Sequence of DPV Chinese yam necrotic mosaic virus

Chinese yam necrotic mosaic virus gene for coat protein, complete cds, isolate: IB4.

ACC No: AB098344

Dated: 2004-04-21 | Length: 1098 | CRC: -1972149706

                !!NA_SEQUENCE 1.0
ID   AB098344   standard; genomic RNA; VRL; 1098 BP.
XX
AC   AB098344;
XX
SV   AB098344.1
XX
DT   21-APR-2004 (Rel. 79, Created)
DT   21-APR-2004 (Rel. 79, Last updated, Version 1)
XX
DE   Chinese yam necrotic mosaic virus gene for coat protein, complete cds,
DE   isolate: IB4.
XX
KW   .
XX
OS   Chinese yam necrotic mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae.
XX
RN   [1]
RP   1-1098
RA   Kondo T., Kang D., Fuji S., Chang M.;
RT   ;
RL   Submitted (18-DEC-2002) to the EMBL/GenBank/DDBJ databases.
RL   Toru Kondo, Aomori Green BioCenter, Plant Disease Bio-control Division;
RL   Nogi, Yamaguchi, 221-10, Aomori-shi, Aomori 030-0142, Japan
RL   (E-mail:tooru_kondo@ags.pref.aomori.jp,
RL   URL:http://apple.net.pref.aomori.jp/greenbio/, Tel:81-17-728-1015,
RL   Fax:81-17-728-1017)
XX
RN   [2]
RA   Kondo T., Kang D.K., Fuji S., Chang M.U.;
RT   "Sequence diversity in the coat protein and 3'-untranslated region of
RT   Chinese yam necrotic mosaic virus RNA";
RL   J. Gen. Plant Pathol. 69:397-399(2003).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1098
FT                   /db_xref="taxon:128818"
FT                   /mol_type="genomic RNA"
FT                   /organism="Chinese yam necrotic mosaic virus"
FT                   /isolate="IB4"
FT   CDS             1. .867
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /protein_id="BAD16695.1"
FT                   /translation="MDLSTPVQLPTKKPSVEDKGKALAIPSTTATLPDSSQGHQPVEEP
FT                   NNNPDTVDEEDIEWRIPAIQKGFGHYKIPKVKGKRIWNPKILKKIAHEQFTTTSQMVTT
FT                   DKLEKWIEEVKRDLVVTNETDFQICLTSWCLWCANNGTSSELDASQFMEVHANGQIMGI
FT                   PIQIFVEPAIQHGGLRKVMRHFSGITSKMLSEGGKMTAWGRKRGFTQRSMIPYAFDFFV
FT                   PTDTTPKTIREQLNQSKAAAIGRGVQRVMLLDGKVHGSRTSYERHTDNDQDEYEHGGAE
FT                   DQRPALY"
XX
SQ   Sequence 1098 BP; 358 A; 216 C; 257 G; 267 T; 0 other;

  AB098344  Length: 1098  May 5, 2004 12:52  Type: N  Check: 3037  ..

       1  atggacctga gcactccagt gcaattgcca acaaagaaac catctgtgga
      51  agacaaagga aaagctcttg ccataccctc aacaacagcc acactgccag
     101  attcaagcca agggcaccaa ccagttgaag aaccaaacaa taacccagac
     151  acagtggatg aagaggacat tgagtggcga atcccagcaa tacaaaaagg
     201  ttttggccac tacaaaattc caaaggttaa aggaaagaga atatggaacc
     251  cgaagatttt gaagaaaatc gcacatgagc aattcacaac gacatcgcag
     301  atggtgacaa cagataaatt ggagaaatgg attgaggagg tcaaaagaga
     351  tcttgtggta acaaatgaaa cagatttcca gatatgctta acatcgtggt
     401  gtctctggtg tgctaacaat ggtacatcat ctgagctaga cgcatcacaa
     451  tttatggaag tccatgcaaa cggacagata atggggattc caattcaaat
     501  ttttgttgaa cccgcaatcc agcacggagg actgcgtaaa gtgatgagac
     551  atttcagcgg gatcacgagc aaaatgttgt ctgaaggggg aaaaatgaca
     601  gcatggggca ggaaaagggg tttcactcaa agatcaatga taccatatgc
     651  ctttgatttc ttcgttccaa ctgatacgac gccaaaaaca atcagggagc
     701  agttgaatca aagcaaggct gcagctattg ggcgtggtgt tcaaagggtg
     751  atgcttcttg atgggaaagt tcacgggagc cgcacaagtt atgagagaca
     801  cacggataac gaccaggatg agtacgaaca tggaggggcg gaagatcagc
     851  gcccagcttt atattagtaa ggtttgtttt gcaacaacta ttactactag
     901  tattagaaga attaaattta atctctttca cgatcttcac ttttaacttt
     951  tgcgtttatg agttaaatgg gagtttttgt gggtttttct tccaatgctc
    1001  agcaaccctc aacgcactgc atttcgtttt cttctttaag cttgagctgg
    1051  atgctcagct ggtttcgcat agcgaaattt atcctgttcc atagaagg