Sequence of DPV Iris yellow spot virus

Iris yellow spot virus N gene for nucleocapsid protein, complete cds.

ACC No: AB181370

Dated: 2008-12-01 | Length: 894 | CRC: -1704670877

                
ID   AB181370; SV 1; linear; genomic RNA; STD; VRL; 894 BP.
XX
AC   AB181370;
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DT   06-JAN-2005 (Rel. 82, Created)
DT   01-DEC-2008 (Rel. 98, Last updated, Version 3)
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DE   Iris yellow spot virus N gene for nucleocapsid protein, complete cds.
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KW   .
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OS   Iris yellow spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-894
RA   Okuda M.;
RT   ;
RL   Submitted (08-JUN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Contact:Mitsuru Okuda National Agricultural Research Center for Kyushu
RL   Okinawa Region; Nishigoshi, Kikuchi, Kumamoto 861-1192, Japan
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RN   [2]
RA   Okuda M., Hanada K., Uematsu S., Fukumoto F., Mihira T., Ebihara Y.,
RA   Iwanami T.;
RT   "Necrotic streaks of Alstroemeria (Alstroemeria ligtu) caused by Iris
RT   yellow spot virus (IYSV)";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .894
FT                   /organism="Iris yellow spot virus"
FT                   /isolate="Als1"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="Alstroemeria"
FT                   /db_xref="taxon:60456"
FT   CDS             complement(2. .823)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="BAD83796.1"
FT                   /translation="MSTVRVKPSEIEKLLSGGDVDVVIESDETEGFNFKNFVLANEGVQ
FT                   MTFNNGYTILRNRAGIYKTIKTGKFTFQGKTIVIPSANVSPNQDDWTFRRLEGFIRARM
FT                   LVELIETKDEKEKQKMYEKICGLPLVSAYGLKPSAKFNATTARIMLTLGGPLTLLASLD
FT                   IFAAAALPLAYFQNVKKEALGISRFSTYEQLCKVARVMAAKESKFTEKYKKIFDETVKI
FT                   LTDCTPGTSGAASLIKFNEQIKILEGAFGKIVEDIGESSKPKNPSKKDRYN"
XX
SQ   Sequence 894 BP; 231 A; 188 C; 166 G; 309 T; 0 other;

ab181370 Length: 894  01-DEC-2008  Type: N  Check: 9738  ..

       1  tttaattata tctatctttc ttggagggat ttttgggttt agaagactca
      51  ccaatgtctt caacaatctt tccaaaagca ccttcaagaa ttttaatctg
     101  ttcattgaat ttaatcaatg aagcagcacc cgaagttcca ggagtgcagt
     151  cagtgaggat cttgacagtt tcatcaaaaa tctttttgta tttctctgtg
     201  aatttggatt cctttgctgc catgactctt gcaactttgc agagttgctc
     251  gtaagttgag aatctgctta taccgagtgc ttcttttttt acattctgga
     301  aataagctaa tggaagggca gctgcagcga agatgtcaag acttgccagc
     351  aaagtgagag gaccacctag tgtcagcatg atcctagctg tagttgcatt
     401  aaacttggca ctaggtttca aaccatatgc acttaccaga ggaagcccgc
     451  agattttttc atacattttc tgcttctcct tctcgtcctt tgtttcaatc
     501  agttctacga gcattctagc tctgataaag ccttctaacc tcctgaatgt
     551  ccaatcgtct tgattggggc tcacattagc actaggaata acaatagtct
     601  ttccttggaa tgtgaatttc cctgttttta ttgtcttgta aatgcctgct
     651  ctgtttctga gaattgtgta gccattattg aatgtcattt ggacaccttc
     701  gtttgccaac acaaaattct tgaaattgaa tccttcagtc tcatcagatt
     751  caattaccac atccacatct ccgccagaca gaagtttctc gatttctgac
     801  ggtttcaccc taacggtaga catggtgaat acttaggaag cagtttactt
     851  tgcagaagtt gtttgaatgt ttgttttata cctcgattgc tcta