca aaactgaaca
     101  tctcatacga agcgatggat agtaggatac gttactttgc caatggagat
     151  gatttgataa ttgcagtcaa tccggttgga ggagaacaaa tcttggactc
     201  cttgcaagat tcattctcgg agctaggatt gaactacgat ttcaacgatc
     251  gtacatacaa taaggaacaa ttgagtttca tgtcccacca agctctttgg
     301  gatggagaca tgtacatacc caaaataaag gcagagcgag tggtgtcgat
     351  tctggagtgg gatagaagta tacttcctga gcatcgaatt gaagcagtct
     401  gcgctgctat gattgaagca tggggctttc ctaacttgct gcaagagatt
     451  aggaagtttt acgcttatat ggtgacacag gaaccatata gtgcgttgca
     501  tgcacaaggg caaacgagat acatttcaga gcaagccctg ataacgcttt
     551  acaaggaccg aaaagtaata cttaatgata ttgaacctta tcttcagaaa
     601  ttggcggaga tatcattgga atcggatgag gaggaagttt ggcatcaggc
     651  ggaatccatg gatgttggcg gttctggtcg acaacaggat agtgttgcgc
     701  gacaacaaga caaggacgtt aatgttggaa cgttctctgt ggcacgagtg
     751  aagcaaatta gtgacaagat gatgctacca aaagtgcgag gaaaggcagt
     801  tctcaatctg cagcacctta ttcagtacag ccctgagcaa acggaaatct
     851  cgaacacaag ggctactcgc acacaatttg accactggta cgataaggtg
     901  aaagaaagtt atggagtaac tgacgatcaa atgtcagtta tactgaatgg
     951  cttgatggtt tggtgtattg aaaatggcac atcatcgaac ttacatggaa
    1001  attggactat gatggatgga gaggaacagg tcgaatatcc attgcaacca
    1051  atacttgaga atgcgcagcc aacttttcga caaattatgg cgcatttctc
    1101  caacgcagcc gaggcgtata ttgagaaaag aaactcggaa caaaggtaca
    1151  tgccgagata tggtaaccaa cgaaatctaa acgactacag tttggcccgc
    1201  tatgcatttg atttttacga aatgacatct cgaacgccca acagggctag
    1251  agaagcacat attcagatga aggcggcagc tcttcgaaac accaaaacga
    1301  agttgtttgg tttagatggg aaagtgggta ccgaggaaga ggacacggaa
    1351  cggcacacgg cgagcgatgt tcgtcgtgac atgcattcac tactgggtgt
    1401  tagtatgtga tttagtgaag gtggattagt tgataatgct tattctactc
    1451  cgttagcatc ctttcctttg aattatgcgt agtacttgtt tgtaccagtg
    1501  actgactcag tcaagtattg cgtcaggtga tggttcgagc aaatattagt
    1551  gtgtgatttc gaacttatta ttgttgtatt gtgattgtta agtagggtga
    1601  ctgttttagt tcatcacgga attacaacag gtgacctatt tagcaaatat
    1651  ctataatatt tcaatagtgt gctagagcta