Sequence of DPV Soybean mosaic virus

Soybean mosaic virus CP gene for coat protein, partial cds, strain: A2.

ACC No: AB181492

Dated: 2005-04-14 | Length: 798 | CRC: 841519213

                !!NA_SEQUENCE 1.0
ID   AB181492   standard; genomic RNA; VRL; 798 BP.
XX
AC   AB181492;
XX
SV   AB181492.1
XX
DT   06-JAN-2005 (Rel. 82, Created)
DT   14-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Soybean mosaic virus CP gene for coat protein, partial cds, strain: A2.
XX
KW   .
XX
OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-798
RA   Sasaya T., Saruta M.;
RT   ;
RL   Submitted (09-JUN-2004) to the EMBL/GenBank/DDBJ databases.
RL   Takahide Sasaya, National Agricultural Research Center for Western Region,
RL   Laboratory of Plant Virology; 1-3-1 Senyu-cho, Zentsuji, Kagawa, 765-8508,
RL   Japan (E-mail:tsasaya@affrc.go.jp, Tel:81-877-62-0800(ex.1540),
RL   Fax:81-877-63-1683)
XX
RN   [2]
RA   Saruta M., Kikuchi A., Okabe A., Ishikawa K., Sasaya T.;
RT   "Molecular characterization of Soybean mosaic virus isolated from soybean
RT   cultivar Sachiyutaka";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .798
FT                   /country="Japan:Tottori"
FT                   /db_xref="taxon:12222"
FT                   /mol_type="genomic RNA"
FT                   /organism="Soybean mosaic virus"
FT                   /isolate="To"
FT                   /strain="A2"
FT   CDS             <1. .798
FT                   /codon_start=1
FT                   /db_xref="GOA:Q5KSZ4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProt/TrEMBL:Q5KSZ4"
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="BAD83797.1"
FT                   /translation="SGKEKEGEMDAGKDPKKNTSSSKGAGTSNKGVNVGSKGKVVPRLQ
FT                   KITRKMNLPMVEGKIILSLDHLLEYKPNQVDLFNTRATRTQFEAWYNAVKDEYELDDEQ
FT                   MGVVMNGFMVWCIDNGTSPDANGVWVMMDGEEQIEYSLKPIVENAKPTLRQIMHHFSDA
FT                   AEAYIEMRNSESPYMSRYGLLRNLRDRELARYAFDFYEVTSKTPNRAREAIAQMKAAAL
FT                   SGANNKLFGLDGNISTNSENTERHTARDVNQNMHTLLGMGPPQ"
XX
SQ   Sequence 798 BP; 270 A; 141 C; 201 G; 186 T; 0 other;

 AB181492  Length: 798  April 19, 2005 08:50  Type: N  Check: 7929  ..

       1  tcaggcaagg aaaaagaagg ggaaatggat gcaggcaagg acccaaagaa
      51  gaacaccagc agtagcaaag gcgctggtac gagcaacaaa ggtgtaaatg
     101  ttgggtcgaa gggaaaagtt gttccacgct tgcagaagat tacaagaaag
     151  atgaatcttc caatggttga agggaagatc attctcagtt tagaccactt
     201  gctcgagtat aaacctaatc aggttgattt attcaatact cgagcaacaa
     251  gaacacaatt tgaggcatgg tacaatgcag tcaaagatga atatgaactt
     301  gatgatgagc agatgggtgt ggtcatgaat ggtttcatgg tttggtgtat
     351  cgacaatggc acatctccag acgccaatgg tgtgtgggta atgatggatg
     401  gagaagagca gattgaatat tcgctaaagc ccattgttga aaatgcgaaa
     451  ccaactctaa gacaaatcat gcaccatttt tcggatgcag ctgaagctta
     501  cattgagatg agaaattctg aaagtccgta tatgtctaga tatggattac
     551  taaggaattt gagagataga gagctagctc gctatgcctt tgatttctat
     601  gaagtcactt ccaaaacacc aaatagggca agggaggcaa tagcgcagat
     651  gaaggctgca gctctctcgg gagctaacaa caagttgttt ggacttgatg
     701  gaaacatctc aactaactcc gaaaatactg aaaggcatac tgcaagagat
     751  gtgaatcaaa acatgcacac tcttctgggc atgggtccac cgcagtaa