Sequence of DPV Konjac mosaic virus

Japanese hornwort mosaic virus gene for polyprotein, partial cds, isolate:JHMV-FK2.

ACC No: AB181354

Dated: 2004-06-14 | Length: 1574 | CRC: -720172352

                !!NA_SEQUENCE 1.0
ID   AB181354   standard; genomic RNA; VRL; 1574 BP.
XX
AC   AB181354;
XX
SV   AB181354.1
XX
DT   14-JUN-2004 (Rel. 80, Created)
DT   14-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Japanese hornwort mosaic virus gene for polyprotein, partial cds,
DE   isolate:JHMV-FK2.
XX
KW   .
XX
OS   Japanese hornwort mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1574
RA   Yamashita K., Fukui Y.;
RT   ;
RL   Submitted (08-JUN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Kazuo Yamashita, Aomori Field Crops and Horticultural Research Center; 91
RL   Yanagisawa, Inuotose, Rokunohe, Aomori 033-0071, Japan
RL   (E-mail:kazuo_yamashita@ags.pref.aomori.jp, Tel:81-176-53-7631,
RL   Fax:81-176-53-8934)
XX
RN   [2]
RA   Yamashita K., Fukui Y.;
RT   "Japanese hornwort mosaic virus isolate from Water dropwort, polyprotein
RT   partial cds.";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1574
FT                   /country="Japan:Aomori, Fukuchi"
FT                   /db_xref="taxon:189819"
FT                   /mol_type="genomic RNA"
FT                   /organism="Japanese hornwort mosaic virus"
FT                   /isolate="JHMV-FK2"
FT   CDS             <1. .1450
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /protein_id="BAD22826.1"
FT                   /translation="STVVDNTLMVLTAMYYSLLRSGVSLKEHANTIQFFINGDDLIIAV
FT                   EPSAQNLLDVMASHFSELGLNYDFSSRSTKKEDLWFMSHKGVKREGIFIPKLEEERIIS
FT                   ILEWDRSTEPSHRLEAICAAMIEAWGYDWLVHEIRLFYSWVLEQYPYNQLAEQGKAPYI
FT                   AETALHKLYLDRDADEEELLKYIIEQSFEWPQEEHVYHQNGEEEKDEDKNLDAGMQPPK
FT                   KDKGKEPESSNTQDDNRLVQTNRDRDIDMGTSGTFAVPRYKIFKSKLRFPVVRGRKIMN
FT                   MAHLAQYNPEQTDLANTRATQNQFARWFDGIKGDYGLNDAEMDVMLNGLVVWCIENGTS
FT                   PNINGLWTMMDGEEQIEYPIKPLIDHASPTFRQIMAHFSDIAEAYIEKRNFDGKYMPRY
FT                   GLLRNLNDFSLARYAFDFYEMTSKTPNRAREAHLQMKAAALRSANTRMFGLDGKVTTKE
FT                   EDTERHTAEDVKRDLHTLMGVRAI"
FT   mat_peptide     <1. .607
FT                   /product="NIb"
FT   mat_peptide     608. .1447
FT                   /product="coat protein"
XX
SQ   Sequence 1574 BP; 501 A; 301 C; 388 G; 384 T; 0 other;

 AB181354  Length: 1574  June 22, 2004 12:23  Type: N  Check: 6813  ..

       1  gtcaactgtc gtcgataaca cgcttatggt attgacagca atgtactact
      51  ccttattgag gtctggcgtt tcattaaaag agcatgcaaa cacgatacag
     101  ttctttatta atggtgatga tctcataatt gctgtggagc caagtgcaca
     151  aaaccttcta gacgtgatgg catcacactt ctcagagtta gggctaaatt
     201  acgacttttc ttcaaggtca accaagaagg aagatctctg gtttatgtct
     251  cacaaaggtg ttaaaagaga agggattttc ataccaaagc tggaggaaga
     301  gcgcataata tcaatcttag agtgggacag atcaacggaa ccatcacaca
     351  ggcttgaggc catatgcgca gctatgatcg aggcatgggg atacgactgg
     401  ttggtacatg aaattcggct cttctatagc tgggtgttag agcagtatcc
     451  atacaatcaa ttggcagaac aaggcaaggc tccatacata gcggaaacag
     501  cattacacaa attgtattta gatcgtgatg ctgatgaaga ggaactattg
     551  aagtacatta tagagcagag ttttgaatgg ccacaagaag agcacgtata
     601  ccaccagaat ggagaggagg agaaagacga ggacaaaaat ttggatgctg
     651  gcatgcagcc tccaaagaag gacaaaggga aggaacctga gtcatccaac
     701  acacaggatg ataacaggtt agtgcagaca aacagagaca gggatattga
     751  catgggcaca agcgggactt tcgctgtgcc gaggtataag atcttcaaat
     801  ctaaactgag gtttccggtg gtgagaggaa ggaaaataat gaacatggcc
     851  catcttgctc agtacaaccc agaacaaaca gacctagcaa acactagggc
     901  aactcaaaat caatttgcac gttggtttga tggaattaaa ggggattatg
     951  gtttaaatga cgcagagatg gatgttatgc taaatggtct cgtagtttgg
    1001  tgcatcgaga atgggacttc cccaaatata aacggattgt ggactatgat
    1051  ggatggagaa gagcaaatcg aatatccaat caaaccatta atagatcatg
    1101  cgtcacccac attccgacag attatggcgc attttagtga cattgccgag
    1151  gcgtatatag aaaagcgtaa ctttgatgga aagtatatgc cacggtacgg
    1201  tttactccga aacttgaacg actttagtct tgcaagatat gcatttgatt
    1251  tctatgaaat gacatccaag acacccaaca gggcaagaga ggctcacttg
    1301  cagatgaaag cagccgccct gcgcagcgcg aacacgcgta tgtttggttt
    1351  agacgggaaa gttacaacaa aggaagagga cacagagaga catacagctg
    1401  aagatgtgaa gcgtgactta cacactctta tgggtgtgcg cgctatctaa
    1451  tcaaagtttc tctggacgag cctgccttcg tattatagca tcgtataata
    1501  atcgtgctta tctgccgtgc ctttcctttt agtgagtgct tcactcgtgg
    1551  cgagtcatgt cttttaagta ggag