Sequence of DPV Ornithogalum virus 2

Ornithogalum virus 2 gene for polyprotein, partial cds, clone:C16.

ACC No: AB079655

Dated: 2003-07-07 | Length: 1607 | CRC: 618753070

                !!NA_SEQUENCE 1.0
ID   AB079655   standard; RNA; VRL; 1607 BP.
XX
AC   AB079655;
XX
SV   AB079655.1
XX
DT   11-AUG-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Ornithogalum virus 2 gene for polyprotein, partial cds, clone:C16.
XX
KW   .
XX
OS   Ornithogalum virus 2
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1607
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   ;
RL   Submitted (08-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Sciences; 241-7 Kaidobata Nishi Shimoshinjo Nakano, Akita, Akita 010-0195,
RL   Japan (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   "Nucleotide sequence of the coat protein gene of potyviruses infecting
RT   Ornithogalum thyrsoides";
RL   Arch. Virol. 148:613-621(2003).
XX
DR   GOA; Q8JW32.
DR   SPTREMBL; Q8JW32; Q8JW32.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1607
FT                   /db_xref="taxon:186642"
FT                   /mol_type="genomic RNA"
FT                   /organism="Ornithogalum virus 2"
FT                   /clone="C16"
FT   CDS             <1. .1425
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JW32"
FT                   /db_xref="SPTREMBL:Q8JW32"
FT                   /note="3'-terminal region"
FT                   /note="nuclear inclusion b - coat protein region"
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAC07306.1"
FT                   /translation="TTGSGNNSGQPSTVVDNTLMVLLAMFYALHKSGISYQTYKQHCQF
FT                   FINGDDLLIAVNDTLGESALDTFEQSFSELGLNYKFDSGTREKTELWFMSHRGLLIDGM
FT                   YVPKLEPERVVSILEWDRSVEPEHRLEAICAAMIESWGYPELTHQIRLFYRWVLTQAPY
FT                   AALASVGKAPYISEAALKNLYTGTQVKDSELEAYMLAMEEELLKEEDYNVYHQASTSSD
FT                   LDAGRETPVVTTKKKDKDLDTGTSGTFSVPRLRQLPSKMSLPKVRGKTIVNLPHLITYT
FT                   PDQIHLSNTRATMKQFEFWYEGVKKEYEVDDAQMEIIMNGLMVWCIENGTSPNLNGMWV
FT                   MMEGEEQIEFPLKPVIEFAQPTFRQIMAHFSNVAEAYIEKRNSEQKYMPRYGLQRNLTD
FT                   YSLARYAFDFYEMTSKTPVRAREAHMQMKAAAIRGTTNRLFGLDGNVSQKEEDTERHTT
FT                   EDVNRKMHSLLGVSTM"
XX
SQ   Sequence 1607 BP; 475 A; 331 C; 397 G; 404 T; 0 other;

 AB079655  Length: 1607  July 15, 2003 09:03  Type: N  Check: 9732  ..

       1  accacaggat ccggtaataa cagtgggcag ccctcaaccg tggtagataa
      51  caccttgatg gtgttacttg caatgttcta tgcgctgcac aagagcggaa
     101  tctcatatca aacatacaag cagcattgcc agtttttcat aaatggggac
     151  gaccttctaa ttgctgtgaa tgatacactt ggtgagagtg ctctcgacac
     201  gttcgaacaa tcttttagcg aactaggttt gaattacaag ttcgatagcg
     251  gaacacgtga gaagactgaa ctttggttca tgtctcacag aggcctactc
     301  attgatggaa tgtatgtacc gaagttagag ccagagagag ttgtgtctat
     351  tcttgaatgg gacaggagcg tcgagcctga gcatcggctt gaagcaattt
     401  gcgctgcaat gatagagtcg tggggttatc ctgagttaac acaccaaata
     451  cgactgtttt acaggtgggt cttaacacaa gcaccatatg cagccctcgc
     501  atctgttgga aaagcgccat acatctccga agcggctctc aagaacctgt
     551  acacaggaac acaggttaag gattcagagt tggaggcata catgctagcg
     601  atggaggagg agctactgaa ggaagaggac tacaatgtgt accatcaagc
     651  ttcaacttcg agtgacttgg atgctggtcg tgaaacacca gtcgtcacga
     701  ccaagaagaa ggataaagat cttgacacag gaacaagtgg aactttctcg
     751  gtgccacgat tacgccagtt gccaagcaaa atgtcccttc cgaaagtccg
     801  agggaagacc atagtgaatt tgcctcactt aatcacgtac actcccgatc
     851  aaattcacct ctcaaacacg cgcgcaacaa tgaaacagtt tgaattctgg
     901  tatgagggag tgaagaagga atatgaagtc gatgatgccc agatggaaat
     951  aatcatgaat ggattaatgg tgtggtgtat tgaaaacggc acatcaccaa
    1001  atctcaatgg tatgtgggtc atgatggaag gtgaggaaca aatagaattc
    1051  ccactcaagc cagttatcga atttgcccaa ccgacattcc ggcagataat
    1101  ggcacatttc agtaacgttg ctgaagcgta tattgaaaag aggaattctg
    1151  aacagaaata catgcccagg tacgggcttc agcggaattt aactgactac
    1201  agtctcgcgc gttatgcgtt cgatttttac gagatgacat ccaagacgcc
    1251  tgttcgtgct cgagaagcac acatgcaaat gaaggcagcc gccatcagag
    1301  gtaccactaa tcggctgttt ggcttggatg ggaacgttag tcagaaagaa
    1351  gaggacacgg agcgtcacac tactgaagat gtcaacagga aaatgcactc
    1401  actgctgggt gtgtcaacaa tgtagtgtga tggtaggtgc gaacttaccc
    1451  gtcagcatcc tttttattgc aataatataa gtgtgtagct atgcttcagc
    1501  gtggttttac caccgttcac tatattatat gttttagcat ttgtatttct
    1551  tggttgtgtg atgagatttg atctcgtatc aactgtgatt tacagatgtg
    1601  agaagcc