Sequence of DPV Barley mild mosaic virus

Barley mild mosaic virus genomic RNA for coat protein, partial cds, clone:pNJ7.

ACC No: AB089389

Dated: 2003-07-07 | Length: 753 | CRC: -279599540

                !!NA_SEQUENCE 1.0
ID   AB089389   standard; RNA; VRL; 753 BP.
XX
AC   AB089389;
XX
SV   AB089389.1
XX
DT   25-JAN-2003 (Rel. 74, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Barley mild mosaic virus genomic RNA for coat protein, partial cds,
DE   clone:pNJ7.
XX
KW   .
XX
OS   Barley mild mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
XX
RN   [1]
RP   1-753
RA   Lee K.J., Choi M.K., Lee W.H.;
RT   ;
RL   Submitted (26-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL   Kuijae Lee, Chonbuk National University, Department of Agricultural
RL   Biology, Bioresources Science College of Agriculture; 664-14 1-ga,
RL   Deokjin-dong, Chonju, Chonbuk 561756, Korea
RL   (E-mail:kjlee@mail.chonbuk.ac.kr, Tel:82-63-270-2525, Fax:82-63-270-2531)
XX
RN   [2]
RA   Lee K.J., Choi M.K., Lee W.H.;
RT   "Barley Mild Mosaic Virus Coat Protein Gene Sequence";
RL   Unpublished.
XX
CC   Submitted through BRIC(Biological Research Information Center) of
CC   Korea
CC   URL: http://bric.postech.ac.kr/
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .753
FT                   /db_xref="taxon:12466"
FT                   /mol_type="genomic RNA"
FT                   /note="cDNA library was constructed in E. coli JM109"
FT                   /note="re_sites:XbaI, BamHI;vector:pT7 Blue;average insert
FT                   size:753 bp"
FT                   /organism="Barley mild mosaic virus"
FT                   /clone="pNJ7"
FT                   /clone_lib="BaMMV-IS.CP"
FT   CDS             <1. .>753
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /protein_id="BAC55917.1"
FT                   /translation="SGKDDPDPIVPPVSDTDLTNLAAAPPANTRSRAVVPRGTSDWNLP
FT                   EPKMRMLGFKSKINIETLADVPEGYMNTFASVATETQRRKWEETTRGDFGITDDEKWEK
FT                   LLIAACIYFADNGTSPNFDEELTMEVNGGLNSIKEYPVRPFVVRAKKISTLRRIFRCYS
FT                   IETKLMFVKLRRVPQWAIKHGCLDEIVFDFMIPDQFTSRTALETLKQTKLAAIGVGTSN
FT                   SLLTSEQTNMRTTETRRRNDYDGHEALLR"
XX
SQ   Sequence 753 BP; 203 A; 211 C; 176 G; 163 T; 0 other;

  AB089389  Length: 753  July 15, 2003 09:09  Type: N  Check: 827  ..

       1  tcaggaaaag atgatccaga ccccattgtt cctccagttt ctgacactga
      51  tctcacaaac ttggctgcgg caccacccgc caacacaagg tcgcgcgccg
     101  tcgtcccccg tgggaccagt gactggaatt tgcccgaacc caagatgcgc
     151  atgctaggtt tcaagtccaa aatcaacatc gaaacgctcg ccgatgtccc
     201  cgaagggtat atgaacacct ttgcgtccgt tgcaactgaa acacaacgta
     251  ggaaatggga agagaccacg cgtggtgatt ttggcatcac cgacgacgag
     301  aagtgggaga agctgctcat tgctgcttgc atatatttcg cagacaatgg
     351  cacttcacca aacttcgatg aagagctcac tatggaagtc aatggcggtc
     401  tcaactccat caaagaatat cccgtccgcc cttttgttgt cagggctaaa
     451  aagatctcca cactgcgcag gatttttcgt tgttactcca ttgagacgaa
     501  actaatgttc gtgaaactga ggcgcgtgcc gcaatgggcc ataaagcacg
     551  ggtgccttga tgaaatcgtc ttcgatttca tgatcccaga ccagtttact
     601  tccagaactg cactcgaaac actgaagcaa accaagcttg ccgccattgg
     651  tgttggcaca agcaattctc tcctcacctc cgagcagacg aacatgagaa
     701  ccactgaaac ccgaaggcgc aacgactatg atggtcacga ggcgctcctc
     751  cgg