Sequence of DPV Ornithogalum virus 2

Ornithogalum virus 2 gene for polyprotein, partial cds, clone:C27.

ACC No: AB079656

Dated: 2003-07-07 | Length: 986 | CRC: 252340442

                !!NA_SEQUENCE 1.0
ID   AB079656   standard; RNA; VRL; 986 BP.
XX
AC   AB079656;
XX
SV   AB079656.1
XX
DT   11-AUG-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Ornithogalum virus 2 gene for polyprotein, partial cds, clone:C27.
XX
KW   .
XX
OS   Ornithogalum virus 2
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-986
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   ;
RL   Submitted (08-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Sciences; 241-7 Kaidobata Nishi Shimoshinjo Nakano, Akita, Akita 010-0195,
RL   Japan (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Inoue M., Yamamoto H., Furuya H., Naito H., Matsumoto T.;
RT   "Nucleotide sequence of the coat protein gene of potyviruses infecting
RT   Ornithogalum thyrsoides";
RL   Arch. Virol. 148:613-621(2003).
XX
DR   GOA; Q8JW31.
DR   SPTREMBL; Q8JW31; Q8JW31.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .986
FT                   /db_xref="taxon:186642"
FT                   /mol_type="genomic RNA"
FT                   /organism="Ornithogalum virus 2"
FT                   /clone="C27"
FT   CDS             <1. .803
FT                   /codon_start=3
FT                   /db_xref="GOA:Q8JW31"
FT                   /db_xref="SPTREMBL:Q8JW31"
FT                   /note="3'-terminal region"
FT                   /note="nuclear inclusion b - coat protein region"
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAC07307.1"
FT                   /translation="EDFDVYHQTSASSDLDAGREQLSRKEREKDKDLDTGTSGTFSVPR
FT                   LKQLPSKMSIPKVRGKSIVNLPHLITYTPDQIHLSNTRATVKQFEFWYEGVKKEYEVDD
FT                   SQMEIIMNGLMVWCIENGTSPNLSGMWVMMDGEEQIEFPLKPVIEYAQPTFRQIMAHFS
FT                   NVAEAYIEKRNSEQKYMPRYGLQRNLTDYSLARYAFDFYEMTSKTPVRAREAHMQMKAA
FT                   AIRGTTNRLFGLDGNVNQKEEDTERHTTEDVNRKMHSLLGVSTM"
XX
SQ   Sequence 986 BP; 310 A; 178 C; 250 G; 248 T; 0 other;

  AB079656  Length: 986  July 15, 2003 09:02  Type: N  Check: 8133  ..

       1  aagaagactt tgatgtttac catcaaacgt cagcatcgag cgacttggat
      51  gctggtcgcg agcaactcag cagaaaagag agggagaagg ataaggacct
     101  tgatacaggt acgagcggca ctttttcagt cccaagattg aagcaattac
     151  caagcaaaat gtcgatccca aaagtgcgag gaaagtcgat tgtcaatctg
     201  ccacacttaa tcacgtatac accggatcag atacatctat caaacacacg
     251  tgcaactgtt aaacaattcg agttttggta tgaaggggtg aagaaggagt
     301  atgaagtgga tgactcacag atggaaataa tcatgaatgg tttaatggtt
     351  tggtgtatag agaatgggac gtcgccaaat ttgagtggga tgtgggtaat
     401  gatggatgga gaagaacaaa ttgaattccc tttgaaacca gttatcgagt
     451  acgcccaacc gacattcagg cagataatgg cacatttcag taacgtcgct
     501  gaagcgtata ttgaaaagag gaattcagaa caaaaatata tgcccaggta
     551  cgggcttcag cggaatttaa ctgattacag tctcgcgcgc tatgcgtttg
     601  atttttatga gatgacgtcc aagacaccag tgcgagcacg agaggcgcac
     651  atgcaaatga aagcagctgc aattagaggt accactaatc ggctgtttgg
     701  cttggacgga aacgttaatc agaaagaaga ggacacggag cgtcacacta
     751  cagaagatgt caacaggaag atgcattcac tgctgggtgt atcaactatg
     801  tagtgtgata gtaggcagag gcttactcgt cagaatcctt tttattgcaa
     851  taatataagt gtgtaactat gttttagagt ggttgtacca ccgttcacta
     901  tattatatgt tcaagcactt atgtttacca actgtgtggt gaggctttgc
     951  ctcgtatcag ctgtgattca taggtgtacg aaggcg