Sequence of DPV Melon necrotic spot virus
Melon necrotic spot virus CP gene for coat protein, complete cds, isolate: Kouchi.
ACC No: AB189943
Dated: 2009-10-08 | Length: 4271 | CRC: -383261299
ID AB189943; SV 1; linear; genomic RNA; STD; VRL; 4271 BP.
XX
AC AB189943;
XX
DT 28-SEP-2005 (Rel. 85, Created)
DT 08-OCT-2009 (Rel. 102, Last updated, Version 2)
XX
DE Melon necrotic spot virus CP gene for coat protein, complete cds, isolate:
DE Kouchi.
XX
KW .
XX
OS Melon necrotic spot virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae;
OC Carmovirus.
XX
RN [1]
RP 1-4271
RA Omura T.;
RT ;
RL Submitted (06-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL Contact:Toshihiro Omura National Agricultural Research Center, Laboratory
RL of Virology; Kannondai, Tsukuba, Ibaraki 305-8666, Japan
XX
RN [2]
RA Kubo C., Nakazono-Nagaoka E., Hagiwara K., Kajihara H., Takeuchi S.,
RA Matsuo K., Ichiki T.U., Omura T.;
RT "New severe strains of Melon necrotic spot virus: symptomatology and
RT sequencing";
RL Plant Pathol. 54:615-620(2005).
XX
FH Key Location/Qualifiers
FH
FT source 1. .4271
FT /organism="Melon necrotic spot virus"
FT /isolate="Kouchi"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:11987"
FT CDS 2817. .3989
FT /codon_start=1
FT /transl_table=1
FT /gene="CP"
FT /product="coat protein"
FT /db_xref="GOA:Q3LHM1"
FT /db_xref="InterPro:IPR000937"
FT /db_xref="UniProtKB/TrEMBL:Q3LHM1"
FT /protein_id="BAE45292.1"
FT /translation="MAMIKRINNLPTVKLAKQALPLLTNPKIVNKAIDVVPLVVQGGQK
FT LSKAAKRLLGAYGGNISYTEGAKPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI
FT ASVLPSNDLTVNNGDVNIGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS
FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHSADSAPWAENVLVVPCDNTWRYMNDTNAV
FT DRKLVDFGQFLFATYSGAGATAHGDLYVEYAVEFKDPQPIAGMVCMFDRLVSFSEVGST
FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNATSIGSLTFTGNSKLVGNSLNVT
FT SSGASALTFTLNSTGVPNSSNSSFSVGTVVALTRVRMTITRCSPETAYLA"
XX
SQ Sequence 4271 BP; 1082 A; 890 C; 1059 G; 1240 T; 0 other;
ab189943 Length: 4271 08-OCT-2009 Type: N Check: 4016 ..
1 gggattactc tagccgaatc cccgactttc ttggtttctg tgagttagtt
51 cgtatattgg ttatctatct taactaatac aggttagcaa tggatactgg
101 tttgaaattt cttgtttctg gaggtttagc cacctcatct gttatcagga
151 aagtgagtgc tgtgagttca ttggattcgt cccttccttc atcgtctata
201 ctatctgcca ttcatgggtc ttggactagt gctatcagcc acgattgcag
251 caagattgcc aaggttgcca ccgtaattgg aattggttat ctcggggttc
301 ggattggtgc cgcatggtgt cgtcgtaccc ccggaatagc gaactctata
351 attacatatg gggaagaagt ggttgagcaa gtaaaggtgg atattgatga
401 agatgctgaa gaggagtccg atactggtga ggaaattgtg gttggcacga
451 taggtattgg tatacacaca aacgtcaacc ctgaagttcg agctaagcgc
501 agacatagat cgaggccatt cattaagaaa attgtgaatt taacgaaaaa
551 tcactttggt ggatgtcccg attcaagtaa atcgaacgtc atggctgtta
601 gtaaattcgt ttatgaacaa tgcaaacagc acaattgtct tccacatcag
651 acgagattga tcatgagtgt tgcagttcca ttggtgttaa gtcccgacat
701 gtacgacatt tccagtaaag ctctgttaaa cagcgagata ttaacagaaa
751 acagagctac actggaccgc ctcaaaactc ttgatgggtg gctgtcacat
801 ttagtgtgcc acccccttag cgcgaaggct tggaggcggg cgattgacaa
851 cttgtgtggt cttcctgatt ggaaggcctt caagttagtc aactaagggt
901 gcctagagga actcgctggg ttctgtactt cggtacggag agggacgcac
951 ccagacatga ccgagtttcc tcaggatcgt cccattaaga cacgcaaact
1001 gtattgtttg gggggagttg gaactagcgt gaagttcaat gtacacaata
1051 actctctagc caaccttcgg cgcggtctta tagaacgcgt tttctttgtt
1101 gaaaatgata agaaggaact agagcctgcc cctaaacccc ttagtggtgt
1151 gtttgaccgc ttaacctggt ttcgtcggaa actccataac atcgtgggta
1201 ctcattccag tattagtcca ggtcaattct tggatttcta tactggcagg
1251 aggcgtacaa tttatgaagg tgccgtgaag tcattggagg ggttaagtgt
1301 tcagagaagg gatgcctatt tgaaaacgtt tgttaaggcg gagaagatta
1351 acaccactag gaagcctgac ccagctccgc gggtcataca accgaggaac
1401 gtaagatata atgttgaggt tggtcgttat ctacgtaggt ttgagcatta
1451 cctctatcga ggaattgatg aaatctggaa tggccccaca ataattaaag
1501 gatacactgt cgagcaaatt gggaaaatcg ctcgcgatgc ttgggactct
1551 ttcgtgagcc ccgtagcaat cgggtttgat atgaagaggt tcgaccaaca
1601 tgtatcctcc gacgctctta aatgggaaca tagtgtttat cttgatgctt
1651 tttgccatga ttcttatctt gcagaattgt tggagtggca attagttaat
1701 aagggagtcg ggtatgccag tgatggaatg atcaaatata aggttgatgg
1751 gtgccggatg agtggtgata tgaatacagc tatgggtaac tgtctgattg
1801 cctgtgccat cacacatgac ttcttccgta gtcgtggcat cagggcgcgt
1851 ttgatgaaca atggtgatga ctgtgtcgta atatgtgaaa aagaatgtgc
1901 cgcggtggtt aaagccgaca tggtaaggca ctggagacaa ttcgggtttc
1951 aatgtgagct cgaatgcgac gcagaaatct tcgagcaaat tgagttttgt
2001 caaatgcggc ccgtgtacga cggggaaaaa tatgtgatgg tgcggaatcc
2051 attagtcagt ctgtctaaag attcatactc agtcggccct tggaatggaa
2101 tcaaccatgc acgcaagtgg gtaaatgccg taggcttgtg tggcttatcc
2151 ctcactggtg gtattcctgt tgtccaaagt tactataata tgatgattcg
2201 taacactcaa tccgtgaaca gttctggcat tcttcgagat gtcagttttg
2251 ctagcggatt tcgggagtta gcgcgattgg gtaacaggaa aagtggtgct
2301 atatcagaag acgcccgttt tagcttttat ctcgcatttg gcattactcc
2351 agatttacaa cgtgccatgg aaagtgacta tgatgctcat accatagagt
2401 ggggtttcgt gccccaggga aatcctagaa tacagccaat ctcatggact
2451 ctcaacgaac tgtagaacaa actagtcctc ggggaagaag taaagaacgt
2501 ggtgacagcg ggggaaaaca gaagaactca atggggcgaa agatagccaa
2551 tgatgctatc tctgaatcga agcagggggt tatgggtgct agcacataca
2601 ttgctgacaa aattaaggta accatcaact ttaattttta atgtatggct
2651 tgttaccgtt gtgactccag ccccggggat tactctggag ctctgcttat
2701 attatttatc tcatttgttt tcttctatat tacctcgctt agcccgcaag
2751 gaaatactta cgttcatcac ttcgataatt cttccgttaa aacgcaatac
2801 gtcggcatct ctacaaatgg cgatgattaa acgcattaat aatttaccaa
2851 cagtgaagct tgctaagcag gccctgcccc tgctaacgaa tcctaaaatt
2901 gtgaataagg ctatagatgt ggttcctttg gtcgtccaag gtggtcagaa
2951 attgtccaaa gctgccaagc ggttgcttgg cgcttatggt ggtaatattt
3001 cttacactga gggcgctaag cctggtgcaa tatccgcccc agttgccatt
3051 agtaggcgag tggcgggtat gaagcctagg tttgttcgat ccgaaggatc
3101 agtgaagata gttcataggg agtttattgc ctctgttctt ccgtcaaatg
3151 atctcaccgt gaataatggt gatgtcaaca tcggtaagta tagggtcaat
3201 cccagtaata atgctttatt cacatggctt cagggacaag cgcaattata
3251 tgatatgtac agatttactc gactccgatt tacctatata ccaactaccg
3301 ggtccacttc cacaggtcgt gtttctattc tctgggatag agactctcag
3351 gatcccctcc ccattgatcg cgccgctatt agttcttatg ctcattccgc
3401 tgattcagcg ccttgggcag agaacgtttt agtggttccg tgtgacaaca
3451 cgtggaggta tatgaatgat accaatgcag tggatcggaa gttggttgat
3501 tttgggcagt ttctctttgc tacttattct ggtgctggtg ccaccgccca
3551 tggtgatctc tatgttgagt acgctgttga attcaaagat ccccagccaa
3601 ttgctggaat ggtttgtatg tttgatcgct tggtttcttt ctctgaagtc
3651 ggatctacaa ttaaaggagt caactacatt gctgatcgtg atgtgataac
3701 tactgggggt aatattggtg ttaacatcaa cattcccggg acttatctcg
3751 tcacgattgt tcttaatgcc acatcaattg gctcccttac cttcactggc
3801 aattctaaac tcgtaggcaa tagtcttaac gttaccagca gtggcgcttc
3851 tgctctcaca ttcaccctta actctactgg ggtgcccaac agttccaatt
3901 cttcattctc tgtgggcact gtcgttgcgt taactagggt tcgtatgacg
3951 atcactcgct gctctcctga aactgcctac ctcgcctagt atgaaataac
4001 tacactccaa aatctggtct cccttattcc tacctgttct cagccagatc
4051 tctgttctgg tgtcctatag gtgtccttgt cgtgtgtagt gcggtctggc
4101 taaccgtaac ggcgtatcgg ctcggttctt cgatgattag gctccgggat
4151 gtacgacata gctgaagatg gatggcgttc ggtggatcac cgctagcaaa
4201 atacactctg tgtggggcgt gctagtggat agtcatgtat gtttgagatg
4251 ggttgtaggc ccatcccgcc c