Sequence of DPV Melon necrotic spot virus
Melon necrotic spot virus CP gene for coat protein, complete cds, isolate: Kouchi.
ACC No: AB189943
Dated: 2009-10-08 | Length: 4271 | CRC: -383261299
ID AB189943; SV 1; linear; genomic RNA; STD; VRL; 4271 BP. XX AC AB189943; XX DT 28-SEP-2005 (Rel. 85, Created) DT 08-OCT-2009 (Rel. 102, Last updated, Version 2) XX DE Melon necrotic spot virus CP gene for coat protein, complete cds, isolate: DE Kouchi. XX KW . XX OS Melon necrotic spot virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; OC Carmovirus. XX RN [1] RP 1-4271 RA Omura T.; RT ; RL Submitted (06-SEP-2004) to the EMBL/GenBank/DDBJ databases. RL Contact:Toshihiro Omura National Agricultural Research Center, Laboratory RL of Virology; Kannondai, Tsukuba, Ibaraki 305-8666, Japan XX RN [2] RA Kubo C., Nakazono-Nagaoka E., Hagiwara K., Kajihara H., Takeuchi S., RA Matsuo K., Ichiki T.U., Omura T.; RT "New severe strains of Melon necrotic spot virus: symptomatology and RT sequencing"; RL Plant Pathol. 54:615-620(2005). XX FH Key Location/Qualifiers FH FT source 1. .4271 FT /organism="Melon necrotic spot virus" FT /isolate="Kouchi" FT /mol_type="genomic RNA" FT /db_xref="taxon:11987" FT CDS 2817. .3989 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q3LHM1" FT /db_xref="InterPro:IPR000937" FT /db_xref="UniProtKB/TrEMBL:Q3LHM1" FT /protein_id="BAE45292.1" FT /translation="MAMIKRINNLPTVKLAKQALPLLTNPKIVNKAIDVVPLVVQGGQK FT LSKAAKRLLGAYGGNISYTEGAKPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI FT ASVLPSNDLTVNNGDVNIGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHSADSAPWAENVLVVPCDNTWRYMNDTNAV FT DRKLVDFGQFLFATYSGAGATAHGDLYVEYAVEFKDPQPIAGMVCMFDRLVSFSEVGST FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNATSIGSLTFTGNSKLVGNSLNVT FT SSGASALTFTLNSTGVPNSSNSSFSVGTVVALTRVRMTITRCSPETAYLA" XX SQ Sequence 4271 BP; 1082 A; 890 C; 1059 G; 1240 T; 0 other; ab189943 Length: 4271 08-OCT-2009 Type: N Check: 4016 .. 1 gggattactc tagccgaatc cccgactttc ttggtttctg tgagttagtt 51 cgtatattgg ttatctatct taactaatac aggttagcaa tggatactgg 101 tttgaaattt cttgtttctg gaggtttagc cacctcatct gttatcagga 151 aagtgagtgc tgtgagttca ttggattcgt cccttccttc atcgtctata 201 ctatctgcca ttcatgggtc ttggactagt gctatcagcc acgattgcag 251 caagattgcc aaggttgcca ccgtaattgg aattggttat ctcggggttc 301 ggattggtgc cgcatggtgt cgtcgtaccc ccggaatagc gaactctata 351 attacatatg gggaagaagt ggttgagcaa gtaaaggtgg atattgatga 401 agatgctgaa gaggagtccg atactggtga ggaaattgtg gttggcacga 451 taggtattgg tatacacaca aacgtcaacc ctgaagttcg agctaagcgc 501 agacatagat cgaggccatt cattaagaaa attgtgaatt taacgaaaaa 551 tcactttggt ggatgtcccg attcaagtaa atcgaacgtc atggctgtta 601 gtaaattcgt ttatgaacaa tgcaaacagc acaattgtct tccacatcag 651 acgagattga tcatgagtgt tgcagttcca ttggtgttaa gtcccgacat 701 gtacgacatt tccagtaaag ctctgttaaa cagcgagata ttaacagaaa 751 acagagctac actggaccgc ctcaaaactc ttgatgggtg gctgtcacat 801 ttagtgtgcc acccccttag cgcgaaggct tggaggcggg cgattgacaa 851 cttgtgtggt cttcctgatt ggaaggcctt caagttagtc aactaagggt 901 gcctagagga actcgctggg ttctgtactt cggtacggag agggacgcac 951 ccagacatga ccgagtttcc tcaggatcgt cccattaaga cacgcaaact 1001 gtattgtttg gggggagttg gaactagcgt gaagttcaat gtacacaata 1051 actctctagc caaccttcgg cgcggtctta tagaacgcgt tttctttgtt 1101 gaaaatgata agaaggaact agagcctgcc cctaaacccc ttagtggtgt 1151 gtttgaccgc ttaacctggt ttcgtcggaa actccataac atcgtgggta 1201 ctcattccag tattagtcca ggtcaattct tggatttcta tactggcagg 1251 aggcgtacaa tttatgaagg tgccgtgaag tcattggagg ggttaagtgt 1301 tcagagaagg gatgcctatt tgaaaacgtt tgttaaggcg gagaagatta 1351 acaccactag gaagcctgac ccagctccgc gggtcataca accgaggaac 1401 gtaagatata atgttgaggt tggtcgttat ctacgtaggt ttgagcatta 1451 cctctatcga ggaattgatg aaatctggaa tggccccaca ataattaaag 1501 gatacactgt cgagcaaatt gggaaaatcg ctcgcgatgc ttgggactct 1551 ttcgtgagcc ccgtagcaat cgggtttgat atgaagaggt tcgaccaaca 1601 tgtatcctcc gacgctctta aatgggaaca tagtgtttat cttgatgctt 1651 tttgccatga ttcttatctt gcagaattgt tggagtggca attagttaat 1701 aagggagtcg ggtatgccag tgatggaatg atcaaatata aggttgatgg 1751 gtgccggatg agtggtgata tgaatacagc tatgggtaac tgtctgattg 1801 cctgtgccat cacacatgac ttcttccgta gtcgtggcat cagggcgcgt 1851 ttgatgaaca atggtgatga ctgtgtcgta atatgtgaaa aagaatgtgc 1901 cgcggtggtt aaagccgaca tggtaaggca ctggagacaa ttcgggtttc 1951 aatgtgagct cgaatgcgac gcagaaatct tcgagcaaat tgagttttgt 2001 caaatgcggc ccgtgtacga cggggaaaaa tatgtgatgg tgcggaatcc 2051 attagtcagt ctgtctaaag attcatactc agtcggccct tggaatggaa 2101 tcaaccatgc acgcaagtgg gtaaatgccg taggcttgtg tggcttatcc 2151 ctcactggtg gtattcctgt tgtccaaagt tactataata tgatgattcg 2201 taacactcaa tccgtgaaca gttctggcat tcttcgagat gtcagttttg 2251 ctagcggatt tcgggagtta gcgcgattgg gtaacaggaa aagtggtgct 2301 atatcagaag acgcccgttt tagcttttat ctcgcatttg gcattactcc 2351 agatttacaa cgtgccatgg aaagtgacta tgatgctcat accatagagt 2401 ggggtttcgt gccccaggga aatcctagaa tacagccaat ctcatggact 2451 ctcaacgaac tgtagaacaa actagtcctc ggggaagaag taaagaacgt 2501 ggtgacagcg ggggaaaaca gaagaactca atggggcgaa agatagccaa 2551 tgatgctatc tctgaatcga agcagggggt tatgggtgct agcacataca 2601 ttgctgacaa aattaaggta accatcaact ttaattttta atgtatggct 2651 tgttaccgtt gtgactccag ccccggggat tactctggag ctctgcttat 2701 attatttatc tcatttgttt tcttctatat tacctcgctt agcccgcaag 2751 gaaatactta cgttcatcac ttcgataatt cttccgttaa aacgcaatac 2801 gtcggcatct ctacaaatgg cgatgattaa acgcattaat aatttaccaa 2851 cagtgaagct tgctaagcag gccctgcccc tgctaacgaa tcctaaaatt 2901 gtgaataagg ctatagatgt ggttcctttg gtcgtccaag gtggtcagaa 2951 attgtccaaa gctgccaagc ggttgcttgg cgcttatggt ggtaatattt 3001 cttacactga gggcgctaag cctggtgcaa tatccgcccc agttgccatt 3051 agtaggcgag tggcgggtat gaagcctagg tttgttcgat ccgaaggatc 3101 agtgaagata gttcataggg agtttattgc ctctgttctt ccgtcaaatg 3151 atctcaccgt gaataatggt gatgtcaaca tcggtaagta tagggtcaat 3201 cccagtaata atgctttatt cacatggctt cagggacaag cgcaattata 3251 tgatatgtac agatttactc gactccgatt tacctatata ccaactaccg 3301 ggtccacttc cacaggtcgt gtttctattc tctgggatag agactctcag 3351 gatcccctcc ccattgatcg cgccgctatt agttcttatg ctcattccgc 3401 tgattcagcg ccttgggcag agaacgtttt agtggttccg tgtgacaaca 3451 cgtggaggta tatgaatgat accaatgcag tggatcggaa gttggttgat 3501 tttgggcagt ttctctttgc tacttattct ggtgctggtg ccaccgccca 3551 tggtgatctc tatgttgagt acgctgttga attcaaagat ccccagccaa 3601 ttgctggaat ggtttgtatg tttgatcgct tggtttcttt ctctgaagtc 3651 ggatctacaa ttaaaggagt caactacatt gctgatcgtg atgtgataac 3701 tactgggggt aatattggtg ttaacatcaa cattcccggg acttatctcg 3751 tcacgattgt tcttaatgcc acatcaattg gctcccttac cttcactggc 3801 aattctaaac tcgtaggcaa tagtcttaac gttaccagca gtggcgcttc 3851 tgctctcaca ttcaccctta actctactgg ggtgcccaac agttccaatt 3901 cttcattctc tgtgggcact gtcgttgcgt taactagggt tcgtatgacg 3951 atcactcgct gctctcctga aactgcctac ctcgcctagt atgaaataac 4001 tacactccaa aatctggtct cccttattcc tacctgttct cagccagatc 4051 tctgttctgg tgtcctatag gtgtccttgt cgtgtgtagt gcggtctggc 4101 taaccgtaac ggcgtatcgg ctcggttctt cgatgattag gctccgggat 4151 gtacgacata gctgaagatg gatggcgttc ggtggatcac cgctagcaaa 4201 atacactctg tgtggggcgt gctagtggat agtcatgtat gtttgagatg 4251 ggttgtaggc ccatcccgcc c