Sequence of DPV Ageratum yellow vein virus
Ageratum yellow vein virus-[Indonesia] C1, C4, V1, V2 genes for replication-associated protein, putative C4 protein, capsid protein, putative V2 protein, partial and complete cds, clone: AgMag-5.
ACC No: AB189854
Dated: 2008-12-13 | Length: 1557 | CRC: -964430080
ID AB189854; SV 1; linear; genomic DNA; STD; VRL; 1557 BP.
XX
AC AB189854;
XX
DT 08-MAR-2005 (Rel. 83, Created)
DT 13-DEC-2008 (Rel. 98, Last updated, Version 4)
XX
DE Ageratum yellow vein virus-[Indonesia] C1, C4, V1, V2 genes for
DE replication-associated protein, putative C4 protein, capsid protein,
DE putative V2 protein, partial and complete cds, clone: AgMag-5.
XX
KW .
XX
OS Ageratum yellow vein virus-[Indonesia]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-1557
RA Ikegami M.;
RT ;
RL Submitted (05-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL Contact:Masato Ikegami Tohoku University, Plant Pathology, Departemen of
RL Life Science; 1-1 Tsutsumidori-Amamiyamachi, Sendai, Miyagi 981-8555, Japan
XX
RN [2]
RA Sukamto, Kon T., Hidayat S.H., Ito K., Hase S., Takahashi H., Ikegami M.;
RT "Begomoviruses Associated with Leaf Curl Disease of Tomato in Java,
RT Indonesia";
RL J. Phytopathol. 153:562-566(2005).
XX
FH Key Location/Qualifiers
FH
FT source 1. .1557
FT /organism="Ageratum yellow vein virus-[Indonesia]"
FT /host="Ageratum conyzoides"
FT /mol_type="genomic DNA"
FT /country="Indonesia:Magelang, Dukun"
FT /clone="AgMag-5"
FT /db_xref="taxon:292479"
FT CDS complement(<1. .767)
FT /codon_start=1
FT /transl_table=1
FT /gene="C1"
FT /product="replication-associated protein"
FT /protein_id="BAD90887.1"
FT /translation="MAPPKRFKIQGKNYFLTYPQCSLTKEEALSQIQALDTPTNKKYIK
FT ICRESHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDFVLQFY
FT NLNANLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPISIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDA"
FT CDS complement(320. .610)
FT /codon_start=1
FT /transl_table=1
FT /gene="C4"
FT /product="putative C4 protein"
FT /protein_id="BAD90888.1"
FT /translation="MGALISTCLSSLKENTSARITDSSTWYPQPGQHISIRTFRELNPA
FT PTSSPISTRTETPSNGVSFRSMDDLQEEDNRQPMMLTPRHLTAAVSQRLLM"
FT CDS 1035. .1385
FT /codon_start=1
FT /transl_table=1
FT /gene="V2"
FT /product="putative V2 protein"
FT /protein_id="BAD90889.1"
FT /translation="MWDPLLNEFPETVHGLRCMLAVKYCQLIEQTYAPDTLGYDLIRDL
FT ISVIRARNYVEATRRYSHFHSRLEGTSPSELRHPRDEPCCCPHCPRHQQKKDMDQQAHV
FT SQAQDVQNVQKP"
FT CDS 1195. .>1557
FT /codon_start=1
FT /transl_table=1
FT /gene="V1"
FT /product="capsid protein"
FT /protein_id="BAD90890.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDTPVMSRAAVPTVLVTNKRRTW
FT TNRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGNGLTH
FT RVGKRFCVKSVYVLGKI"
XX
SQ Sequence 1557 BP; 425 A; 346 C; 336 G; 450 T; 0 other;
ab189854 Length: 1557 13-DEC-2008 Type: N Check: 7538 ..
1 caagcatcat tgctgtacac tttgggactc agatctagat gtccgcacaa
51 ataattgtgt ggtcccagtg atctggccca cattgttttg cccgtacgac
101 tatcaccttc tatcacaata ctgatgggtc tccatggccg cgcagcggca
151 ccactcacgt tctcggaaac ccattcttca agttcttcgg gaacttgatc
201 gaaagaagaa gacaaaaaag gacaaacaaa aacctctaaa ggaggtgcaa
251 atatcctatc taaattagca tttaaattat aaaattgtaa aacgaaatct
301 ttaggagcta gctccttaat tacattaaga gcctctgact tactgccgct
351 gttaagtgcc tgggcgtaag catcattggc tgtctgttgt cctcctcttg
401 cagatcgtcc atcgatctga aactcacccc attcgagggt gtctccgtcc
451 ttgtcgatat aggacttgac gtcggagctg gatttagctc cctgaatgtt
501 cggatggaaa tgtgctgacc tggttgggga taccaagtcg aagaatctgt
551 tattcgtgca gacgtatttt ccttcaaact ggataagcac gtggagatga
601 gggctcccat cttcgtgtga ttctctgcag atttttatgt atttcttatt
651 tgttggtgta tctagggctt gaatttggga aagtgcttct tcttttgtaa
701 gagaacactg tggataagtg aggaaataat ttttgccttg tattttaaaa
751 cgtttgggag gagccattga cttggtcaat tggagacatt catagttctc
801 tgtcaattgg agacaggaga caatatatag gtgtctccaa atggcataat
851 tgtaatttct acaagaaatt caaattccaa aagcggccat ccgtataata
901 ttaccggatg gccgcgattt ttttaaagtg gtccccacca ctaaaaaatg
951 tcccccactc ataacgctcc ctcaaagctt atttaattca aatccattat
1001 aaatacttgg tccccacgat ttcaaattaa agaaatgtgg gatcctcttt
1051 tgaacgagtt tcccgaaact gtgcacggtc ttaggtgtat gcttgccgta
1101 aaatattgtc agttaatcga acagacatac gctccagaca ctcttggtta
1151 cgatcttata cgagatttaa tctcagtaat tcgtgcacgc aattatgtcg
1201 aagcgacccg ccgatatagt catttccact cccgcctcga aggtacgtcg
1251 ccgtctgaac ttcgacaccc ccgtgatgag ccgtgctgct gtccccactg
1301 tcctcgtcac caacaaaaga aggacatgga ccaacaggcc catgtatcgc
1351 aagcccagga tgtacagaat gtacagaagc cctgatgtgc ccaaaggttg
1401 tgaaggccca tgtaaggtcc aatcgtatga acagaggcac gacatatccc
1451 atgttggtaa agtattatgt gttagtgatg tcacccgtgg taatgggctt
1501 acccatcgtg ttggtaagag attctgtgtg aaatccgttt atgtattggg
1551 taaaata