Sequence of DPV Satsuma dwarf virus
Satsuma dwarf virus CP gene for coat proteins, partial cds.
ACC No: AB112588
Dated: 2008-06-21 | Length: 2160 | CRC: 1852140293
ID AB112588; SV 1; linear; genomic RNA; STD; VRL; 2160 BP.
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AC AB112588;
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DT 03-MAR-2004 (Rel. 79, Created)
DT 21-JUN-2008 (Rel. 96, Last updated, Version 3)
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DE Satsuma dwarf virus CP gene for coat proteins, partial cds.
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KW .
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OS Satsuma dwarf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales;
OC Sadwavirus.
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RN [1]
RP 1-2160
RA Ito T.;
RT ;
RL Submitted (18-JUN-2003) to the EMBL/GenBank/DDBJ databases.
RL Contact:Takao Ito National Institute of Fruit Tree Science, Department of
RL Citrus Research; otsu 954, Kuchinotsu, Nagasaki 859-2501, Japan
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RN [2]
RA Ito T., Iwanami T., Ieki H., Shimomura K., Shimizu S., Ito T.;
RT "A new virus related to Satsuma dwarf virus: the nucleotide sequence of the
RT 3'-terminal regions of Hyuganatsu virus RNAs 1 and 2";
RL Arch. Virol. 149:1459-1465(2004).
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FH Key Location/Qualifiers
FH
FT source 1. .2160
FT /organism="Satsuma dwarf virus"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:47416"
FT CDS <1. .1980
FT /codon_start=1
FT /transl_table=1
FT /gene="CP"
FT /product="coat proteins"
FT /db_xref="GOA:Q769F1"
FT /db_xref="UniProtKB/TrEMBL:Q769F1"
FT /protein_id="BAD12076.1"
FT /translation="GFTEFSERNENIIEHLFVPSMHGLSLTEDIHLFSENLAIPQTAEF
FT CKELARYKVLSRATNFRSASYYSRLLSGVAILRPHFKFTFRLVTPILESVPLLVVWDDL
FT SELTSKISLLSSAFQIIDSDHTKAAVYEVRPSGPTDLLTPSKEIYGIGGDLVIFSGGYG
FT SSSLTAPLQLKIEASLLKDSQIGSGEVVVPQGPSSMLSFHYLNEVDLGNLDLFAFLGSC
FT KYESSSPVGGRKYISVCPATGLIHNKGRAAYMGLVSSLFSLYNFWRGSYVLKVDVLAKG
FT SSAGSVGIYVPPPGTSADHYSQSQLDTLPRYELPWRGTGTARFEVENFSWIGWHLTKPQ
FT RFVTNDDWFSLNAGLVVVLNQPPVTRTGTTSKVRLIFRIVKFNNLTLRERSTACDVFAG
FT IKDVVYTHPLVDVLDENIFAPAPSSSSDPDLELETTTSAIQTDAPLNNKAFGAYYAYIL
FT GGASSGVRWHSYVLPITMGHHREQIGTTKTGYLNETLDASVRIRYSLRNPLHLLCAAGA
FT YYSADLLFTLVLDGDFTSSRAFAQLGLIQTPLMEYYEGYTTDRALSSEGGYSNQLGLGK
FT SYVQLLVPRRNYRARSITTETAALFIETVGSLSIRFTADAKVKGAHLFVEAVGPIDIDG
FT YGRGLDIGLTDPNIVLMPSLRTAA"
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SQ Sequence 2160 BP; 516 A; 497 C; 509 G; 638 T; 0 other;
ab112588 Length: 2160 21-JUN-2008 Type: N Check: 6996 ..
1 ggtttcacag aattctccga aagaaacgag aatataattg aacatttgtt
51 tgtgccttca atgcatggat tgtctttaac tgaagatatc cacctgtttt
101 cggagaatct tgccattccg caaactgctg agttttgtaa agaattagcg
151 agatataaag tactcagcag agcaacaaat tttaggagtg cgagctatta
201 ttcacgctta ttgtctggag tcgccattct acgaccccat ttcaaattta
251 cttttagact cgtcacccct attcttgaat ccgtgcctct cttggtagtt
301 tgggatgatc tctctgagct aacatccaaa atatccctac tatccagcgc
351 ctttcagatc attgattcgg atcataccaa ggccgcggtg tatgaggtgc
401 gcccgtcggg accaactgat ctactcactc cttctaaaga gatatatggt
451 ataggaggag atttagttat tttctcgggc gggtacggtt catcttccct
501 cacagcccca ttgcaactaa agattgaggc gagtttgctg aaggactcgc
551 agattgggtc gggggaagtg gttgttcccc aaggtccatc ctcgatgctc
601 tcatttcatt acttgaatga ggtggacctc ggtaatttag atttatttgc
651 tttcttaggt agctgtaaat atgagtctag ctcgccagtt ggtgggcgta
701 aatatatttc tgtgtgtcca gctaccggcc ttatacataa caagggccgg
751 gcagcctata tgggacttgt ttcttccctt ttctccttgt acaatttttg
801 gaggggaagc tatgtcctga aggtggacgt tcttgccaaa gggagcagtg
851 ctggatcagt cggcatctac gtgcccccac cgggtactag tgcagatcat
901 tactcccagt ctcagttgga cactctacca agatatgaat tgccttggag
951 aggcactggg acagccaggt ttgaggttga aaatttttcc tggataggtt
1001 ggcacctcac caagccgcag agattcgtta ccaacgatga ttggttttct
1051 cttaatgcgg gtttggtggt ggttttaaac cagccacccg ttactcgaac
1101 tggcactact agcaaggtta gattaatctt ccgaattgtc aaatttaata
1151 atctgacctt gcgagaacga tccacagcct gcgacgtttt cgcaggtata
1201 aaagatgtgg tctacacgca tccgctggtg gatgtattgg atgaaaacat
1251 attcgcacca gcgccgtcta gctcttcaga tccagacctg gagttagaga
1301 ccaccacatc agcaattcaa actgatgccc ccttgaacaa caaagccttt
1351 ggcgcatact acgcctacat tctcggggga gcgtcgtctg gagttaggtg
1401 gcacagttac gtgctaccta ttactatggg acatcatagg gagcagattg
1451 gtaccactaa gacagggtac ctgaatgaaa cactagacgc ctcggtgcgc
1501 attagatact ccctgaggaa tccactgcac ttactttgcg ctgctggcgc
1551 ttattattct gcggatctcc tctttacact cgtgctggac ggggatttta
1601 cttcatcgcg tgcttttgcc cagcttggcc tcatacaaac tccactcatg
1651 gagtattatg agggttatac cactgatcga gccctctcat ctgagggggg
1701 ctactctaat caactgggtt tgggcaaatc atacgtccag ctccttgtcc
1751 caagaagaaa ctatagggct aggtctatca ccacagagac agccgcgctc
1801 ttcatagaaa cagtgggatc cctttcaatc cgctttactg ctgacgctaa
1851 agtgaaaggg gcgcacttgt ttgtggaggc tgtcggccct atagatatag
1901 atggttatgg aagaggcttg gacataggat tgaccgatcc gaatattgtt
1951 ctgatgccct ctctccgtac ggcggcttaa taaaccgccc taggtgctgc
2001 ccaccggacc taaatgtggg atatttatgt acattaagtg tgtttgcttt
2051 gtgtgctttt gttttgtttg ttttgtaata aaataaatgg gttttaaaaa
2101 gggtttctct cactcttccc tttatgaccc gcgagtgtgt gtgtttttct
2151 tgatttgcac