Sequence of DPV Ornithogalum mosaic virus

Ornithogalum mosaic virus gene for polyprotein, partial cds, clone:C22.

ACC No: AB079648

Dated: 2003-07-07 | Length: 1682 | CRC: -775326559

                !!NA_SEQUENCE 1.0
ID   AB079648   standard; RNA; VRL; 1682 BP.
XX
AC   AB079648;
XX
SV   AB079648.1
XX
DT   11-AUG-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Ornithogalum mosaic virus gene for polyprotein, partial cds, clone:C22.
XX
KW   .
XX
OS   Ornithogalum mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1682
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   ;
RL   Submitted (08-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Sciences; 241-7 Kaidobata Nishi Shimoshinjo Nakano, Akita, Akita 010-0195,
RL   Japan (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   "Nucleotide sequence of the coat protein gene of potyviruses infecting
RT   Ornithogalum thyrsoides";
RL   Arch. Virol. 148:613-621(2003).
XX
DR   GOA; Q8JW39.
DR   SPTREMBL; Q8JW39; Q8JW39.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1682
FT                   /db_xref="taxon:12204"
FT                   /mol_type="genomic RNA"
FT                   /organism="Ornithogalum mosaic virus"
FT                   /clone="C22"
FT   CDS             <1. .1389
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JW39"
FT                   /db_xref="SPTREMBL:Q8JW39"
FT                   /note="3'-terminal region"
FT                   /note="nuclear inclusion b - coat protein region"
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAC07299.1"
FT                   /translation="CGQPSTVVDNTLMVVLAMNYALAKLSISYDQINERIRYFANGDDL
FT                   LIAVEPEGGNQILDSLTASFSELGLNYDFNDRTRDKSQLSFMSHQALWVDGMYIPKIKE
FT                   ERVVSILEWDRSTQPEHRIEAVCATMIEAWGYPDLLQEIRKFYAYMVTQEPYSAIHAQG
FT                   KTRYISEQALITLYKDRKVVLGDIEPYIQKLAEMSLEFEDEEVHHQADSMDAGGPSRQP
FT                   VEVARQPDQDVNAGTFPIARVKAISDKMMLPKVRGKAVLNLQHLIQYSPEQTEISNTRA
FT                   TRTQFDHWYDKVKESYGVTDDQMSVILNGLMVWCIENGTSPNLSGNWTMMDGNEQIEYP
FT                   LQPVLENAQPTFRQIMAHFSNAAEAYIEKRNSEQRYMPRYGSQRNLNDYSLARYAFDFY
FT                   EMTSRTPNRAREAHIQMKAAALRNTKTKLFGLDGKVGTEEEDAERHTASDVRRDMHSLL
FT                   GVSM"
XX
SQ   Sequence 1682 BP; 521 A; 325 C; 408 G; 428 T; 0 other;

 AB079648  Length: 1682  July 15, 2003 09:03  Type: N  Check: 3337  ..

       1  tgcgggcaac catcaacagt tgttgacaat acattgatgg ttgttcttgc
      51  catgaattac gctttggcaa aactttcaat atcatatgat cagataaacg
     101  aacgcattcg ttactttgcc aacggcgatg atttgttaat tgcagttgaa
     151  ccagaaggtg gcaatcaaat tttggactct ctcacggcat ctttttctga
     201  attaggactt aactacgatt ttaacgatag gacaagggac aagtcacaac
     251  ttagtttcat gtcacatcag gcattatggg tggacggaat gtacataccg
     301  aaaattaagg aggaaagagt agtttctatt ttggagtggg ataggagcac
     351  gcaaccagag catcgaatcg aagctgtgtg tgccacaatg attgaagcat
     401  ggggctaccc tgacttgctg caagagatca gaaaattcta tgcgtatatg
     451  gtcacccaag aaccatacag cgcaatacac gctcaaggga aaacgcgcta
     501  catttcggaa caagctttaa tcacattgta caaagaccga aaagttgtgc
     551  ttggcgacat tgaaccgtat attcagaaac tcgccgaaat gagcttggaa
     601  tttgaagatg aagaagtcca ccatcaagca gattcaatgg atgcgggtgg
     651  acccagtcga caaccggttg aggttgctcg acaaccagac caggatgtga
     701  acgcaggcac atttccgata gcaagagtga aggctatcag tgacaaaatg
     751  atgctaccaa aagtgcgagg taaggcagta ctcaatctgc aacaccttat
     801  tcagtacagc cccgaacaga cagaaatatc caacacgcgg gcaactcgca
     851  cacagtttga tcactggtac gataaggtga aggaaagtta tggcgtcact
     901  gacgatcaaa tgtcagtgat tctgaatggc ttgatggttt ggtgcatcga
     951  aaatggcacg tcaccaaacc tgagtggaaa ctggacaatg atggatggca
    1001  acgaacaaat agaatatcca ttacaaccag ttcttgagaa tgcgcaacca
    1051  acatttcgac agattatggc gcatttttca aacgcagccg aggcgtatat
    1101  tgagaaaaga aactcggaac aaaggtacat gccgaggtat ggcagtcaac
    1151  gaaatctgaa cgactacagt ttagctcgct atgcatttga tttttatgaa
    1201  atgacatccc gcacccctaa cagggcgcga gaggcacata ttcaaatgaa
    1251  agcagcggct cttcgaaaca ccaaaacgaa gttgtttggc ttggatggaa
    1301  aagttggtac cgaggaagag gacgcagaac ggcacacggc aagcgatgtt
    1351  cgccgtgata tgcattcact gctaggtgtt agcatgtgat ttagtgaagg
    1401  tgggtttagt tacatgaatt taaatctact ctgttagcat cctttcctat
    1451  gaattatgcg tagtacctat ttgtcttagt gaccagtgta gccaagcgtt
    1501  acgctgggtg ataaggcgtt acgctgggtg ataagacaag tggatattag
    1551  tgtgtgattt cgaacttatt attgttgtat tgtaactgct ggatgaggtg
    1601  actgttttag tctagcacga agattacgat aggtgactca tttagcaaat
    1651  atttataata tttcaatagt gtgttagagg cg