Sequence of DPV Potato virus Y
Potato virus Y gene for polyprotein precursor (NIb replicase and coat protein region), partial cds, 3'UTR, isolate:Syrian 2/3/4.
ACC No: AB185831
Dated: 2009-03-12 | Length: 1205 | CRC: -504083277
ID AB185831; SV 1; linear; genomic RNA; STD; VRL; 1205 BP.
XX
AC AB185831;
XX
DT 02-OCT-2007 (Rel. 93, Created)
DT 12-MAR-2009 (Rel. 100, Last updated, Version 2)
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DE Potato virus Y gene for polyprotein precursor (NIb replicase and coat
DE protein region), partial cds, 3'UTR, isolate:Syrian 2/3/4.
XX
KW .
XX
OS Potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1205
RA Chikh Ali M.S., Maoka T., Natsuaki K.T.;
RT ;
RL Submitted (27-JUL-2004) to the EMBL/GenBank/DDBJ databases.
RL Contact:Mohamad S Chikh Ali Laboratory of Plant Pathology, Faculty of
RL Agriculture, Utsunomiya University; Mine-machi 350, Utsunomiya 321-8505,
RL Japan
XX
RN [2]
RA Chikh Ali M.S., Maoka T., Katayama K., Natsuaki K.T.;
RT "The nucleotide sequences of the coat protein and 3'UTR of three Syrian
RT isolates of potato virus Y.";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1205
FT /organism="Potato virus Y"
FT /lab_host="Nicotiana tabacum cv. Samsun"
FT /isolate="Syrian 2/3/4"
FT /mol_type="genomic RNA"
FT /country="Syria:Idlb, Ram Hamdan"
FT /isolation_source="potato"
FT /db_xref="taxon:12216"
FT CDS <1. .877
FT /codon_start=2
FT /transl_table=1
FT /product="polyprotein precursor"
FT /db_xref="GOA:A8C5R3"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:A8C5R3"
FT /protein_id="BAF80892.1"
FT /translation="RAFTEMMVALDDELECDTYEVHHQGNDTIDAGGSTKKDAKQEQGS
FT IQPNLNKGKEKDVNVGTSGTHTVPRIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDI
FT SNTRATQSQFDTWYEAVQLAYDIGETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDE
FT QVEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARY
FT AFDFYEVTSRTPVRAREAHIQMKAAALKSAQSRLFGLDGGISTQEENTERHTTEDVSPS
FT MHTLLGVKNM"
FT mat_peptide <2. .73
FT /gene="NIb"
FT /product="NIb replicase"
FT mat_peptide 74. .874
FT /gene="CP"
FT /product="coat protein"
FT 3'UTR 878. .1205
XX
SQ Sequence 1205 BP; 378 A; 223 C; 286 G; 318 T; 0 other;
ab185831 Length: 1205 12-MAR-2009 Type: N Check: 6184 ..
1 aagagccttc actgaaatga tggttgcctt ggatgatgag cttgagtgcg
51 atacttatga agtgcaccat caaggaaacg acacaatcga tgcaggagga
101 agcactaaga aggatgcaaa acaagagcaa ggtagcattc aaccaaatct
151 caacaaggga aaggaaaagg acgtgaatgt tggaacatct ggaactcata
201 ctgtgccacg aattaaagct atcacgtcca aaatgagaat gcccaagagt
251 aaaggtgcaa ctgtactaaa tttggaacac ttactcgagt atgctccaca
301 gcaaattgac atctcaaata ctcgagcaac tcaatcacag tttgatacgt
351 ggtatgaagc ggtacaactt gcatacgaca taggagaaac tgaaatgcca
401 actgtgatga atgggcttat ggtttggtgc attgaaaatg gaacctcgcc
451 aaacatcaac ggagtttggg ttatgatgga tggagatgaa caagtcgaat
501 acccactgaa accaatcgtt gagaatgcaa aaccaacact taggcaaatc
551 atggcacatt tctcagatgt tgcagaagcg tatatagaaa tgcgcaacaa
601 aaaggaacca tatatgccac gatatggttt agttcgtaat ctgcgcgatg
651 gaagtttggc tcgctatgct tttgactttt atgaggtcac atcacgaaca
701 ccagtgaggg ctagggaagc acacattcaa atgaaggccg cagcattgaa
751 atcagcccaa tctcgacttt tcgggttgga cggtggcatc agtacacaag
801 aggagaacac agagaggcac accaccgagg atgtctctcc aagtatgcat
851 actctacttg gagtcaagaa catgtgatgt agtgtctctc cggacgatat
901 ataagtattt acatatgcag taagtatttt ggcttttcct gtactacttt
951 tatcataatt aataatcagt ttgaatatta ctaatagata gaggtggcag
1001 ggtgatttcg tcattgtggt gactctatct tttaattccg cattattgag
1051 tcttagataa aagtgccggg ttgtcgttgt tgtggatgat tcatcgatta
1101 ggtgatgttg cgattctgtc gtagcagtga ctatgtctgg atctatctgc
1151 ttgggtggtg ttgtgatttc gtcataacag tgactgtaaa cttcaatcag
1201 gagac